RNA–Protein interactions for RNA: ENST00000561702.5

SPG7-203, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 2

Gene SPG7, Length 2,042 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-203ENST00000561702 MACF1Q9UPN3 7388 aaKnown RBP5.1□□□□□ -1.59
SPG7-203ENST00000561702 KRTAP9-6A0A140TA67 174 aa5.09□□□□□ -1.6
SPG7-203ENST00000561702 INE1O15225 51 aa5.07□□□□□ -1.6
SPG7-203ENST00000561702 MT1LQ93083 61 aa5.02□□□□□ -1.61
SPG7-203ENST00000561702 SPRR2FQ96RM1 72 aa5□□□□□ -1.61
SPG7-203ENST00000561702 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.96□□□□□ -1.62
SPG7-203ENST00000561702 SYNE2Q8WXH0 6885 aaKnown RBP4.95□□□□□ -1.62
SPG7-203ENST00000561702 KRTAP5-9P26371 169 aa4.94□□□□□ -1.62
SPG7-203ENST00000561702 MUC12Q9UKN1 5478 aa4.92□□□□□ -1.62
SPG7-203ENST00000561702 KRTAP9-6A8MVA2 160 aa4.92□□□□□ -1.62
SPG7-203ENST00000561702 KRTAP19-3Q7Z4W3 81 aa4.9□□□□□ -1.62
SPG7-203ENST00000561702 KRTAP4-7Q9BYR0 210 aa4.89□□□□□ -1.63
SPG7-203ENST00000561702 KRTAP4-12Q9BQ66 201 aa4.87□□□□□ -1.63
SPG7-203ENST00000561702 MT1GP13640 62 aa4.85□□□□□ -1.63
SPG7-203ENST00000561702 KRTAP6-3Q3LI67 103 aa4.84□□□□□ -1.64
SPG7-203ENST00000561702 LCE5AQ5TCM9 118 aa4.82□□□□□ -1.64
SPG7-203ENST00000561702 MT1MQ8N339 61 aa4.82□□□□□ -1.64
SPG7-203ENST00000561702 KRTAP2-3P0C7H8 128 aa4.82□□□□□ -1.64
SPG7-203ENST00000561702 KRTAP2-4Q9BYR9 128 aa4.82□□□□□ -1.64
SPG7-203ENST00000561702 KRTAP2-1Q9BYU5 128 aa4.82□□□□□ -1.64
SPG7-203ENST00000561702 LCE1AQ5T7P2 110 aa4.79□□□□□ -1.64
SPG7-203ENST00000561702 LCE4AQ5TA78 99 aa4.79□□□□□ -1.64
SPG7-203ENST00000561702 KRTAP9-7A8MTY7 169 aa4.77□□□□□ -1.65
SPG7-203ENST00000561702 KRTAP4-3Q9BYR4 195 aa4.76□□□□□ -1.65
SPG7-203ENST00000561702 SPRR2EP22531 72 aa4.74□□□□□ -1.65
SPG7-203ENST00000561702 SPRR2BP35325 72 aa4.74□□□□□ -1.65
SPG7-203ENST00000561702 SPRR2AP35326 72 aa4.74□□□□□ -1.65
SPG7-203ENST00000561702 MDN1Q9NU22 5596 aa4.7□□□□□ -1.66
SPG7-203ENST00000561702 LCE3BQ5TA77 95 aa4.7□□□□□ -1.66
SPG7-203ENST00000561702 KRTAP9-9Q9BYP9 154 aa4.57□□□□□ -1.68
SPG7-203ENST00000561702 KRTAP9-4Q9BYQ2 154 aa4.57□□□□□ -1.68
SPG7-203ENST00000561702 SPRR2DP22532 72 aa4.56□□□□□ -1.68
SPG7-203ENST00000561702 NEBP20929 6669 aa4.52□□□□□ -1.69
SPG7-203ENST00000561702 DSTQ03001 7570 aaKnown RBP4.5□□□□□ -1.69
SPG7-203ENST00000561702 LCE1DQ5T752 114 aa4.39□□□□□ -1.71
SPG7-203ENST00000561702 KRTAP5-5Q701N2 237 aaPredicted RBP4.34□□□□□ -1.71
SPG7-203ENST00000561702 MT1AP04731 61 aa4.26□□□□□ -1.73
SPG7-203ENST00000561702 KRTAP6-1Q3LI64 71 aa4.24□□□□□ -1.73
