RNA–Protein interactions for RNA: ENST00000559974.5

RABGGTA-212, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 1,963 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-212ENST00000559974 LCE3CQ5T5A8 94 aa5.24□□□□□ -1.57
RABGGTA-212ENST00000559974 MUC12Q9UKN1 5478 aa5.17□□□□□ -1.58
RABGGTA-212ENST00000559974 KRTAP6-3Q3LI67 103 aa5.15□□□□□ -1.59
RABGGTA-212ENST00000559974 MT1EP04732 61 aa5.11□□□□□ -1.59
RABGGTA-212ENST00000559974 KRTAP5-9P26371 169 aa5.11□□□□□ -1.59
RABGGTA-212ENST00000559974 SPRR2FQ96RM1 72 aa5.11□□□□□ -1.59
RABGGTA-212ENST00000559974 KRTAP19-4Q3LI73 84 aa5.09□□□□□ -1.59
RABGGTA-212ENST00000559974 MDN1Q9NU22 5596 aa5.09□□□□□ -1.59
RABGGTA-212ENST00000559974 MT1LQ93083 61 aa5.07□□□□□ -1.6
RABGGTA-212ENST00000559974 KRTAP4-7Q9BYR0 210 aa5.02□□□□□ -1.61
RABGGTA-212ENST00000559974 KRTAP9-6A8MVA2 160 aa5□□□□□ -1.61
RABGGTA-212ENST00000559974 NEBP20929 6669 aa4.94□□□□□ -1.62
RABGGTA-212ENST00000559974 LCE1AQ5T7P2 110 aa4.93□□□□□ -1.62
RABGGTA-212ENST00000559974 SPRR2EP22531 72 aa4.92□□□□□ -1.62
RABGGTA-212ENST00000559974 SPRR2BP35325 72 aa4.92□□□□□ -1.62
RABGGTA-212ENST00000559974 SPRR2AP35326 72 aa4.92□□□□□ -1.62
RABGGTA-212ENST00000559974 KRTAP19-3Q7Z4W3 81 aa4.84□□□□□ -1.64
RABGGTA-212ENST00000559974 INE1O15225 51 aa4.82□□□□□ -1.64
RABGGTA-212ENST00000559974 MT1GP13640 62 aa4.81□□□□□ -1.64
RABGGTA-212ENST00000559974 MT1MQ8N339 61 aa4.8□□□□□ -1.64
RABGGTA-212ENST00000559974 LCE5AQ5TCM9 118 aa4.79□□□□□ -1.64
RABGGTA-212ENST00000559974 KRTAP2-3P0C7H8 128 aa4.77□□□□□ -1.65
RABGGTA-212ENST00000559974 KRTAP2-4Q9BYR9 128 aa4.77□□□□□ -1.65
RABGGTA-212ENST00000559974 KRTAP2-1Q9BYU5 128 aa4.77□□□□□ -1.65
RABGGTA-212ENST00000559974 KRTAP4-3Q9BYR4 195 aa4.76□□□□□ -1.65
RABGGTA-212ENST00000559974 SPRR2DP22532 72 aa4.74□□□□□ -1.65
RABGGTA-212ENST00000559974 DSTQ03001 7570 aaKnown RBP4.72□□□□□ -1.65
RABGGTA-212ENST00000559974 LOC100996750A0A140TA64 210 aa4.69□□□□□ -1.66
RABGGTA-212ENST00000559974 KRTAP20-1Q3LI63 56 aa4.6□□□□□ -1.67
RABGGTA-212ENST00000559974 LCE3BQ5TA77 95 aa4.57□□□□□ -1.68
RABGGTA-212ENST00000559974 KRTAP2-2Q9BYT5 123 aa4.42□□□□□ -1.7
RABGGTA-212ENST00000559974 MT1AP04731 61 aa4.29□□□□□ -1.72
RABGGTA-212ENST00000559974 KRTAP6-1Q3LI64 71 aa4.29□□□□□ -1.72
RABGGTA-212ENST00000559974 KRTAP5-5Q701N2 237 aaPredicted RBP4.29□□□□□ -1.72
RABGGTA-212ENST00000559974 KRTAP4-9Q9BYQ8 210 aa4.24□□□□□ -1.73
RABGGTA-212ENST00000559974 KRTAP5-4Q6L8H1 288 aa4.21□□□□□ -1.74
RABGGTA-212ENST00000559974 MT4P47944 62 aa4.18□□□□□ -1.74
RABGGTA-212ENST00000559974 SYNE1Q8NF91 8797 aaKnown RBP4.14□□□□□ -1.75
