RNA–Protein interactions for RNA: ENST00000564834.1

LINC01003-201, Transcript of long intergenic non-protein coding RNA 1003, humanhuman

BASIC

Gene LINC01003, Length 1,764 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01003-201ENST00000564834 KRTAP9-7A8MTY7 169 aa8.89□□□□□ -0.99
LINC01003-201ENST00000564834 SYNE2Q8WXH0 6885 aaKnown RBP8.86□□□□□ -0.99
LINC01003-201ENST00000564834 SPRR2FQ96RM1 72 aa8.76□□□□□ -1.01
LINC01003-201ENST00000564834 MUC12Q9UKN1 5478 aa8.72□□□□□ -1.01
LINC01003-201ENST00000564834 KRTAP19-3Q7Z4W3 81 aa8.71□□□□□ -1.02
LINC01003-201ENST00000564834 KRTAP4-7Q9BYR0 210 aa8.69□□□□□ -1.02
LINC01003-201ENST00000564834 KRTAP5-9P26371 169 aa8.68□□□□□ -1.02
LINC01003-201ENST00000564834 KRTAP6-3Q3LI67 103 aa8.68□□□□□ -1.02
LINC01003-201ENST00000564834 MT1GP13640 62 aa8.63□□□□□ -1.03
LINC01003-201ENST00000564834 MT1MQ8N339 61 aa8.55□□□□□ -1.04
LINC01003-201ENST00000564834 LCE5AQ5TCM9 118 aa8.53□□□□□ -1.04
LINC01003-201ENST00000564834 KRTAP9-6A8MVA2 160 aa8.5□□□□□ -1.05
LINC01003-201ENST00000564834 MDN1Q9NU22 5596 aa8.46□□□□□ -1.06
LINC01003-201ENST00000564834 KRTAP4-3Q9BYR4 195 aa8.39□□□□□ -1.07
LINC01003-201ENST00000564834 LCE1AQ5T7P2 110 aa8.35□□□□□ -1.07
LINC01003-201ENST00000564834 A0A0A0MQY5 61 aa8.34□□□□□ -1.07
LINC01003-201ENST00000564834 SPRR2EP22531 72 aa8.3□□□□□ -1.08
LINC01003-201ENST00000564834 SPRR2BP35325 72 aa8.3□□□□□ -1.08
LINC01003-201ENST00000564834 SPRR2AP35326 72 aa8.3□□□□□ -1.08
LINC01003-201ENST00000564834 NEBP20929 6669 aa8.19□□□□□ -1.1
LINC01003-201ENST00000564834 LOC100996750A0A140TA64 210 aa8.15□□□□□ -1.1
LINC01003-201ENST00000564834 DSTQ03001 7570 aaKnown RBP8.04□□□□□ -1.12
LINC01003-201ENST00000564834 SPRR2DP22532 72 aa8□□□□□ -1.13
LINC01003-201ENST00000564834 KRTAP2-3P0C7H8 128 aa7.94□□□□□ -1.14
LINC01003-201ENST00000564834 KRTAP2-4Q9BYR9 128 aa7.94□□□□□ -1.14
LINC01003-201ENST00000564834 KRTAP2-1Q9BYU5 128 aa7.94□□□□□ -1.14
LINC01003-201ENST00000564834 KRTAP20-1Q3LI63 56 aa7.85□□□□□ -1.15
LINC01003-201ENST00000564834 INE1O15225 51 aa7.74□□□□□ -1.17
LINC01003-201ENST00000564834 LCE3BQ5TA77 95 aa7.71□□□□□ -1.17
LINC01003-201ENST00000564834 KRTAP5-5Q701N2 237 aaPredicted RBP7.69□□□□□ -1.18
LINC01003-201ENST00000564834 MT1AP04731 61 aa7.59□□□□□ -1.19
LINC01003-201ENST00000564834 KRTAP6-1Q3LI64 71 aa7.54□□□□□ -1.2
LINC01003-201ENST00000564834 KRTAP2-2Q9BYT5 123 aa7.54□□□□□ -1.2
LINC01003-201ENST00000564834 SYNE1Q8NF91 8797 aaKnown RBP7.27□□□□□ -1.25
LINC01003-201ENST00000564834 KRTAP5-4Q6L8H1 288 aa7.23□□□□□ -1.25
LINC01003-201ENST00000564834 KRTAP9-4Q9BYQ2 154 aa7.19□□□□□ -1.26
LINC01003-201ENST00000564834 LCE4AQ5TA78 99 aa7.1□□□□□ -1.27