SPG7-203ENST00000561702 KRTAP4-9Q9BYQ8 210 aa4.2□□□□□ -1.74
SPG7-203ENST00000561702 KRTAP12-4P60329 112 aa4.19□□□□□ -1.74
SPG7-203ENST00000561702 KRTAP20-1Q3LI63 56 aa4.14□□□□□ -1.75
SPG7-203ENST00000561702 KRTAP5-4Q6L8H1 288 aa4.14□□□□□ -1.75
SPG7-203ENST00000561702 KRTAP4-11Q9BYQ6 195 aa4.13□□□□□ -1.75
SPG7-203ENST00000561702 KRTAP2-2Q9BYT5 123 aa4.12□□□□□ -1.75
SPG7-203ENST00000561702 SYNE1Q8NF91 8797 aaKnown RBP4.11□□□□□ -1.75
SPG7-203ENST00000561702 LCE3DQ9BYE3 92 aa4.02□□□□□ -1.77
SPG7-203ENST00000561702 KRTAP4-2Q9BYR5 136 aa4.01□□□□□ -1.77
SPG7-203ENST00000561702 MT4P47944 62 aa3.97□□□□□ -1.77
SPG7-203ENST00000561702 LCE3EQ5T5B0 92 aa3.97□□□□□ -1.77
SPG7-203ENST00000561702 KRTAP6-2Q3LI66 62 aa3.89□□□□□ -1.79
SPG7-203ENST00000561702 KRTAP20-2Q3LI61 65 aa3.87□□□□□ -1.79
SPG7-203ENST00000561702 MT3P25713 68 aa3.84□□□□□ -1.79
SPG7-203ENST00000561702 HMCN1Q96RW7 5635 aa3.79□□□□□ -1.8
SPG7-203ENST00000561702 KRTAP5-2Q701N4 177 aa3.76□□□□□ -1.81
SPG7-203ENST00000561702 KRTAP5-3Q6L8H2 238 aa3.73□□□□□ -1.81
SPG7-203ENST00000561702 PRM1P04553 51 aa3.66□□□□□ -1.82
SPG7-203ENST00000561702 OBSCNQ5VST9 7968 aa3.54□□□□□ -1.84
SPG7-203ENST00000561702 AHNAK2Q8IVF2 5795 aa3.4□□□□□ -1.87
SPG7-203ENST00000561702 LCE1FQ5T754 118 aa3.34□□□□□ -1.88
SPG7-203ENST00000561702 LCE1EQ5T753 118 aa3.32□□□□□ -1.88
SPG7-203ENST00000561702 KRTAP5-1Q6L8H4 278 aa3.26□□□□□ -1.89
SPG7-203ENST00000561702 KRTAP5-8O75690 187 aa3.23□□□□□ -1.89
SPG7-203ENST00000561702 KRTAP5-10Q6L8G5 202 aa3.22□□□□□ -1.89
SPG7-203ENST00000561702 LCE1BQ5T7P3 118 aa3.15□□□□□ -1.91
SPG7-203ENST00000561702 KRTAP5-7Q6L8G8 165 aa3.12□□□□□ -1.91
SPG7-203ENST00000561702 MUC5ACP98088 5654 aa3.11□□□□□ -1.91
SPG7-203ENST00000561702 LCE1CQ5T751 118 aa3.1□□□□□ -1.91
SPG7-203ENST00000561702 GPR98Q8WXG9 6306 aa3.09□□□□□ -1.92
SPG7-203ENST00000561702 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.91□□□□□ -1.94
SPG7-203ENST00000561702 KRTAP5-11Q6L8G4 156 aa2.8□□□□□ -1.96
SPG7-203ENST00000561702 KRTAP21-2Q3LI59 83 aa2.77□□□□□ -1.97
SPG7-203ENST00000561702 MUC5BQ9HC84 5762 aaPredicted RBP2.75□□□□□ -1.97
SPG7-203ENST00000561702 AHNAKQ09666 5890 aaKnown RBP2.53□□□□□ -2
SPG7-203ENST00000561702 KRTAP4-4Q9BYR3 166 aa2.49□□□□□ -2.01
SPG7-203ENST00000561702 PHGR1C9JFL3 82 aa2.36□□□□□ -2.03
SPG7-203ENST00000561702 KRTAP21-1Q3LI58 79 aa2.34□□□□□ -2.03
SPG7-203ENST00000561702 MUC19Q7Z5P9 8384 aa2.1□□□□□ -2.07
SPG7-203ENST00000561702 MUC16Q8WXI7 14507 aa1.55□□□□□ -2.16
Retrieved 78 of 20,778 RNA–protein pairs in 55.6 ms