RNA–Protein interactions for RNA: ENST00000559276.5

USP3-212, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-212ENST00000559276 SPRR2EP22531 72 aa2.44□□□□□ -2.02
USP3-212ENST00000559276 SPRR2BP35325 72 aa2.44□□□□□ -2.02
USP3-212ENST00000559276 SPRR2AP35326 72 aa2.44□□□□□ -2.02
USP3-212ENST00000559276 LCE1AQ5T7P2 110 aa2.44□□□□□ -2.02
USP3-212ENST00000559276 LOC100996750A0A140TA64 210 aa2.43□□□□□ -2.02
USP3-212ENST00000559276 KRTAP4-6Q9BYQ5 205 aa2.43□□□□□ -2.02
USP3-212ENST00000559276 KRTAP2-2Q9BYT5 123 aa2.41□□□□□ -2.02
USP3-212ENST00000559276 KRTAP2-1Q9BYU5 128 aa2.41□□□□□ -2.02
USP3-212ENST00000559276 KRTAP4-8A0A0G2JLE6 195 aa2.4□□□□□ -2.03
USP3-212ENST00000559276 KRTAP4-8Q9BYQ9 185 aa2.4□□□□□ -2.03
USP3-212ENST00000559276 PRO2289Q9P1D8 64 aa2.4□□□□□ -2.03
USP3-212ENST00000559276 KRTAP8-1Q8IUC2 63 aa2.39□□□□□ -2.03
USP3-212ENST00000559276 SPRR2DP22532 72 aa2.36□□□□□ -2.03
USP3-212ENST00000559276 LCE5AQ5TCM9 118 aa2.36□□□□□ -2.03
USP3-212ENST00000559276 KRTAP10-7P60409 375 aaPredicted RBP2.34□□□□□ -2.03
USP3-212ENST00000559276 INE1O15225 51 aa2.32□□□□□ -2.04
USP3-212ENST00000559276 KRTAP10-12P60413 245 aa2.32□□□□□ -2.04
USP3-212ENST00000559276 LCE3BQ5TA77 95 aa2.32□□□□□ -2.04
USP3-212ENST00000559276 KRTAP9-4Q9BYQ2 154 aa2.32□□□□□ -2.04
USP3-212ENST00000559276 GPR98Q8WXG9 6306 aa2.29□□□□□ -2.04
USP3-212ENST00000559276 DSTQ03001 7570 aaKnown RBP2.27□□□□□ -2.05
USP3-212ENST00000559276 LCE3AQ5TA76 89 aa2.25□□□□□ -2.05
USP3-212ENST00000559276 KRTAP4-9Q9BYQ8 210 aa2.21□□□□□ -2.06
USP3-212ENST00000559276 MT3P25713 68 aa2.2□□□□□ -2.06
USP3-212ENST00000559276 KRTAP19-7Q3SYF9 63 aa2.2□□□□□ -2.06
USP3-212ENST00000559276 KRTAP9-9Q9BYP9 154 aa2.2□□□□□ -2.06
USP3-212ENST00000559276 KRTAP12-3P60328 96 aa2.19□□□□□ -2.06
USP3-212ENST00000559276 MT1EP04732 61 aa2.17□□□□□ -2.06
USP3-212ENST00000559276 KRTAP19-3Q7Z4W3 81 aa2.16□□□□□ -2.06
USP3-212ENST00000559276 LCE1DQ5T752 114 aa2.15□□□□□ -2.07
USP3-212ENST00000559276 LCE4AQ5TA78 99 aa2.15□□□□□ -2.07
USP3-212ENST00000559276 KRTAP4-12Q9BQ66 201 aa2.14□□□□□ -2.07
USP3-212ENST00000559276 HMCN1Q96RW7 5635 aa2.12□□□□□ -2.07
USP3-212ENST00000559276 AHNAK2Q8IVF2 5795 aa2.1□□□□□ -2.07
USP3-212ENST00000559276 MT1GP13640 62 aa2.09□□□□□ -2.07
USP3-212ENST00000559276 KRTAP19-5Q3LI72 72 aa2.09□□□□□ -2.07
USP3-212ENST00000559276 MT4P47944 62 aa2.08□□□□□ -2.08
USP3-212ENST00000559276 LCE3CQ5T5A8 94 aa2.07□□□□□ -2.08
USP3-212ENST00000559276 KRTAP5-10Q6L8G5 202 aa2.07□□□□□ -2.08
