RNA–Protein interactions for RNA: ENST00000564993.1

PKM-213, Transcript of pyruvate kinase M1/2, humanhuman

TSL 2

Gene PKM, Length 663 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKM-213ENST00000564993 KRTAP2-4Q9BYR9 128 aa4.49□□□□□ -1.69
PKM-213ENST00000564993 KMT2DO14686 5537 aa4.48□□□□□ -1.69
PKM-213ENST00000564993 KRTAP4-8A0A0G2JLE6 195 aa4.43□□□□□ -1.7
PKM-213ENST00000564993 SPRR2FQ96RM1 72 aa4.43□□□□□ -1.7
PKM-213ENST00000564993 KRTAP4-8Q9BYQ9 185 aa4.43□□□□□ -1.7
PKM-213ENST00000564993 TNP1P09430 55 aa4.41□□□□□ -1.7
PKM-213ENST00000564993 SPRR2EP22531 72 aa4.4□□□□□ -1.71
PKM-213ENST00000564993 SPRR2BP35325 72 aa4.4□□□□□ -1.71
PKM-213ENST00000564993 SPRR2AP35326 72 aa4.4□□□□□ -1.71
PKM-213ENST00000564993 LOC100996750A0A140TA64 210 aa4.39□□□□□ -1.71
PKM-213ENST00000564993 KRTAP4-6Q9BYQ5 205 aa4.39□□□□□ -1.71
PKM-213ENST00000564993 KRTAP2-2Q9BYT5 123 aa4.34□□□□□ -1.71
PKM-213ENST00000564993 KRTAP2-1Q9BYU5 128 aa4.34□□□□□ -1.71
PKM-213ENST00000564993 LCE1AQ5T7P2 110 aa4.29□□□□□ -1.72
PKM-213ENST00000564993 SPRR2DP22532 72 aa4.26□□□□□ -1.73
PKM-213ENST00000564993 KRTAP19-7Q3SYF9 63 aa4.26□□□□□ -1.73
PKM-213ENST00000564993 MT1EP04732 61 aa4.21□□□□□ -1.74
PKM-213ENST00000564993 LCE3AQ5TA76 89 aa4.21□□□□□ -1.74
PKM-213ENST00000564993 KRTAP19-4Q3LI73 84 aa4.2□□□□□ -1.74
PKM-213ENST00000564993 KRTAP19-5Q3LI72 72 aa4.19□□□□□ -1.74
PKM-213ENST00000564993 KRTAP4-12Q9BQ66 201 aa4.17□□□□□ -1.74
PKM-213ENST00000564993 KRTAP19-3Q7Z4W3 81 aa4.16□□□□□ -1.74
PKM-213ENST00000564993 LCE3BQ5TA77 95 aa4.15□□□□□ -1.75
PKM-213ENST00000564993 LCE5AQ5TCM9 118 aa4.14□□□□□ -1.75
PKM-213ENST00000564993 MT1GP13640 62 aa4.12□□□□□ -1.75
PKM-213ENST00000564993 KRTAP12-3P60328 96 aa4.11□□□□□ -1.75
PKM-213ENST00000564993 MT1LQ93083 61 aa4.06□□□□□ -1.76
PKM-213ENST00000564993 LCE4AQ5TA78 99 aa4.04□□□□□ -1.76
PKM-213ENST00000564993 GPR98Q8WXG9 6306 aa4.03□□□□□ -1.76
PKM-213ENST00000564993 MT1MQ8N339 61 aa4□□□□□ -1.77
PKM-213ENST00000564993 DSTQ03001 7570 aaKnown RBP3.93□□□□□ -1.78
PKM-213ENST00000564993 KRTAP4-9Q9BYQ8 210 aa3.92□□□□□ -1.78
PKM-213ENST00000564993 KRTAP9-9Q9BYP9 154 aa3.91□□□□□ -1.78
PKM-213ENST00000564993 KRTAP9-4Q9BYQ2 154 aa3.91□□□□□ -1.78
PKM-213ENST00000564993 LCE3CQ5T5A8 94 aa3.8□□□□□ -1.8
PKM-213ENST00000564993 KRTAP4-3Q9BYR4 195 aa3.8□□□□□ -1.8
PKM-213ENST00000564993 LCE1DQ5T752 114 aa3.79□□□□□ -1.8
PKM-213ENST00000564993 KRTAP4-7Q9BYR0 210 aa3.79□□□□□ -1.8
PKM-213ENST00000564993 MT4P47944 62 aa3.75□□□□□ -1.81
