RNA–Protein interactions for RNA: ENST00000560734.5

SHF-208, Transcript of Src homology 2 domain containing F, humanhuman

TSL 3 BASIC

Gene SHF, Length 1,731 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHF-208ENST00000560734 KMT2DO14686 5537 aa9.03□□□□□ -0.96
SHF-208ENST00000560734 LCE3CQ5T5A8 94 aa9.02□□□□□ -0.96
SHF-208ENST00000560734 MT1EP04732 61 aa9□□□□□ -0.97
SHF-208ENST00000560734 MT1LQ93083 61 aa8.88□□□□□ -0.99
SHF-208ENST00000560734 MUC12Q9UKN1 5478 aa8.74□□□□□ -1.01
SHF-208ENST00000560734 KRTAP5-9P26371 169 aa8.7□□□□□ -1.02
SHF-208ENST00000560734 NEBP20929 6669 aa8.65□□□□□ -1.02
SHF-208ENST00000560734 MT1GP13640 62 aa8.57□□□□□ -1.04
SHF-208ENST00000560734 KRTAP19-3Q7Z4W3 81 aa8.57□□□□□ -1.04
SHF-208ENST00000560734 KRTAP4-7Q9BYR0 210 aa8.54□□□□□ -1.04
SHF-208ENST00000560734 MDN1Q9NU22 5596 aa8.52□□□□□ -1.05
SHF-208ENST00000560734 KRTAP9-6A8MVA2 160 aa8.5□□□□□ -1.05
SHF-208ENST00000560734 SPRR2FQ96RM1 72 aa8.46□□□□□ -1.05
SHF-208ENST00000560734 MT1MQ8N339 61 aa8.43□□□□□ -1.06
SHF-208ENST00000560734 INE1O15225 51 aa8.42□□□□□ -1.06
SHF-208ENST00000560734 KRTAP20-1Q3LI63 56 aa8.38□□□□□ -1.07
SHF-208ENST00000560734 LCE5AQ5TCM9 118 aa8.38□□□□□ -1.07
SHF-208ENST00000560734 SPRR2EP22531 72 aa8.29□□□□□ -1.08
SHF-208ENST00000560734 SPRR2BP35325 72 aa8.29□□□□□ -1.08
SHF-208ENST00000560734 SPRR2AP35326 72 aa8.29□□□□□ -1.08
SHF-208ENST00000560734 LCE1AQ5T7P2 110 aa8.22□□□□□ -1.09
SHF-208ENST00000560734 KRTAP2-3P0C7H8 128 aa8.21□□□□□ -1.09
SHF-208ENST00000560734 KRTAP2-4Q9BYR9 128 aa8.21□□□□□ -1.09
SHF-208ENST00000560734 KRTAP2-1Q9BYU5 128 aa8.21□□□□□ -1.09
SHF-208ENST00000560734 KRTAP4-3Q9BYR4 195 aa8.2□□□□□ -1.1
SHF-208ENST00000560734 LOC100996750A0A140TA64 210 aa8.01□□□□□ -1.13
SHF-208ENST00000560734 SPRR2DP22532 72 aa8□□□□□ -1.13
SHF-208ENST00000560734 KRTAP2-2Q9BYT5 123 aa7.92□□□□□ -1.14
SHF-208ENST00000560734 LCE3BQ5TA77 95 aa7.8□□□□□ -1.16
SHF-208ENST00000560734 DSTQ03001 7570 aaKnown RBP7.63□□□□□ -1.19
SHF-208ENST00000560734 KRTAP5-5Q701N2 237 aaPredicted RBP7.6□□□□□ -1.19
SHF-208ENST00000560734 MT1AP04731 61 aa7.56□□□□□ -1.2
SHF-208ENST00000560734 KRTAP6-1Q3LI64 71 aa7.44□□□□□ -1.22
SHF-208ENST00000560734 KRTAP4-9Q9BYQ8 210 aa7.29□□□□□ -1.24
SHF-208ENST00000560734 KRTAP9-4Q9BYQ2 154 aa7.15□□□□□ -1.26
SHF-208ENST00000560734 LCE1DQ5T752 114 aa7.12□□□□□ -1.27
SHF-208ENST00000560734 KRTAP5-4Q6L8H1 288 aa7.08□□□□□ -1.28
