RNA–Protein interactions for RNA: ENST00000563741.5

SPSB3-204, Transcript of splA/ryanodine receptor domain and SOCS box containing 3, humanhuman

TSL 5

Gene SPSB3, Length 1,746 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB3-204ENST00000563741 KRTAP19-5Q3LI72 72 aa7.21□□□□□ -1.25
SPSB3-204ENST00000563741 MDN1Q9NU22 5596 aa7.21□□□□□ -1.26
SPSB3-204ENST00000563741 KRTAP19-7Q3SYF9 63 aa7.19□□□□□ -1.26
SPSB3-204ENST00000563741 LCE1AQ5T7P2 110 aa7.18□□□□□ -1.26
SPSB3-204ENST00000563741 KRTAP12-3P60328 96 aa7.17□□□□□ -1.26
SPSB3-204ENST00000563741 KRTAP2-3P0C7H8 128 aa7.1□□□□□ -1.27
SPSB3-204ENST00000563741 KRTAP2-4Q9BYR9 128 aa7.1□□□□□ -1.27
SPSB3-204ENST00000563741 MT1EP04732 61 aa7.07□□□□□ -1.28
SPSB3-204ENST00000563741 SPRR2DP22532 72 aa7.02□□□□□ -1.29
SPSB3-204ENST00000563741 KRTAP15-1Q3LI76 137 aa6.96□□□□□ -1.3
SPSB3-204ENST00000563741 MT1LQ93083 61 aa6.9□□□□□ -1.3
SPSB3-204ENST00000563741 KRTAP2-2Q9BYT5 123 aa6.88□□□□□ -1.31
SPSB3-204ENST00000563741 KRTAP2-1Q9BYU5 128 aa6.88□□□□□ -1.31
SPSB3-204ENST00000563741 KRTAP19-3Q7Z4W3 81 aa6.83□□□□□ -1.32
SPSB3-204ENST00000563741 LCE3BQ5TA77 95 aa6.81□□□□□ -1.32
SPSB3-204ENST00000563741 LCE5AQ5TCM9 118 aa6.77□□□□□ -1.33
SPSB3-204ENST00000563741 MT1GP13640 62 aa6.73□□□□□ -1.33
SPSB3-204ENST00000563741 KRTAP19-4Q3LI73 84 aa6.69□□□□□ -1.34
SPSB3-204ENST00000563741 LCE3CQ5T5A8 94 aa6.67□□□□□ -1.34
SPSB3-204ENST00000563741 MT1MQ8N339 61 aa6.67□□□□□ -1.34
SPSB3-204ENST00000563741 KRTAP4-7Q9BYR0 210 aa6.66□□□□□ -1.34
SPSB3-204ENST00000563741 KRTAP4-3Q9BYR4 195 aa6.53□□□□□ -1.36
SPSB3-204ENST00000563741 SPRR5A0A1B0GTR4 108 aa6.47□□□□□ -1.37
SPSB3-204ENST00000563741 DSTQ03001 7570 aaKnown RBP6.45□□□□□ -1.38
SPSB3-204ENST00000563741 KRTAP9-6A8MVA2 160 aa6.34□□□□□ -1.39
SPSB3-204ENST00000563741 KRTAP4-9Q9BYQ8 210 aa6.28□□□□□ -1.4
SPSB3-204ENST00000563741 H3BS24 57 aa6.28□□□□□ -1.4
SPSB3-204ENST00000563741 LOC100996750A0A140TA64 210 aa6.25□□□□□ -1.41
SPSB3-204ENST00000563741 LCE4AQ5TA78 99 aa6.22□□□□□ -1.41
SPSB3-204ENST00000563741 LUZP6Q538Z0 58 aa6.22□□□□□ -1.41
SPSB3-204ENST00000563741 LCE1DQ5T752 114 aa6.16□□□□□ -1.42
SPSB3-204ENST00000563741 NDUFAF8A1L188 74 aa6.13□□□□□ -1.43
SPSB3-204ENST00000563741 KRTAP5-4Q6L8H1 288 aa6.13□□□□□ -1.43
SPSB3-204ENST00000563741 MT4P47944 62 aa6.11□□□□□ -1.43
SPSB3-204ENST00000563741 KRTAP5-5Q701N2 237 aaPredicted RBP6.05□□□□□ -1.44
SPSB3-204ENST00000563741 KRTAP4-6Q9BYQ5 205 aa5.96□□□□□ -1.46
SPSB3-204ENST00000563741 HMCN1Q96RW7 5635 aa5.95□□□□□ -1.46
SPSB3-204ENST00000563741 MT1AP04731 61 aa5.85□□□□□ -1.47
