RNA–Protein interactions for RNA: ENST00000559240.5

PBX1-215, Transcript of PBX homeobox 1, humanhuman

TSL 5 BASIC

Gene PBX1, Length 2,866 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX1-215ENST00000559240 KMT2DO14686 5537 aa5.95□□□□□ -1.46
PBX1-215ENST00000559240 MT1EP04732 61 aa5.92□□□□□ -1.46
PBX1-215ENST00000559240 KRTAP19-4Q3LI73 84 aa5.87□□□□□ -1.47
PBX1-215ENST00000559240 SPRR2FQ96RM1 72 aa5.85□□□□□ -1.47
PBX1-215ENST00000559240 MT1LQ93083 61 aa5.78□□□□□ -1.48
PBX1-215ENST00000559240 SYNE2Q8WXH0 6885 aaKnown RBP5.77□□□□□ -1.49
PBX1-215ENST00000559240 KRTAP19-3Q7Z4W3 81 aa5.73□□□□□ -1.49
PBX1-215ENST00000559240 MT1GP13640 62 aa5.69□□□□□ -1.5
PBX1-215ENST00000559240 LCE1AQ5T7P2 110 aa5.69□□□□□ -1.5
PBX1-215ENST00000559240 LCE5AQ5TCM9 118 aa5.68□□□□□ -1.5
PBX1-215ENST00000559240 SPRR2EP22531 72 aa5.61□□□□□ -1.51
PBX1-215ENST00000559240 SPRR2BP35325 72 aa5.61□□□□□ -1.51
PBX1-215ENST00000559240 SPRR2AP35326 72 aa5.61□□□□□ -1.51
PBX1-215ENST00000559240 LCE3CQ5T5A8 94 aa5.6□□□□□ -1.51
PBX1-215ENST00000559240 MUC12Q9UKN1 5478 aa5.59□□□□□ -1.51
PBX1-215ENST00000559240 MT1MQ8N339 61 aa5.58□□□□□ -1.52
PBX1-215ENST00000559240 KRTAP9-6A8MVA2 160 aa5.53□□□□□ -1.52
PBX1-215ENST00000559240 KRTAP2-3P0C7H8 128 aa5.51□□□□□ -1.53
PBX1-215ENST00000559240 KRTAP2-4Q9BYR9 128 aa5.51□□□□□ -1.53
PBX1-215ENST00000559240 KRTAP2-1Q9BYU5 128 aa5.51□□□□□ -1.53
PBX1-215ENST00000559240 NEBP20929 6669 aa5.5□□□□□ -1.53
PBX1-215ENST00000559240 MDN1Q9NU22 5596 aa5.48□□□□□ -1.53
PBX1-215ENST00000559240 SPRR2DP22532 72 aa5.43□□□□□ -1.54
PBX1-215ENST00000559240 KRTAP4-7Q9BYR0 210 aa5.43□□□□□ -1.54
PBX1-215ENST00000559240 KRTAP20-1Q3LI63 56 aa5.42□□□□□ -1.54
PBX1-215ENST00000559240 KRTAP4-3Q9BYR4 195 aa5.34□□□□□ -1.55
PBX1-215ENST00000559240 KRTAP12-4P60329 112 aa5.3□□□□□ -1.56
PBX1-215ENST00000559240 LCE3BQ5TA77 95 aa5.24□□□□□ -1.57
PBX1-215ENST00000559240 KRTAP2-2Q9BYT5 123 aa5.14□□□□□ -1.59
PBX1-215ENST00000559240 KRTAP5-5Q701N2 237 aaPredicted RBP5.12□□□□□ -1.59
PBX1-215ENST00000559240 LOC100996750A0A140TA64 210 aa5.11□□□□□ -1.59
PBX1-215ENST00000559240 DSTQ03001 7570 aaKnown RBP5.01□□□□□ -1.61
PBX1-215ENST00000559240 KRTAP5-4Q6L8H1 288 aa5□□□□□ -1.61
PBX1-215ENST00000559240 MT1AP04731 61 aa4.95□□□□□ -1.62
PBX1-215ENST00000559240 LCE4AQ5TA78 99 aa4.93□□□□□ -1.62
PBX1-215ENST00000559240 LCE1EQ5T753 118 aa4.93□□□□□ -1.62
PBX1-215ENST00000559240 PRM1P04553 51 aa4.85□□□□□ -1.63
PBX1-215ENST00000559240 KRTAP6-1Q3LI64 71 aa4.82□□□□□ -1.64