SHF-208ENST00000560734 SYNE1Q8NF91 8797 aaKnown RBP7.07□□□□□ -1.28
SHF-208ENST00000560734 LCE4AQ5TA78 99 aa7.07□□□□□ -1.28
SHF-208ENST00000560734 KRTAP12-4P60329 112 aa7.06□□□□□ -1.28
SHF-208ENST00000560734 MT4P47944 62 aa7.02□□□□□ -1.29
SHF-208ENST00000560734 HMCN1Q96RW7 5635 aa6.98□□□□□ -1.29
SHF-208ENST00000560734 GPR98Q8WXG9 6306 aa6.93□□□□□ -1.3
SHF-208ENST00000560734 KRTAP4-6Q9BYQ5 205 aa6.87□□□□□ -1.31
SHF-208ENST00000560734 MT3P25713 68 aa6.84□□□□□ -1.31
SHF-208ENST00000560734 LCE3DQ9BYE3 92 aa6.84□□□□□ -1.31
SHF-208ENST00000560734 KRTAP6-2Q3LI66 62 aa6.78□□□□□ -1.32
SHF-208ENST00000560734 LCE3EQ5T5B0 92 aa6.73□□□□□ -1.33
SHF-208ENST00000560734 AHNAK2Q8IVF2 5795 aa6.67□□□□□ -1.34
SHF-208ENST00000560734 KRTAP5-10Q6L8G5 202 aa6.61□□□□□ -1.35
SHF-208ENST00000560734 KRTAP20-2Q3LI61 65 aa6.59□□□□□ -1.35
SHF-208ENST00000560734 KRTAP5-2Q701N4 177 aa6.5□□□□□ -1.37
SHF-208ENST00000560734 KRTAP5-3Q6L8H2 238 aa6.45□□□□□ -1.38
SHF-208ENST00000560734 KRTAP5-7Q6L8G8 165 aa6.32□□□□□ -1.4
SHF-208ENST00000560734 PRM1P04553 51 aa6.16□□□□□ -1.42
SHF-208ENST00000560734 OBSCNQ5VST9 7968 aa6.08□□□□□ -1.44
SHF-208ENST00000560734 KRTAP4-11Q9BYQ6 195 aa6.01□□□□□ -1.45
SHF-208ENST00000560734 LCE1EQ5T753 118 aa5.9□□□□□ -1.47
SHF-208ENST00000560734 KRTAP5-8O75690 187 aa5.83□□□□□ -1.48
SHF-208ENST00000560734 KRTAP5-1Q6L8H4 278 aa5.53□□□□□ -1.52
SHF-208ENST00000560734 MUC5BQ9HC84 5762 aaPredicted RBP5.5□□□□□ -1.53
SHF-208ENST00000560734 LCE1CQ5T751 118 aa5.48□□□□□ -1.53
SHF-208ENST00000560734 LCE1BQ5T7P3 118 aa5.48□□□□□ -1.53
SHF-208ENST00000560734 MUC5ACP98088 5654 aa5.47□□□□□ -1.53
SHF-208ENST00000560734 KRTAP9-9Q9BYP9 154 aa5.45□□□□□ -1.54
SHF-208ENST00000560734 KRTAP4-2Q9BYR5 136 aa5.41□□□□□ -1.54
SHF-208ENST00000560734 AHNAKQ09666 5890 aaKnown RBP5.4□□□□□ -1.54
SHF-208ENST00000560734 KRTAP5-6Q6L8G9 129 aaPredicted RBP5.2□□□□□ -1.58
SHF-208ENST00000560734 KRTAP21-2Q3LI59 83 aa4.9□□□□□ -1.62
SHF-208ENST00000560734 KRTAP5-11Q6L8G4 156 aa4.79□□□□□ -1.64
SHF-208ENST00000560734 KRTAP4-12Q9BQ66 201 aa4.52□□□□□ -1.69
SHF-208ENST00000560734 LCE1FQ5T754 118 aa4.26□□□□□ -1.73
SHF-208ENST00000560734 KRTAP4-4Q9BYR3 166 aa4.21□□□□□ -1.74
SHF-208ENST00000560734 PHGR1C9JFL3 82 aa4.09□□□□□ -1.75
SHF-208ENST00000560734 KRTAP21-1Q3LI58 79 aa3.96□□□□□ -1.78
SHF-208ENST00000560734 MUC19Q7Z5P9 8384 aa3.55□□□□□ -1.84
SHF-208ENST00000560734 MUC16Q8WXI7 14507 aa2.69□□□□□ -1.98
Retrieved 77 of 20,778 RNA–protein pairs in 12 ms