SPSB3-204ENST00000563741 GPR98Q8WXG9 6306 aa5.82□□□□□ -1.48
SPSB3-204ENST00000563741 KRTAP6-1Q3LI64 71 aa5.81□□□□□ -1.48
SPSB3-204ENST00000563741 KRTAP12-4P60329 112 aa5.79□□□□□ -1.48
SPSB3-204ENST00000563741 KRTAP20-2Q3LI61 65 aa5.77□□□□□ -1.49
SPSB3-204ENST00000563741 SYNE1Q8NF91 8797 aaKnown RBP5.71□□□□□ -1.49
SPSB3-204ENST00000563741 AHNAK2Q8IVF2 5795 aa5.67□□□□□ -1.5
SPSB3-204ENST00000563741 KRTAP5-10Q6L8G5 202 aa5.64□□□□□ -1.51
SPSB3-204ENST00000563741 A0A0A0MQY5 61 aa5.62□□□□□ -1.51
SPSB3-204ENST00000563741 KRTAP5-3Q6L8H2 238 aa5.6□□□□□ -1.51
SPSB3-204ENST00000563741 KRTAP9-4Q9BYQ2 154 aa5.57□□□□□ -1.52
SPSB3-204ENST00000563741 KRTAP5-7Q6L8G8 165 aa5.41□□□□□ -1.54
SPSB3-204ENST00000563741 KRTAP5-2Q701N4 177 aa5.4□□□□□ -1.55
SPSB3-204ENST00000563741 KRTAP6-2Q3LI66 62 aa5.39□□□□□ -1.55
SPSB3-204ENST00000563741 MT3P25713 68 aa5.3□□□□□ -1.56
SPSB3-204ENST00000563741 KRTAP4-11Q9BYQ6 195 aa5.23□□□□□ -1.57
SPSB3-204ENST00000563741 KRTAP5-8O75690 187 aa5.05□□□□□ -1.6
SPSB3-204ENST00000563741 INE1O15225 51 aa5.03□□□□□ -1.6
SPSB3-204ENST00000563741 OBSCNQ5VST9 7968 aa4.97□□□□□ -1.61
SPSB3-204ENST00000563741 LCE3DQ9BYE3 92 aa4.97□□□□□ -1.61
SPSB3-204ENST00000563741 LCE3EQ5T5B0 92 aa4.8□□□□□ -1.64
SPSB3-204ENST00000563741 KRTAP5-1Q6L8H4 278 aa4.8□□□□□ -1.64
SPSB3-204ENST00000563741 KRTAP9-9Q9BYP9 154 aa4.78□□□□□ -1.64
SPSB3-204ENST00000563741 LCE1EQ5T753 118 aa4.68□□□□□ -1.66
SPSB3-204ENST00000563741 MUC5ACP98088 5654 aa4.62□□□□□ -1.67
SPSB3-204ENST00000563741 MUC5BQ9HC84 5762 aaPredicted RBP4.61□□□□□ -1.67
SPSB3-204ENST00000563741 AHNAKQ09666 5890 aaKnown RBP4.57□□□□□ -1.68
SPSB3-204ENST00000563741 KRTAP4-2Q9BYR5 136 aa4.39□□□□□ -1.71
SPSB3-204ENST00000563741 LCE1BQ5T7P3 118 aa4.38□□□□□ -1.71
SPSB3-204ENST00000563741 LCE1CQ5T751 118 aa4.35□□□□□ -1.71
SPSB3-204ENST00000563741 PRM1P04553 51 aa4.1□□□□□ -1.75
SPSB3-204ENST00000563741 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.06□□□□□ -1.76
SPSB3-204ENST00000563741 KRTAP4-12Q9BQ66 201 aa3.92□□□□□ -1.78
SPSB3-204ENST00000563741 KRTAP5-11Q6L8G4 156 aa3.91□□□□□ -1.78
SPSB3-204ENST00000563741 KRTAP21-2Q3LI59 83 aa3.81□□□□□ -1.8
SPSB3-204ENST00000563741 LCE1FQ5T754 118 aa3.78□□□□□ -1.8
SPSB3-204ENST00000563741 KRTAP4-4Q9BYR3 166 aa3.39□□□□□ -1.87
SPSB3-204ENST00000563741 PHGR1C9JFL3 82 aa3.37□□□□□ -1.87
SPSB3-204ENST00000563741 MUC19Q7Z5P9 8384 aa3□□□□□ -1.93
SPSB3-204ENST00000563741 KRTAP21-1Q3LI58 79 aa2.5□□□□□ -2.01
SPSB3-204ENST00000563741 MUC16Q8WXI7 14507 aa2.24□□□□□ -2.05
Retrieved 78 of 20,778 RNA–protein pairs in 10.7 ms