RNA–Protein interactions for RNA: ENST00000561864.1

AC055717.2-201, humanhuman

TSL 4 BASIC

Gene AC055717.2, Length 577 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055717.2-201ENST00000561864 KRTAP6-3Q3LI67 103 aa4.5□□□□□ -1.69
AC055717.2-201ENST00000561864 MT1LQ93083 61 aa4.48□□□□□ -1.69
AC055717.2-201ENST00000561864 KMT2DO14686 5537 aa4.44□□□□□ -1.7
AC055717.2-201ENST00000561864 KRTAP5-9P26371 169 aa4.39□□□□□ -1.71
AC055717.2-201ENST00000561864 NEBP20929 6669 aa4.34□□□□□ -1.72
AC055717.2-201ENST00000561864 SPRR2FQ96RM1 72 aa4.33□□□□□ -1.72
AC055717.2-201ENST00000561864 A0A0A0MQY5 61 aa4.32□□□□□ -1.72
AC055717.2-201ENST00000561864 KRTAP19-3Q7Z4W3 81 aa4.31□□□□□ -1.72
AC055717.2-201ENST00000561864 KRTAP4-7Q9BYR0 210 aa4.31□□□□□ -1.72
AC055717.2-201ENST00000561864 MUC12Q9UKN1 5478 aa4.3□□□□□ -1.72
AC055717.2-201ENST00000561864 MT1GP13640 62 aa4.29□□□□□ -1.72
AC055717.2-201ENST00000561864 KRTAP9-6A8MVA2 160 aa4.28□□□□□ -1.72
AC055717.2-201ENST00000561864 MDN1Q9NU22 5596 aa4.25□□□□□ -1.73
AC055717.2-201ENST00000561864 MT1MQ8N339 61 aa4.25□□□□□ -1.73
AC055717.2-201ENST00000561864 SPRR2EP22531 72 aa4.21□□□□□ -1.74
AC055717.2-201ENST00000561864 SPRR2BP35325 72 aa4.21□□□□□ -1.74
AC055717.2-201ENST00000561864 SPRR2AP35326 72 aa4.21□□□□□ -1.74
AC055717.2-201ENST00000561864 LCE5AQ5TCM9 118 aa4.2□□□□□ -1.74
AC055717.2-201ENST00000561864 LCE1AQ5T7P2 110 aa4.19□□□□□ -1.74
AC055717.2-201ENST00000561864 KRTAP4-3Q9BYR4 195 aa4.14□□□□□ -1.75
AC055717.2-201ENST00000561864 KRTAP2-3P0C7H8 128 aa4.11□□□□□ -1.75
AC055717.2-201ENST00000561864 KRTAP2-4Q9BYR9 128 aa4.11□□□□□ -1.75
AC055717.2-201ENST00000561864 KRTAP2-1Q9BYU5 128 aa4.11□□□□□ -1.75
AC055717.2-201ENST00000561864 SPRR2DP22532 72 aa4.06□□□□□ -1.76
AC055717.2-201ENST00000561864 KRTAP20-1Q3LI63 56 aa4.05□□□□□ -1.76
AC055717.2-201ENST00000561864 LOC100996750A0A140TA64 210 aa4.04□□□□□ -1.76
AC055717.2-201ENST00000561864 INE1O15225 51 aa4.03□□□□□ -1.76
AC055717.2-201ENST00000561864 KRTAP4-6Q9BYQ5 205 aa3.98□□□□□ -1.77
AC055717.2-201ENST00000561864 LCE3BQ5TA77 95 aa3.93□□□□□ -1.78
AC055717.2-201ENST00000561864 DSTQ03001 7570 aaKnown RBP3.91□□□□□ -1.78
AC055717.2-201ENST00000561864 KRTAP2-2Q9BYT5 123 aa3.91□□□□□ -1.78
AC055717.2-201ENST00000561864 MT1AP04731 61 aa3.82□□□□□ -1.8
AC055717.2-201ENST00000561864 KRTAP5-5Q701N2 237 aaPredicted RBP3.82□□□□□ -1.8
AC055717.2-201ENST00000561864 KRTAP6-1Q3LI64 71 aa3.75□□□□□ -1.81
AC055717.2-201ENST00000561864 KRTAP4-12Q9BQ66 201 aa3.61□□□□□ -1.83
AC055717.2-201ENST00000561864 KRTAP4-9Q9BYQ8 210 aa3.61□□□□□ -1.83
AC055717.2-201ENST00000561864 LCE4AQ5TA78 99 aa3.59□□□□□ -1.83
AC055717.2-201ENST00000561864 KRTAP9-4Q9BYQ2 154 aa3.59□□□□□ -1.83
