RNA–Protein interactions for RNA: ENST00000562212.5

SCAMP5-203, Transcript of secretory carrier membrane protein 5, humanhuman

TSL 1 (best) BASIC

Gene SCAMP5, Length 3,400 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP5-203ENST00000562212 KRTAP4-3Q9BYR4 195 aa4.37□□□□□ -1.71
SCAMP5-203ENST00000562212 LOC100996750A0A140TA64 210 aa4.31□□□□□ -1.72
SCAMP5-203ENST00000562212 SYNE2Q8WXH0 6885 aaKnown RBP4.27□□□□□ -1.73
SCAMP5-203ENST00000562212 MT1LQ93083 61 aa4.26□□□□□ -1.73
SCAMP5-203ENST00000562212 MT1EP04732 61 aa4.26□□□□□ -1.73
SCAMP5-203ENST00000562212 MT1GP13640 62 aa4.26□□□□□ -1.73
SCAMP5-203ENST00000562212 SPRR2FQ96RM1 72 aa4.23□□□□□ -1.73
SCAMP5-203ENST00000562212 MACF1Q9UPN3 7388 aaKnown RBP4.23□□□□□ -1.73
SCAMP5-203ENST00000562212 KRTAP19-6Q3LI70 58 aa4.14□□□□□ -1.75
SCAMP5-203ENST00000562212 MDN1Q9NU22 5596 aa4.07□□□□□ -1.76
SCAMP5-203ENST00000562212 KRTAP19-3Q7Z4W3 81 aa4.02□□□□□ -1.77
SCAMP5-203ENST00000562212 MT1MQ8N339 61 aa4.02□□□□□ -1.77
SCAMP5-203ENST00000562212 LCE3BQ5TA77 95 aa4□□□□□ -1.77
SCAMP5-203ENST00000562212 KRTAP4-9Q9BYQ8 210 aa3.94□□□□□ -1.78
SCAMP5-203ENST00000562212 KRTAP9-2Q9BYQ4 174 aa3.93□□□□□ -1.78
SCAMP5-203ENST00000562212 KRTAP2-3P0C7H8 128 aa3.92□□□□□ -1.78
SCAMP5-203ENST00000562212 KRTAP2-4Q9BYR9 128 aa3.92□□□□□ -1.78
SCAMP5-203ENST00000562212 KRTAP2-1Q9BYU5 128 aa3.92□□□□□ -1.78
SCAMP5-203ENST00000562212 KRTAP12-4P60329 112 aa3.83□□□□□ -1.8
SCAMP5-203ENST00000562212 SPRR2EP22531 72 aa3.82□□□□□ -1.8
SCAMP5-203ENST00000562212 SPRR2BP35325 72 aa3.82□□□□□ -1.8
SCAMP5-203ENST00000562212 SPRR2AP35326 72 aa3.82□□□□□ -1.8
SCAMP5-203ENST00000562212 LCE5AQ5TCM9 118 aa3.8□□□□□ -1.8
SCAMP5-203ENST00000562212 KRTAP19-4Q3LI73 84 aa3.78□□□□□ -1.8
SCAMP5-203ENST00000562212 KRTAP6-1Q3LI64 71 aa3.72□□□□□ -1.81
SCAMP5-203ENST00000562212 LCE1AQ5T7P2 110 aa3.68□□□□□ -1.82
SCAMP5-203ENST00000562212 SPRR2DP22532 72 aa3.63□□□□□ -1.83
SCAMP5-203ENST00000562212 LCE4AQ5TA78 99 aa3.58□□□□□ -1.84
SCAMP5-203ENST00000562212 LCE3DQ9BYE3 92 aa3.55□□□□□ -1.84
SCAMP5-203ENST00000562212 KRTAP9-6A0A140TA67 174 aa3.51□□□□□ -1.85
SCAMP5-203ENST00000562212 MT1AP04731 61 aa3.51□□□□□ -1.85
SCAMP5-203ENST00000562212 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.47□□□□□ -1.85
SCAMP5-203ENST00000562212 KRTAP9-7A8MTY7 169 aa3.47□□□□□ -1.85
SCAMP5-203ENST00000562212 LCE3EQ5T5B0 92 aa3.45□□□□□ -1.86
SCAMP5-203ENST00000562212 KRTAP5-9P26371 169 aa3.43□□□□□ -1.86
SCAMP5-203ENST00000562212 MT4P47944 62 aa3.42□□□□□ -1.86
SCAMP5-203ENST00000562212 KRTAP6-2Q3LI66 62 aa3.41□□□□□ -1.86
