RNA–Protein interactions for RNA: ENST00000562624.2

LINC02249-202, Transcript of long intergenic non-protein coding RNA 2249, humanhuman

TSL 1 (best) BASIC

Gene LINC02249, Length 4,260 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02249-202ENST00000562624 KRTAP19-6Q3LI70 58 aa2.58□□□□□ -2
LINC02249-202ENST00000562624 MACF1Q9UPN3 7388 aaKnown RBP2.56□□□□□ -2
LINC02249-202ENST00000562624 FCGBPQ9Y6R7 5405 aaPredicted RBP2.56□□□□□ -2
LINC02249-202ENST00000562624 KMT2DO14686 5537 aa2.56□□□□□ -2
LINC02249-202ENST00000562624 KRTAP9-9Q9BYP9 154 aa2.56□□□□□ -2
LINC02249-202ENST00000562624 KRTAP9-4Q9BYQ2 154 aa2.56□□□□□ -2
LINC02249-202ENST00000562624 DSTQ03001 7570 aaKnown RBP2.54□□□□□ -2
LINC02249-202ENST00000562624 KRTAP19-5Q3LI72 72 aa2.54□□□□□ -2
LINC02249-202ENST00000562624 SPRR2EP22531 72 aa2.53□□□□□ -2
LINC02249-202ENST00000562624 SPRR2BP35325 72 aa2.53□□□□□ -2
LINC02249-202ENST00000562624 SPRR2AP35326 72 aa2.53□□□□□ -2
LINC02249-202ENST00000562624 KRTAP9-7A8MTY7 169 aa2.51□□□□□ -2.01
LINC02249-202ENST00000562624 LCE3CQ5T5A8 94 aa2.5□□□□□ -2.01
LINC02249-202ENST00000562624 LCE4AQ5TA78 99 aa2.48□□□□□ -2.01
LINC02249-202ENST00000562624 OBSCNQ5VST9 7968 aa2.47□□□□□ -2.01
LINC02249-202ENST00000562624 KRTAP4-7Q9BYR0 210 aa2.47□□□□□ -2.01
LINC02249-202ENST00000562624 MUC12Q9UKN1 5478 aa2.44□□□□□ -2.02
LINC02249-202ENST00000562624 SPRR2DP22532 72 aa2.43□□□□□ -2.02
LINC02249-202ENST00000562624 KRTAP4-9Q9BYQ8 210 aa2.42□□□□□ -2.02
LINC02249-202ENST00000562624 SYNE1Q8NF91 8797 aaKnown RBP2.41□□□□□ -2.02
LINC02249-202ENST00000562624 LCE5AQ5TCM9 118 aa2.4□□□□□ -2.03
LINC02249-202ENST00000562624 KRTAP4-11Q9BYQ6 195 aa2.36□□□□□ -2.03
LINC02249-202ENST00000562624 KRTAP12-4P60329 112 aa2.34□□□□□ -2.03
LINC02249-202ENST00000562624 MT1EP04732 61 aa2.34□□□□□ -2.03
LINC02249-202ENST00000562624 KRTAP6-3Q3LI67 103 aa2.34□□□□□ -2.03
LINC02249-202ENST00000562624 KRTAP19-3Q7Z4W3 81 aa2.33□□□□□ -2.04
LINC02249-202ENST00000562624 MT1GP13640 62 aa2.32□□□□□ -2.04
LINC02249-202ENST00000562624 KRTAP19-7Q3SYF9 63 aa2.31□□□□□ -2.04
LINC02249-202ENST00000562624 KRTAP4-3Q9BYR4 195 aa2.31□□□□□ -2.04
LINC02249-202ENST00000562624 MDN1Q9NU22 5596 aa2.31□□□□□ -2.04
LINC02249-202ENST00000562624 MT1LQ93083 61 aa2.3□□□□□ -2.04
LINC02249-202ENST00000562624 KRTAP4-2Q9BYR5 136 aa2.28□□□□□ -2.04
LINC02249-202ENST00000562624 LCE1AQ5T7P2 110 aa2.26□□□□□ -2.05
LINC02249-202ENST00000562624 KRTAP20-1Q3LI63 56 aa2.25□□□□□ -2.05
LINC02249-202ENST00000562624 MT1MQ8N339 61 aa2.25□□□□□ -2.05
LINC02249-202ENST00000562624 MT4P47944 62 aa2.22□□□□□ -2.05
LINC02249-202ENST00000562624 KRTAP5-9P26371 169 aa2.21□□□□□ -2.06
LINC02249-202ENST00000562624 KRTAP2-3P0C7H8 128 aa2.19□□□□□ -2.06