AC055717.2-201ENST00000561864 KRTAP5-4Q6L8H1 288 aa3.58□□□□□ -1.84
AC055717.2-201ENST00000561864 MT4P47944 62 aa3.55□□□□□ -1.84
AC055717.2-201ENST00000561864 LCE1DQ5T752 114 aa3.54□□□□□ -1.84
AC055717.2-201ENST00000561864 KRTAP12-4P60329 112 aa3.49□□□□□ -1.85
AC055717.2-201ENST00000561864 HMCN1Q96RW7 5635 aa3.45□□□□□ -1.86
AC055717.2-201ENST00000561864 SYNE1Q8NF91 8797 aaKnown RBP3.45□□□□□ -1.86
AC055717.2-201ENST00000561864 LCE3DQ9BYE3 92 aa3.45□□□□□ -1.86
AC055717.2-201ENST00000561864 MT3P25713 68 aa3.44□□□□□ -1.86
AC055717.2-201ENST00000561864 KRTAP9-9Q9BYP9 154 aa3.44□□□□□ -1.86
AC055717.2-201ENST00000561864 KRTAP6-2Q3LI66 62 aa3.42□□□□□ -1.86
AC055717.2-201ENST00000561864 LCE3EQ5T5B0 92 aa3.39□□□□□ -1.87
AC055717.2-201ENST00000561864 KRTAP20-2Q3LI61 65 aa3.36□□□□□ -1.87
AC055717.2-201ENST00000561864 GPR98Q8WXG9 6306 aa3.29□□□□□ -1.88
AC055717.2-201ENST00000561864 KRTAP5-3Q6L8H2 238 aa3.26□□□□□ -1.89
AC055717.2-201ENST00000561864 KRTAP5-2Q701N4 177 aa3.26□□□□□ -1.89
AC055717.2-201ENST00000561864 AHNAK2Q8IVF2 5795 aa3.22□□□□□ -1.89
AC055717.2-201ENST00000561864 KRTAP5-10Q6L8G5 202 aa3.16□□□□□ -1.9
AC055717.2-201ENST00000561864 KRTAP4-11Q9BYQ6 195 aa3.11□□□□□ -1.91
AC055717.2-201ENST00000561864 KRTAP4-2Q9BYR5 136 aa3.1□□□□□ -1.91
AC055717.2-201ENST00000561864 PRM1P04553 51 aa3.05□□□□□ -1.92
AC055717.2-201ENST00000561864 OBSCNQ5VST9 7968 aa3.01□□□□□ -1.93
AC055717.2-201ENST00000561864 KRTAP5-7Q6L8G8 165 aa2.99□□□□□ -1.93
AC055717.2-201ENST00000561864 LCE1EQ5T753 118 aa2.94□□□□□ -1.94
AC055717.2-201ENST00000561864 KRTAP5-8O75690 187 aa2.91□□□□□ -1.94
AC055717.2-201ENST00000561864 KRTAP5-1Q6L8H4 278 aa2.81□□□□□ -1.96
AC055717.2-201ENST00000561864 LCE1CQ5T751 118 aa2.73□□□□□ -1.97
AC055717.2-201ENST00000561864 LCE1BQ5T7P3 118 aa2.73□□□□□ -1.97
AC055717.2-201ENST00000561864 MUC5ACP98088 5654 aa2.73□□□□□ -1.97
AC055717.2-201ENST00000561864 MUC5BQ9HC84 5762 aaPredicted RBP2.64□□□□□ -1.99
AC055717.2-201ENST00000561864 AHNAKQ09666 5890 aaKnown RBP2.61□□□□□ -1.99
AC055717.2-201ENST00000561864 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.6□□□□□ -1.99
AC055717.2-201ENST00000561864 KRTAP21-2Q3LI59 83 aa2.45□□□□□ -2.02
AC055717.2-201ENST00000561864 KRTAP5-11Q6L8G4 156 aa2.41□□□□□ -2.02
AC055717.2-201ENST00000561864 LCE1FQ5T754 118 aa2.18□□□□□ -2.06
AC055717.2-201ENST00000561864 KRTAP4-4Q9BYR3 166 aa2.13□□□□□ -2.07
AC055717.2-201ENST00000561864 PHGR1C9JFL3 82 aa2.05□□□□□ -2.08
AC055717.2-201ENST00000561864 KRTAP21-1Q3LI58 79 aa1.92□□□□□ -2.1
AC055717.2-201ENST00000561864 MUC19Q7Z5P9 8384 aa1.81□□□□□ -2.12
AC055717.2-201ENST00000561864 MUC16Q8WXI7 14507 aa1.31□□□□□ -2.2
Retrieved 77 of 20,778 RNA–protein pairs in 85.8 ms