RABGGTA-212ENST00000559974 KRTAP12-4P60329 112 aa4.14□□□□□ -1.75
RABGGTA-212ENST00000559974 LCE1DQ5T752 114 aa4.14□□□□□ -1.75
RABGGTA-212ENST00000559974 HMCN1Q96RW7 5635 aa4.13□□□□□ -1.75
RABGGTA-212ENST00000559974 LCE4AQ5TA78 99 aa4.13□□□□□ -1.75
RABGGTA-212ENST00000559974 KRTAP4-6Q9BYQ5 205 aa4.13□□□□□ -1.75
RABGGTA-212ENST00000559974 KRTAP9-4Q9BYQ2 154 aa4.05□□□□□ -1.76
RABGGTA-212ENST00000559974 LCE3DQ9BYE3 92 aa4□□□□□ -1.77
RABGGTA-212ENST00000559974 KRTAP20-2Q3LI61 65 aa3.96□□□□□ -1.77
RABGGTA-212ENST00000559974 LCE3EQ5T5B0 92 aa3.93□□□□□ -1.78
RABGGTA-212ENST00000559974 KRTAP6-2Q3LI66 62 aa3.88□□□□□ -1.79
RABGGTA-212ENST00000559974 MT3P25713 68 aa3.86□□□□□ -1.79
RABGGTA-212ENST00000559974 KRTAP5-3Q6L8H2 238 aa3.84□□□□□ -1.79
RABGGTA-212ENST00000559974 AHNAK2Q8IVF2 5795 aa3.79□□□□□ -1.8
RABGGTA-212ENST00000559974 GPR98Q8WXG9 6306 aa3.78□□□□□ -1.8
RABGGTA-212ENST00000559974 KRTAP5-2Q701N4 177 aa3.77□□□□□ -1.81
RABGGTA-212ENST00000559974 OBSCNQ5VST9 7968 aa3.66□□□□□ -1.82
RABGGTA-212ENST00000559974 PRM1P04553 51 aa3.63□□□□□ -1.83
RABGGTA-212ENST00000559974 KRTAP5-10Q6L8G5 202 aa3.6□□□□□ -1.83
RABGGTA-212ENST00000559974 KRTAP4-11Q9BYQ6 195 aa3.5□□□□□ -1.85
RABGGTA-212ENST00000559974 KRTAP5-8O75690 187 aa3.4□□□□□ -1.86
RABGGTA-212ENST00000559974 KRTAP5-7Q6L8G8 165 aa3.4□□□□□ -1.87
RABGGTA-212ENST00000559974 KRTAP5-1Q6L8H4 278 aa3.33□□□□□ -1.88
RABGGTA-212ENST00000559974 LCE1EQ5T753 118 aa3.27□□□□□ -1.89
RABGGTA-212ENST00000559974 MUC5ACP98088 5654 aa3.25□□□□□ -1.89
RABGGTA-212ENST00000559974 LCE1FQ5T754 118 aa3.23□□□□□ -1.89
RABGGTA-212ENST00000559974 LCE1BQ5T7P3 118 aa3.14□□□□□ -1.91
RABGGTA-212ENST00000559974 KRTAP4-2Q9BYR5 136 aa3.13□□□□□ -1.91
RABGGTA-212ENST00000559974 MUC5BQ9HC84 5762 aaPredicted RBP3.1□□□□□ -1.91
RABGGTA-212ENST00000559974 KRTAP9-9Q9BYP9 154 aa3.07□□□□□ -1.92
RABGGTA-212ENST00000559974 LCE1CQ5T751 118 aa3.04□□□□□ -1.92
RABGGTA-212ENST00000559974 AHNAKQ09666 5890 aaKnown RBP3.02□□□□□ -1.93
RABGGTA-212ENST00000559974 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.88□□□□□ -1.95
RABGGTA-212ENST00000559974 KRTAP21-2Q3LI59 83 aa2.79□□□□□ -1.96
RABGGTA-212ENST00000559974 KRTAP4-12Q9BQ66 201 aa2.75□□□□□ -1.97
RABGGTA-212ENST00000559974 KRTAP5-11Q6L8G4 156 aa2.72□□□□□ -1.97
RABGGTA-212ENST00000559974 KRTAP4-4Q9BYR3 166 aa2.49□□□□□ -2.01
RABGGTA-212ENST00000559974 PHGR1C9JFL3 82 aa2.35□□□□□ -2.03
RABGGTA-212ENST00000559974 KRTAP21-1Q3LI58 79 aa2.27□□□□□ -2.05
RABGGTA-212ENST00000559974 MUC19Q7Z5P9 8384 aa2.22□□□□□ -2.05
RABGGTA-212ENST00000559974 MUC16Q8WXI7 14507 aa1.52□□□□□ -2.17
Retrieved 78 of 20,778 RNA–protein pairs in 94.7 ms