PKM-213ENST00000564993 HMCN1Q96RW7 5635 aa3.74□□□□□ -1.81
PKM-213ENST00000564993 KRTAP5-4Q6L8H1 288 aa3.71□□□□□ -1.82
PKM-213ENST00000564993 AHNAK2Q8IVF2 5795 aa3.67□□□□□ -1.82
PKM-213ENST00000564993 KRTAP5-5Q701N2 237 aaPredicted RBP3.66□□□□□ -1.82
PKM-213ENST00000564993 KRTAP5-10Q6L8G5 202 aa3.63□□□□□ -1.83
PKM-213ENST00000564993 KRTAP12-4P60329 112 aa3.55□□□□□ -1.84
PKM-213ENST00000564993 KRTAP5-7Q6L8G8 165 aa3.55□□□□□ -1.84
PKM-213ENST00000564993 KRTAP4-11Q9BYQ6 195 aa3.52□□□□□ -1.85
PKM-213ENST00000564993 KRTAP9-6A8MVA2 160 aa3.51□□□□□ -1.85
PKM-213ENST00000564993 KRTAP5-3Q6L8H2 238 aa3.5□□□□□ -1.85
PKM-213ENST00000564993 MT1AP04731 61 aa3.49□□□□□ -1.85
PKM-213ENST00000564993 KRTAP20-2Q3LI61 65 aa3.46□□□□□ -1.86
PKM-213ENST00000564993 KRTAP4-2Q9BYR5 136 aa3.45□□□□□ -1.86
PKM-213ENST00000564993 SYNE1Q8NF91 8797 aaKnown RBP3.41□□□□□ -1.86
PKM-213ENST00000564993 KRTAP6-1Q3LI64 71 aa3.4□□□□□ -1.87
PKM-213ENST00000564993 KRTAP5-2Q701N4 177 aa3.29□□□□□ -1.88
PKM-213ENST00000564993 KRTAP6-2Q3LI66 62 aa3.21□□□□□ -1.9
PKM-213ENST00000564993 MT3P25713 68 aa3.2□□□□□ -1.9
PKM-213ENST00000564993 MUC5BQ9HC84 5762 aaPredicted RBP3.09□□□□□ -1.91
PKM-213ENST00000564993 MUC5ACP98088 5654 aa3.08□□□□□ -1.92
PKM-213ENST00000564993 AHNAKQ09666 5890 aaKnown RBP3.08□□□□□ -1.92
PKM-213ENST00000564993 KRTAP5-8O75690 187 aa3.06□□□□□ -1.92
PKM-213ENST00000564993 OBSCNQ5VST9 7968 aa2.96□□□□□ -1.94
PKM-213ENST00000564993 LCE1EQ5T753 118 aa2.92□□□□□ -1.94
PKM-213ENST00000564993 LCE3EQ5T5B0 92 aa2.89□□□□□ -1.95
PKM-213ENST00000564993 KRTAP5-1Q6L8H4 278 aa2.88□□□□□ -1.95
PKM-213ENST00000564993 LCE3DQ9BYE3 92 aa2.85□□□□□ -1.95
PKM-213ENST00000564993 LCE1FQ5T754 118 aa2.77□□□□□ -1.97
PKM-213ENST00000564993 PRM1P04553 51 aa2.74□□□□□ -1.97
PKM-213ENST00000564993 LCE1CQ5T751 118 aa2.69□□□□□ -1.98
PKM-213ENST00000564993 LCE1BQ5T7P3 118 aa2.69□□□□□ -1.98
PKM-213ENST00000564993 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.5□□□□□ -2.01
PKM-213ENST00000564993 KRTAP5-11Q6L8G4 156 aa2.42□□□□□ -2.02
PKM-213ENST00000564993 KRTAP21-2Q3LI59 83 aa2.26□□□□□ -2.05
PKM-213ENST00000564993 PHGR1C9JFL3 82 aa2.2□□□□□ -2.06
PKM-213ENST00000564993 KRTAP21-1Q3LI58 79 aa1.96□□□□□ -2.1
PKM-213ENST00000564993 KRTAP4-4Q9BYR3 166 aa1.95□□□□□ -2.1
PKM-213ENST00000564993 MUC19Q7Z5P9 8384 aa1.81□□□□□ -2.12
PKM-213ENST00000564993 MUC16Q8WXI7 14507 aa1.29□□□□□ -2.2
Retrieved 78 of 20,778 RNA–protein pairs in 13.2 ms