LINC01003-201ENST00000564834 KRTAP12-4P60329 112 aa7.08□□□□□ -1.28
LINC01003-201ENST00000564834 KRTAP4-9Q9BYQ8 210 aa7□□□□□ -1.29
LINC01003-201ENST00000564834 MT4P47944 62 aa6.96□□□□□ -1.3
LINC01003-201ENST00000564834 LCE1DQ5T752 114 aa6.9□□□□□ -1.3
LINC01003-201ENST00000564834 KRTAP6-2Q3LI66 62 aa6.9□□□□□ -1.31
LINC01003-201ENST00000564834 KRTAP4-6Q9BYQ5 205 aa6.89□□□□□ -1.31
LINC01003-201ENST00000564834 MT3P25713 68 aa6.87□□□□□ -1.31
LINC01003-201ENST00000564834 HMCN1Q96RW7 5635 aa6.83□□□□□ -1.32
LINC01003-201ENST00000564834 LCE3DQ9BYE3 92 aa6.77□□□□□ -1.33
LINC01003-201ENST00000564834 KRTAP20-2Q3LI61 65 aa6.76□□□□□ -1.33
LINC01003-201ENST00000564834 LCE3EQ5T5B0 92 aa6.61□□□□□ -1.35
LINC01003-201ENST00000564834 KRTAP5-2Q701N4 177 aa6.61□□□□□ -1.35
LINC01003-201ENST00000564834 KRTAP5-3Q6L8H2 238 aa6.5□□□□□ -1.37
LINC01003-201ENST00000564834 OBSCNQ5VST9 7968 aa6.28□□□□□ -1.4
LINC01003-201ENST00000564834 AHNAK2Q8IVF2 5795 aa6.23□□□□□ -1.41
LINC01003-201ENST00000564834 GPR98Q8WXG9 6306 aa6.2□□□□□ -1.42
LINC01003-201ENST00000564834 KRTAP5-10Q6L8G5 202 aa6.07□□□□□ -1.44
LINC01003-201ENST00000564834 LCE1EQ5T753 118 aa5.91□□□□□ -1.46
LINC01003-201ENST00000564834 KRTAP4-11Q9BYQ6 195 aa5.91□□□□□ -1.46
LINC01003-201ENST00000564834 PRM1P04553 51 aa5.86□□□□□ -1.47
LINC01003-201ENST00000564834 KRTAP5-7Q6L8G8 165 aa5.75□□□□□ -1.49
LINC01003-201ENST00000564834 KRTAP5-8O75690 187 aa5.69□□□□□ -1.5
LINC01003-201ENST00000564834 KRTAP5-1Q6L8H4 278 aa5.68□□□□□ -1.5
LINC01003-201ENST00000564834 MUC5ACP98088 5654 aa5.56□□□□□ -1.52
LINC01003-201ENST00000564834 LCE1BQ5T7P3 118 aa5.55□□□□□ -1.52
LINC01003-201ENST00000564834 LCE1CQ5T751 118 aa5.52□□□□□ -1.53
LINC01003-201ENST00000564834 KRTAP4-2Q9BYR5 136 aa5.52□□□□□ -1.53
LINC01003-201ENST00000564834 KRTAP9-9Q9BYP9 154 aa5.27□□□□□ -1.57
LINC01003-201ENST00000564834 KRTAP5-6Q6L8G9 129 aaPredicted RBP5.19□□□□□ -1.58
LINC01003-201ENST00000564834 MUC5BQ9HC84 5762 aaPredicted RBP5.06□□□□□ -1.6
LINC01003-201ENST00000564834 KRTAP4-12Q9BQ66 201 aa5□□□□□ -1.61
LINC01003-201ENST00000564834 KRTAP21-2Q3LI59 83 aa4.93□□□□□ -1.62
LINC01003-201ENST00000564834 AHNAKQ09666 5890 aaKnown RBP4.92□□□□□ -1.62
LINC01003-201ENST00000564834 KRTAP5-11Q6L8G4 156 aa4.86□□□□□ -1.63
LINC01003-201ENST00000564834 KRTAP4-4Q9BYR3 166 aa4.36□□□□□ -1.71
LINC01003-201ENST00000564834 LCE1FQ5T754 118 aa4.33□□□□□ -1.72
LINC01003-201ENST00000564834 PHGR1C9JFL3 82 aa4.17□□□□□ -1.74
LINC01003-201ENST00000564834 MUC19Q7Z5P9 8384 aa3.72□□□□□ -1.81
LINC01003-201ENST00000564834 KRTAP21-1Q3LI58 79 aa3.67□□□□□ -1.82
LINC01003-201ENST00000564834 MUC16Q8WXI7 14507 aa2.7□□□□□ -1.98
Retrieved 77 of 20,778 RNA–protein pairs in 11.2 ms