RNA–Protein interactions for RNA: ENST00000561540.1

KCTD13-202, Transcript of potassium channel tetramerization domain containing 13, humanhuman

TSL 1 (best) BASIC

Gene KCTD13, Length 1,773 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCTD13-202ENST00000561540 KRTAP19-4Q3LI73 84 aa7.87□□□□□ -1.15
KCTD13-202ENST00000561540 SPRR5A0A1B0GTR4 108 aa7.84□□□□□ -1.15
KCTD13-202ENST00000561540 MUC12Q9UKN1 5478 aa7.84□□□□□ -1.15
KCTD13-202ENST00000561540 KRTAP9-7A8MTY7 169 aa7.82□□□□□ -1.16
KCTD13-202ENST00000561540 NDUFAF8A1L188 74 aa7.71□□□□□ -1.17
KCTD13-202ENST00000561540 KRTAP4-12Q9BQ66 201 aa7.7□□□□□ -1.18
KCTD13-202ENST00000561540 LUZP6Q538Z0 58 aa7.69□□□□□ -1.18
KCTD13-202ENST00000561540 MDN1Q9NU22 5596 aa7.68□□□□□ -1.18
KCTD13-202ENST00000561540 MT1LQ93083 61 aa7.67□□□□□ -1.18
KCTD13-202ENST00000561540 LCE1AQ5T7P2 110 aa7.61□□□□□ -1.19
KCTD13-202ENST00000561540 KRTAP19-3Q7Z4W3 81 aa7.61□□□□□ -1.19
KCTD13-202ENST00000561540 SPRR2EP22531 72 aa7.56□□□□□ -1.2
KCTD13-202ENST00000561540 SPRR2BP35325 72 aa7.56□□□□□ -1.2
KCTD13-202ENST00000561540 SPRR2AP35326 72 aa7.56□□□□□ -1.2
KCTD13-202ENST00000561540 LCE3CQ5T5A8 94 aa7.54□□□□□ -1.2
KCTD13-202ENST00000561540 LCE5AQ5TCM9 118 aa7.54□□□□□ -1.2
KCTD13-202ENST00000561540 MT1GP13640 62 aa7.52□□□□□ -1.21
KCTD13-202ENST00000561540 LCE4AQ5TA78 99 aa7.48□□□□□ -1.21
KCTD13-202ENST00000561540 MT1MQ8N339 61 aa7.43□□□□□ -1.22
KCTD13-202ENST00000561540 LCE3BQ5TA77 95 aa7.41□□□□□ -1.22
KCTD13-202ENST00000561540 NEBP20929 6669 aa7.4□□□□□ -1.23
KCTD13-202ENST00000561540 KRTAP4-7Q9BYR0 210 aa7.38□□□□□ -1.23
KCTD13-202ENST00000561540 SPRR2DP22532 72 aa7.29□□□□□ -1.24
KCTD13-202ENST00000561540 KRTAP4-3Q9BYR4 195 aa7.26□□□□□ -1.25
KCTD13-202ENST00000561540 KRTAP9-9Q9BYP9 154 aa7.23□□□□□ -1.25
KCTD13-202ENST00000561540 KRTAP9-4Q9BYQ2 154 aa7.23□□□□□ -1.25
KCTD13-202ENST00000561540 KRTAP9-6A8MVA2 160 aa7.15□□□□□ -1.27
KCTD13-202ENST00000561540 DSTQ03001 7570 aaKnown RBP7.14□□□□□ -1.27
KCTD13-202ENST00000561540 KRTAP2-3P0C7H8 128 aa6.95□□□□□ -1.3
KCTD13-202ENST00000561540 KRTAP2-4Q9BYR9 128 aa6.95□□□□□ -1.3
KCTD13-202ENST00000561540 LCE1DQ5T752 114 aa6.95□□□□□ -1.3
KCTD13-202ENST00000561540 A0A0A0MQY5 61 aa6.92□□□□□ -1.3
KCTD13-202ENST00000561540 KRTAP20-1Q3LI63 56 aa6.9□□□□□ -1.3
KCTD13-202ENST00000561540 KRTAP2-2Q9BYT5 123 aa6.8□□□□□ -1.32
KCTD13-202ENST00000561540 KRTAP2-1Q9BYU5 128 aa6.8□□□□□ -1.32
KCTD13-202ENST00000561540 KRTAP5-5Q701N2 237 aaPredicted RBP6.75□□□□□ -1.33
KCTD13-202ENST00000561540 KRTAP4-9Q9BYQ8 210 aa6.67□□□□□ -1.34