PBX1-215ENST00000559240 SYNE1Q8NF91 8797 aaKnown RBP4.82□□□□□ -1.64
PBX1-215ENST00000559240 KRTAP4-9Q9BYQ8 210 aa4.75□□□□□ -1.65
PBX1-215ENST00000559240 KRTAP9-4Q9BYQ2 154 aa4.71□□□□□ -1.66
PBX1-215ENST00000559240 LCE1DQ5T752 114 aa4.7□□□□□ -1.66
PBX1-215ENST00000559240 OBSCNQ5VST9 7968 aa4.67□□□□□ -1.66
PBX1-215ENST00000559240 MT4P47944 62 aa4.63□□□□□ -1.67
PBX1-215ENST00000559240 KRTAP4-6Q9BYQ5 205 aa4.63□□□□□ -1.67
PBX1-215ENST00000559240 KRTAP20-2Q3LI61 65 aa4.61□□□□□ -1.67
PBX1-215ENST00000559240 HMCN1Q96RW7 5635 aa4.52□□□□□ -1.69
PBX1-215ENST00000559240 KRTAP5-2Q701N4 177 aa4.51□□□□□ -1.69
PBX1-215ENST00000559240 KRTAP5-3Q6L8H2 238 aa4.49□□□□□ -1.69
PBX1-215ENST00000559240 MT3P25713 68 aa4.47□□□□□ -1.69
PBX1-215ENST00000559240 KRTAP6-2Q3LI66 62 aa4.46□□□□□ -1.7
PBX1-215ENST00000559240 LCE3EQ5T5B0 92 aa4.43□□□□□ -1.7
PBX1-215ENST00000559240 LCE3DQ9BYE3 92 aa4.43□□□□□ -1.7
PBX1-215ENST00000559240 GPR98Q8WXG9 6306 aa4.41□□□□□ -1.7
PBX1-215ENST00000559240 LCE1FQ5T754 118 aa4.34□□□□□ -1.72
PBX1-215ENST00000559240 AHNAK2Q8IVF2 5795 aa4.22□□□□□ -1.73
PBX1-215ENST00000559240 KRTAP5-10Q6L8G5 202 aa4.22□□□□□ -1.73
PBX1-215ENST00000559240 KRTAP5-7Q6L8G8 165 aa4.12□□□□□ -1.75
PBX1-215ENST00000559240 KRTAP4-11Q9BYQ6 195 aa4.02□□□□□ -1.77
PBX1-215ENST00000559240 KRTAP5-8O75690 187 aa3.9□□□□□ -1.78
PBX1-215ENST00000559240 MUC19Q7Z5P9 8384 aa3.9□□□□□ -1.78
PBX1-215ENST00000559240 KRTAP5-1Q6L8H4 278 aa3.88□□□□□ -1.79
PBX1-215ENST00000559240 LCE1CQ5T751 118 aa3.71□□□□□ -1.82
PBX1-215ENST00000559240 LCE1BQ5T7P3 118 aa3.71□□□□□ -1.82
PBX1-215ENST00000559240 KRTAP4-2Q9BYR5 136 aa3.68□□□□□ -1.82
PBX1-215ENST00000559240 MUC5ACP98088 5654 aa3.66□□□□□ -1.82
PBX1-215ENST00000559240 KRTAP9-9Q9BYP9 154 aa3.57□□□□□ -1.84
PBX1-215ENST00000559240 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.51□□□□□ -1.85
PBX1-215ENST00000559240 AHNAKQ09666 5890 aaKnown RBP3.5□□□□□ -1.85
PBX1-215ENST00000559240 MUC5BQ9HC84 5762 aaPredicted RBP3.41□□□□□ -1.86
PBX1-215ENST00000559240 KRTAP5-11Q6L8G4 156 aa3.3□□□□□ -1.88
PBX1-215ENST00000559240 KRTAP21-2Q3LI59 83 aa3.21□□□□□ -1.9
PBX1-215ENST00000559240 KRTAP21-1Q3LI58 79 aa3.01□□□□□ -1.93
PBX1-215ENST00000559240 KRTAP4-12Q9BQ66 201 aa2.95□□□□□ -1.94
PBX1-215ENST00000559240 PHGR1C9JFL3 82 aa2.82□□□□□ -1.96
PBX1-215ENST00000559240 KRTAP4-4Q9BYR3 166 aa2.7□□□□□ -1.98
PBX1-215ENST00000559240 MUC16Q8WXI7 14507 aa1.82□□□□□ -2.12
Retrieved 77 of 20,778 RNA–protein pairs in 115.3 ms