RNA–Protein interactions for RNA: ENST00000561359.1

HERC1-213, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 3

Gene HERC1, Length 551 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-213ENST00000561359 KRTAP19-8Q3LI54 63 aa2.35□□□□□ -2.03
HERC1-213ENST00000561359 WFDC13Q8IUB5 93 aa2.33□□□□□ -2.04
HERC1-213ENST00000561359 TP53AIP1Q9HCN2 124 aa2.33□□□□□ -2.04
HERC1-213ENST00000561359 MIR22HGQ0VDD5 57 aa2.32□□□□□ -2.04
HERC1-213ENST00000561359 KRTAP25-1Q3LHN0 102 aa2.32□□□□□ -2.04
HERC1-213ENST00000561359 A0A087WSZ3 146 aa2.31□□□□□ -2.04
HERC1-213ENST00000561359 UQCR11O14957 56 aa2.31□□□□□ -2.04
HERC1-213ENST00000561359 SPRR2GQ9BYE4 73 aa2.31□□□□□ -2.04
HERC1-213ENST00000561359 H1FX-AS1Q4G0G2 97 aa2.3□□□□□ -2.04
HERC1-213ENST00000561359 LCE3AQ5TA76 89 aa2.3□□□□□ -2.04
HERC1-213ENST00000561359 AHNAK2Q8IVF2 5795 aa2.29□□□□□ -2.04
HERC1-213ENST00000561359 ACYP2P14621 99 aa2.29□□□□□ -2.04
HERC1-213ENST00000561359 HMCN1Q96RW7 5635 aa2.28□□□□□ -2.04
HERC1-213ENST00000561359 A0A1B0GU69 56 aa2.28□□□□□ -2.04
HERC1-213ENST00000561359 P0C880 135 aa2.28□□□□□ -2.04
HERC1-213ENST00000561359 DEFB116Q30KQ4 102 aa2.28□□□□□ -2.04
HERC1-213ENST00000561359 OBSCNQ5VST9 7968 aa2.27□□□□□ -2.05
HERC1-213ENST00000561359 MMP24-AS1A0A0U1RRL7 71 aa2.27□□□□□ -2.05
HERC1-213ENST00000561359 KRTAP5-10Q6L8G5 202 aa2.27□□□□□ -2.05
HERC1-213ENST00000561359 LINC00472Q9H8W2 130 aa2.27□□□□□ -2.05
HERC1-213ENST00000561359 SPRR5A0A1B0GTR4 108 aa2.26□□□□□ -2.05
HERC1-213ENST00000561359 DMAC1Q96GE9 116 aa2.26□□□□□ -2.05
HERC1-213ENST00000561359 KRTAP5-7Q6L8G8 165 aa2.24□□□□□ -2.05
HERC1-213ENST00000561359 PRO2289Q9P1D8 64 aa2.24□□□□□ -2.05
HERC1-213ENST00000561359 KRTAP4-3Q9BYR4 195 aa2.23□□□□□ -2.05
HERC1-213ENST00000561359 C8orf17Q9NRJ1 99 aa2.22□□□□□ -2.05
HERC1-213ENST00000561359 Q5W150 140 aa2.21□□□□□ -2.06
HERC1-213ENST00000561359 K7ERS5 55 aa2.2□□□□□ -2.06
HERC1-213ENST00000561359 MT4P47944 62 aa2.2□□□□□ -2.06
HERC1-213ENST00000561359 MRPL34Q9BQ48 92 aaKnown RBP2.2□□□□□ -2.06
HERC1-213ENST00000561359 A0A1B0GVX0 72 aa2.19□□□□□ -2.06
HERC1-213ENST00000561359 MT1XP80297 61 aa2.18□□□□□ -2.06
HERC1-213ENST00000561359 LUZP6Q538Z0 58 aa2.17□□□□□ -2.06
HERC1-213ENST00000561359 SPINT4Q6UDR6 99 aa2.15□□□□□ -2.07
HERC1-213ENST00000561359 H0YAA0 97 aa2.14□□□□□ -2.07
HERC1-213ENST00000561359 CRIPTQ9P021 101 aa2.13□□□□□ -2.07
HERC1-213ENST00000561359 S4R3F8 94 aa2.13□□□□□ -2.07
HERC1-213ENST00000561359 PLAC4Q8WY50 150 aa2.11□□□□□ -2.07