KCTD13-202ENST00000561540 KRTAP5-4Q6L8H1 288 aa6.58□□□□□ -1.36
KCTD13-202ENST00000561540 KRTAP4-11Q9BYQ6 195 aa6.54□□□□□ -1.36
KCTD13-202ENST00000561540 MT1AP04731 61 aa6.52□□□□□ -1.37
KCTD13-202ENST00000561540 KRTAP6-1Q3LI64 71 aa6.46□□□□□ -1.37
KCTD13-202ENST00000561540 KRTAP4-2Q9BYR5 136 aa6.39□□□□□ -1.39
KCTD13-202ENST00000561540 SYNE1Q8NF91 8797 aaKnown RBP6.39□□□□□ -1.39
KCTD13-202ENST00000561540 INE1O15225 51 aa6.36□□□□□ -1.39
KCTD13-202ENST00000561540 MT4P47944 62 aa6.33□□□□□ -1.4
KCTD13-202ENST00000561540 KRTAP12-4P60329 112 aa6.29□□□□□ -1.4
KCTD13-202ENST00000561540 HMCN1Q96RW7 5635 aa6.24□□□□□ -1.41
KCTD13-202ENST00000561540 KRTAP20-2Q3LI61 65 aa6.14□□□□□ -1.43
KCTD13-202ENST00000561540 KRTAP6-2Q3LI66 62 aa5.99□□□□□ -1.45
KCTD13-202ENST00000561540 KRTAP5-3Q6L8H2 238 aa5.95□□□□□ -1.46
KCTD13-202ENST00000561540 KRTAP5-2Q701N4 177 aa5.93□□□□□ -1.46
KCTD13-202ENST00000561540 MT3P25713 68 aa5.9□□□□□ -1.46
KCTD13-202ENST00000561540 LCE3DQ9BYE3 92 aa5.7□□□□□ -1.5
KCTD13-202ENST00000561540 AHNAK2Q8IVF2 5795 aa5.67□□□□□ -1.5
KCTD13-202ENST00000561540 LCE3EQ5T5B0 92 aa5.57□□□□□ -1.52
KCTD13-202ENST00000561540 OBSCNQ5VST9 7968 aa5.48□□□□□ -1.53
KCTD13-202ENST00000561540 KRTAP5-10Q6L8G5 202 aa5.4□□□□□ -1.54
KCTD13-202ENST00000561540 GPR98Q8WXG9 6306 aa5.27□□□□□ -1.57
KCTD13-202ENST00000561540 LCE1EQ5T753 118 aa5.22□□□□□ -1.57
KCTD13-202ENST00000561540 KRTAP5-8O75690 187 aa5.21□□□□□ -1.58
KCTD13-202ENST00000561540 KRTAP5-1Q6L8H4 278 aa5.16□□□□□ -1.58
KCTD13-202ENST00000561540 LCE1FQ5T754 118 aa5.06□□□□□ -1.6
KCTD13-202ENST00000561540 KRTAP5-7Q6L8G8 165 aa5.05□□□□□ -1.6
KCTD13-202ENST00000561540 MUC5ACP98088 5654 aa5□□□□□ -1.61
KCTD13-202ENST00000561540 PRM1P04553 51 aa4.99□□□□□ -1.61
KCTD13-202ENST00000561540 LCE1CQ5T751 118 aa4.86□□□□□ -1.63
KCTD13-202ENST00000561540 LCE1BQ5T7P3 118 aa4.86□□□□□ -1.63
KCTD13-202ENST00000561540 MUC5BQ9HC84 5762 aaPredicted RBP4.56□□□□□ -1.68
KCTD13-202ENST00000561540 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.54□□□□□ -1.68
KCTD13-202ENST00000561540 KRTAP5-11Q6L8G4 156 aa4.44□□□□□ -1.7
KCTD13-202ENST00000561540 AHNAKQ09666 5890 aaKnown RBP4.38□□□□□ -1.71
KCTD13-202ENST00000561540 KRTAP21-2Q3LI59 83 aa4.25□□□□□ -1.73
KCTD13-202ENST00000561540 KRTAP4-4Q9BYR3 166 aa3.77□□□□□ -1.81
KCTD13-202ENST00000561540 PHGR1C9JFL3 82 aa3.71□□□□□ -1.82
KCTD13-202ENST00000561540 MUC19Q7Z5P9 8384 aa3.32□□□□□ -1.88
KCTD13-202ENST00000561540 KRTAP21-1Q3LI58 79 aa3.1□□□□□ -1.91
KCTD13-202ENST00000561540 MUC16Q8WXI7 14507 aa2.39□□□□□ -2.03
Retrieved 77 of 20,778 RNA–protein pairs in 6.2 ms