USP3-212ENST00000559276 KRTAP5-4Q6L8H1 288 aa2.07□□□□□ -2.08
USP3-212ENST00000559276 MT1MQ8N339 61 aa2.07□□□□□ -2.08
USP3-212ENST00000559276 MT1LQ93083 61 aa2.06□□□□□ -2.08
USP3-212ENST00000559276 KRTAP4-3Q9BYR4 195 aa2.06□□□□□ -2.08
USP3-212ENST00000559276 LCE1FQ5T754 118 aa2.03□□□□□ -2.08
USP3-212ENST00000559276 KRTAP5-7Q6L8G8 165 aa1.99□□□□□ -2.09
USP3-212ENST00000559276 KRTAP5-3Q6L8H2 238 aa1.98□□□□□ -2.09
USP3-212ENST00000559276 KRTAP4-7Q9BYR0 210 aa1.98□□□□□ -2.09
USP3-212ENST00000559276 KRTAP20-2Q3LI61 65 aa1.95□□□□□ -2.1
USP3-212ENST00000559276 KRTAP5-5Q701N2 237 aaPredicted RBP1.94□□□□□ -2.1
USP3-212ENST00000559276 SYNE1Q8NF91 8797 aaKnown RBP1.91□□□□□ -2.1
USP3-212ENST00000559276 KRTAP9-6A8MVA2 160 aa1.91□□□□□ -2.1
USP3-212ENST00000559276 KRTAP4-2Q9BYR5 136 aa1.9□□□□□ -2.11
USP3-212ENST00000559276 KRTAP4-11Q9BYQ6 195 aa1.86□□□□□ -2.11
USP3-212ENST00000559276 KRTAP12-4P60329 112 aa1.84□□□□□ -2.11
USP3-212ENST00000559276 KRTAP5-2Q701N4 177 aa1.8□□□□□ -2.12
USP3-212ENST00000559276 KRTAP5-8O75690 187 aa1.77□□□□□ -2.13
USP3-212ENST00000559276 AHNAKQ09666 5890 aaKnown RBP1.76□□□□□ -2.13
USP3-212ENST00000559276 MUC5ACP98088 5654 aa1.75□□□□□ -2.13
USP3-212ENST00000559276 KRTAP6-1Q3LI64 71 aa1.75□□□□□ -2.13
USP3-212ENST00000559276 MT1AP04731 61 aa1.74□□□□□ -2.13
USP3-212ENST00000559276 OBSCNQ5VST9 7968 aa1.73□□□□□ -2.13
USP3-212ENST00000559276 MUC5BQ9HC84 5762 aaPredicted RBP1.73□□□□□ -2.13
USP3-212ENST00000559276 LCE3EQ5T5B0 92 aa1.72□□□□□ -2.13
USP3-212ENST00000559276 LCE1EQ5T753 118 aa1.7□□□□□ -2.14
USP3-212ENST00000559276 KRTAP6-2Q3LI66 62 aa1.69□□□□□ -2.14
USP3-212ENST00000559276 KRTAP5-1Q6L8H4 278 aa1.64□□□□□ -2.15
USP3-212ENST00000559276 LCE3DQ9BYE3 92 aa1.61□□□□□ -2.15
USP3-212ENST00000559276 PRM1P04553 51 aa1.52□□□□□ -2.17
USP3-212ENST00000559276 LCE1BQ5T7P3 118 aa1.4□□□□□ -2.19
USP3-212ENST00000559276 LCE1CQ5T751 118 aa1.39□□□□□ -2.19
USP3-212ENST00000559276 KRTAP5-11Q6L8G4 156 aa1.29□□□□□ -2.2
USP3-212ENST00000559276 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.27□□□□□ -2.21
USP3-212ENST00000559276 PHGR1C9JFL3 82 aa1.18□□□□□ -2.22
USP3-212ENST00000559276 KRTAP21-2Q3LI59 83 aa1.17□□□□□ -2.22
USP3-212ENST00000559276 KRTAP4-4Q9BYR3 166 aa1.08□□□□□ -2.24
USP3-212ENST00000559276 MUC19Q7Z5P9 8384 aa1.07□□□□□ -2.24
USP3-212ENST00000559276 KRTAP21-1Q3LI58 79 aa1.03□□□□□ -2.24
USP3-212ENST00000559276 MUC16Q8WXI7 14507 aa0.77□□□□□ -2.29
Retrieved 78 of 20,778 RNA–protein pairs in 12.8 ms