LINC02249-202ENST00000562624 KRTAP2-4Q9BYR9 128 aa2.19□□□□□ -2.06
LINC02249-202ENST00000562624 KRTAP2-1Q9BYU5 128 aa2.19□□□□□ -2.06
LINC02249-202ENST00000562624 KRTAP5-3Q6L8H2 238 aa2.19□□□□□ -2.06
LINC02249-202ENST00000562624 NEBP20929 6669 aa2.17□□□□□ -2.06
LINC02249-202ENST00000562624 LCE3EQ5T5B0 92 aa2.14□□□□□ -2.07
LINC02249-202ENST00000562624 LCE3DQ9BYE3 92 aa2.14□□□□□ -2.07
LINC02249-202ENST00000562624 KRTAP2-2Q9BYT5 123 aa2.12□□□□□ -2.07
LINC02249-202ENST00000562624 MT3P25713 68 aa2.09□□□□□ -2.07
LINC02249-202ENST00000562624 PRM1P04553 51 aa2.07□□□□□ -2.08
LINC02249-202ENST00000562624 KRTAP9-6A8MVA2 160 aa2.06□□□□□ -2.08
LINC02249-202ENST00000562624 KRTAP6-1Q3LI64 71 aa1.97□□□□□ -2.09
LINC02249-202ENST00000562624 MT1AP04731 61 aa1.95□□□□□ -2.1
LINC02249-202ENST00000562624 KRTAP6-2Q3LI66 62 aa1.91□□□□□ -2.1
LINC02249-202ENST00000562624 GPR98Q8WXG9 6306 aa1.86□□□□□ -2.11
LINC02249-202ENST00000562624 LCE1BQ5T7P3 118 aa1.83□□□□□ -2.12
LINC02249-202ENST00000562624 HMCN1Q96RW7 5635 aa1.83□□□□□ -2.12
LINC02249-202ENST00000562624 KRTAP20-2Q3LI61 65 aa1.82□□□□□ -2.12
LINC02249-202ENST00000562624 KRTAP5-4Q6L8H1 288 aa1.8□□□□□ -2.12
LINC02249-202ENST00000562624 KRTAP5-5Q701N2 237 aaPredicted RBP1.76□□□□□ -2.13
LINC02249-202ENST00000562624 MUC5ACP98088 5654 aa1.68□□□□□ -2.14
LINC02249-202ENST00000562624 MUC19Q7Z5P9 8384 aa1.66□□□□□ -2.14
LINC02249-202ENST00000562624 LCE1EQ5T753 118 aa1.64□□□□□ -2.15
LINC02249-202ENST00000562624 AHNAK2Q8IVF2 5795 aa1.62□□□□□ -2.15
LINC02249-202ENST00000562624 KRTAP5-2Q701N4 177 aa1.6□□□□□ -2.15
LINC02249-202ENST00000562624 KRTAP5-10Q6L8G5 202 aa1.54□□□□□ -2.16
LINC02249-202ENST00000562624 KRTAP5-8O75690 187 aa1.53□□□□□ -2.16
LINC02249-202ENST00000562624 KRTAP5-7Q6L8G8 165 aa1.52□□□□□ -2.17
LINC02249-202ENST00000562624 KRTAP5-11Q6L8G4 156 aa1.49□□□□□ -2.17
LINC02249-202ENST00000562624 MUC5BQ9HC84 5762 aaPredicted RBP1.48□□□□□ -2.17
LINC02249-202ENST00000562624 LCE1CQ5T751 118 aa1.47□□□□□ -2.17
LINC02249-202ENST00000562624 LCE1FQ5T754 118 aa1.47□□□□□ -2.17
LINC02249-202ENST00000562624 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.43□□□□□ -2.18
LINC02249-202ENST00000562624 KRTAP4-4Q9BYR3 166 aa1.4□□□□□ -2.19
LINC02249-202ENST00000562624 KRTAP5-1Q6L8H4 278 aa1.39□□□□□ -2.19
LINC02249-202ENST00000562624 AHNAKQ09666 5890 aaKnown RBP1.34□□□□□ -2.19
LINC02249-202ENST00000562624 KRTAP21-2Q3LI59 83 aa1.15□□□□□ -2.23
LINC02249-202ENST00000562624 PHGR1C9JFL3 82 aa1.13□□□□□ -2.23
LINC02249-202ENST00000562624 KRTAP21-1Q3LI58 79 aa1.1□□□□□ -2.23
LINC02249-202ENST00000562624 MUC16Q8WXI7 14507 aa0.7□□□□□ -2.3
Retrieved 77 of 20,778 RNA–protein pairs in 75 ms