SCAMP5-203ENST00000562212 KRTAP9-4Q9BYQ2 154 aa3.41□□□□□ -1.86
SCAMP5-203ENST00000562212 PRM1P04553 51 aa3.39□□□□□ -1.87
SCAMP5-203ENST00000562212 KRTAP9-9Q9BYP9 154 aa3.37□□□□□ -1.87
SCAMP5-203ENST00000562212 KRTAP6-3Q3LI67 103 aa3.31□□□□□ -1.88
SCAMP5-203ENST00000562212 KRTAP5-5Q701N2 237 aaPredicted RBP3.3□□□□□ -1.88
SCAMP5-203ENST00000562212 MT3P25713 68 aa3.25□□□□□ -1.89
SCAMP5-203ENST00000562212 KRTAP4-6Q9BYQ5 205 aa3.25□□□□□ -1.89
SCAMP5-203ENST00000562212 NEBP20929 6669 aa3.21□□□□□ -1.9
SCAMP5-203ENST00000562212 LCE1DQ5T752 114 aa3.07□□□□□ -1.92
SCAMP5-203ENST00000562212 HMCN1Q96RW7 5635 aa3.05□□□□□ -1.92
SCAMP5-203ENST00000562212 KRTAP4-12Q9BQ66 201 aa3.04□□□□□ -1.92
SCAMP5-203ENST00000562212 LCE1BQ5T7P3 118 aa3.02□□□□□ -1.93
SCAMP5-203ENST00000562212 KRTAP20-2Q3LI61 65 aa2.96□□□□□ -1.94
SCAMP5-203ENST00000562212 LCE1FQ5T754 118 aa2.94□□□□□ -1.94
SCAMP5-203ENST00000562212 KRTAP2-2Q9BYT5 123 aa2.91□□□□□ -1.94
SCAMP5-203ENST00000562212 MUC19Q7Z5P9 8384 aa2.91□□□□□ -1.94
SCAMP5-203ENST00000562212 KRTAP5-4Q6L8H1 288 aa2.89□□□□□ -1.95
SCAMP5-203ENST00000562212 KRTAP20-1Q3LI63 56 aa2.88□□□□□ -1.95
SCAMP5-203ENST00000562212 MUC5ACP98088 5654 aa2.88□□□□□ -1.95
SCAMP5-203ENST00000562212 LCE1EQ5T753 118 aa2.8□□□□□ -1.96
SCAMP5-203ENST00000562212 KRTAP4-11Q9BYQ6 195 aa2.67□□□□□ -1.98
SCAMP5-203ENST00000562212 KRTAP5-3Q6L8H2 238 aa2.66□□□□□ -1.98
SCAMP5-203ENST00000562212 KRTAP5-2Q701N4 177 aa2.66□□□□□ -1.98
SCAMP5-203ENST00000562212 KRTAP4-4Q9BYR3 166 aa2.55□□□□□ -2
SCAMP5-203ENST00000562212 MUC5BQ9HC84 5762 aaPredicted RBP2.51□□□□□ -2.01
SCAMP5-203ENST00000562212 AHNAK2Q8IVF2 5795 aa2.51□□□□□ -2.01
SCAMP5-203ENST00000562212 KRTAP4-2Q9BYR5 136 aa2.46□□□□□ -2.02
SCAMP5-203ENST00000562212 KRTAP5-10Q6L8G5 202 aa2.43□□□□□ -2.02
SCAMP5-203ENST00000562212 KRTAP5-1Q6L8H4 278 aa2.4□□□□□ -2.03
SCAMP5-203ENST00000562212 LCE1CQ5T751 118 aa2.32□□□□□ -2.04
SCAMP5-203ENST00000562212 KRTAP5-8O75690 187 aa2.31□□□□□ -2.04
SCAMP5-203ENST00000562212 GPR98Q8WXG9 6306 aa2.29□□□□□ -2.04
SCAMP5-203ENST00000562212 KRTAP21-2Q3LI59 83 aa2.26□□□□□ -2.05
SCAMP5-203ENST00000562212 KRTAP21-1Q3LI58 79 aa2.05□□□□□ -2.08
SCAMP5-203ENST00000562212 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.01□□□□□ -2.09
SCAMP5-203ENST00000562212 KRTAP5-7Q6L8G8 165 aa2□□□□□ -2.09
SCAMP5-203ENST00000562212 KRTAP5-11Q6L8G4 156 aa1.97□□□□□ -2.09
SCAMP5-203ENST00000562212 AHNAKQ09666 5890 aaKnown RBP1.9□□□□□ -2.1
SCAMP5-203ENST00000562212 PHGR1C9JFL3 82 aa1.75□□□□□ -2.13
SCAMP5-203ENST00000562212 MUC16Q8WXI7 14507 aa1.16□□□□□ -2.22
Retrieved 77 of 20,778 RNA–protein pairs in 103.9 ms