HERC1-213ENST00000561359 A0A1B0GU33 70 aa2.09□□□□□ -2.07
HERC1-213ENST00000561359 CAMK2N1Q7Z7J9 78 aa2.05□□□□□ -2.08
HERC1-213ENST00000561359 KRTAP5-5Q701N2 237 aaPredicted RBP2.04□□□□□ -2.08
HERC1-213ENST00000561359 KRTAP19-3Q7Z4W3 81 aa2.02□□□□□ -2.09
HERC1-213ENST00000561359 AHNAKQ09666 5890 aaKnown RBP2.01□□□□□ -2.09
HERC1-213ENST00000561359 KRTAP5-2Q701N4 177 aa1.99□□□□□ -2.09
HERC1-213ENST00000561359 LCE1CQ5T751 118 aa1.97□□□□□ -2.09
HERC1-213ENST00000561359 LCE1BQ5T7P3 118 aa1.97□□□□□ -2.09
HERC1-213ENST00000561359 C10orf95Q9H7T3 257 aa1.97□□□□□ -2.09
HERC1-213ENST00000561359 MT1EP04732 61 aa1.96□□□□□ -2.1
HERC1-213ENST00000561359 MUC5ACP98088 5654 aa1.96□□□□□ -2.1
HERC1-213ENST00000561359 MUC5BQ9HC84 5762 aaPredicted RBP1.96□□□□□ -2.1
HERC1-213ENST00000561359 KRTAP19-7Q3SYF9 63 aa1.95□□□□□ -2.1
HERC1-213ENST00000561359 KRTAP20-2Q3LI61 65 aa1.94□□□□□ -2.1
HERC1-213ENST00000561359 PP632Q6XCG6 107 aa1.94□□□□□ -2.1
HERC1-213ENST00000561359 R4GN34 69 aa1.94□□□□□ -2.1
HERC1-213ENST00000561359 MT1GP13640 62 aa1.93□□□□□ -2.1
HERC1-213ENST00000561359 M0QZ58 72 aa1.91□□□□□ -2.1
HERC1-213ENST00000561359 LCE3DQ9BYE3 92 aa1.91□□□□□ -2.1
HERC1-213ENST00000561359 KRTAP13-4Q3LI77 160 aa1.9□□□□□ -2.11
HERC1-213ENST00000561359 MT1MQ8N339 61 aa1.89□□□□□ -2.11
HERC1-213ENST00000561359 INE1O15225 51 aa1.87□□□□□ -2.11
HERC1-213ENST00000561359 KRTAP12-1P59990 96 aa1.87□□□□□ -2.11
HERC1-213ENST00000561359 A0A0D9SG42 100 aa1.86□□□□□ -2.11
HERC1-213ENST00000561359 KRTAP12-4P60329 112 aa1.85□□□□□ -2.11
HERC1-213ENST00000561359 KRTAP5-8O75690 187 aa1.84□□□□□ -2.11
HERC1-213ENST00000561359 KRTAP19-5Q3LI72 72 aa1.82□□□□□ -2.12
HERC1-213ENST00000561359 MT1LQ93083 61 aa1.81□□□□□ -2.12
HERC1-213ENST00000561359 SYNE1Q8NF91 8797 aaKnown RBP1.72□□□□□ -2.13
HERC1-213ENST00000561359 TNP1P09430 55 aa1.61□□□□□ -2.15
HERC1-213ENST00000561359 MUC19Q7Z5P9 8384 aa1.6□□□□□ -2.15
HERC1-213ENST00000561359 KRTAP6-2Q3LI66 62 aa1.57□□□□□ -2.16
HERC1-213ENST00000561359 KRTAP6-1Q3LI64 71 aa1.56□□□□□ -2.16
HERC1-213ENST00000561359 MT1AP04731 61 aa1.53□□□□□ -2.16
HERC1-213ENST00000561359 KRTAP12-3P60328 96 aa1.53□□□□□ -2.16
HERC1-213ENST00000561359 KRTAP21-2Q3LI59 83 aa1.4□□□□□ -2.19
HERC1-213ENST00000561359 PHGR1C9JFL3 82 aa1.36□□□□□ -2.19
HERC1-213ENST00000561359 PRM1P04553 51 aa1.13□□□□□ -2.23
HERC1-213ENST00000561359 KRTAP21-1Q3LI58 79 aa1.04□□□□□ -2.24
HERC1-213ENST00000561359 MUC16Q8WXI7 14507 aa0.78□□□□□ -2.28
Retrieved 78 of 20,778 RNA–protein pairs in 91 ms