RNA–Protein interactions for RNA: ENST00000558924.1

SEC11A-206, Transcript of SEC11 homolog A, signal peptidase complex subunit, humanhuman

TSL 1 (best)

Gene SEC11A, Length 3,626 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC11A-206ENST00000558924 KRTAP9-2Q9BYQ4 174 aa4.21□□□□□ -1.74
SEC11A-206ENST00000558924 KRTAP19-7Q3SYF9 63 aa4.2□□□□□ -1.74
SEC11A-206ENST00000558924 KRTAP4-3Q9BYR4 195 aa4.18□□□□□ -1.74
SEC11A-206ENST00000558924 LOC100996750A0A140TA64 210 aa4.16□□□□□ -1.74
SEC11A-206ENST00000558924 MT1GP13640 62 aa4.11□□□□□ -1.75
SEC11A-206ENST00000558924 MT1LQ93083 61 aa4.11□□□□□ -1.75
SEC11A-206ENST00000558924 MT1EP04732 61 aa4.1□□□□□ -1.75
SEC11A-206ENST00000558924 KRTAP2-3P0C7H8 128 aa4.1□□□□□ -1.75
SEC11A-206ENST00000558924 KRTAP2-4Q9BYR9 128 aa4.1□□□□□ -1.75
SEC11A-206ENST00000558924 KRTAP2-1Q9BYU5 128 aa4.1□□□□□ -1.75
SEC11A-206ENST00000558924 SPRR2FQ96RM1 72 aa4.1□□□□□ -1.75
SEC11A-206ENST00000558924 SYNE2Q8WXH0 6885 aaKnown RBP4.1□□□□□ -1.75
SEC11A-206ENST00000558924 MACF1Q9UPN3 7388 aaKnown RBP4.05□□□□□ -1.76
SEC11A-206ENST00000558924 KRTAP19-6Q3LI70 58 aa3.98□□□□□ -1.77
SEC11A-206ENST00000558924 KRTAP12-4P60329 112 aa3.97□□□□□ -1.77
SEC11A-206ENST00000558924 LCE3BQ5TA77 95 aa3.95□□□□□ -1.78
SEC11A-206ENST00000558924 LCE2DQ5TA82 110 aaPredicted RBP3.93□□□□□ -1.78
SEC11A-206ENST00000558924 KRTAP4-9Q9BYQ8 210 aa3.91□□□□□ -1.78
SEC11A-206ENST00000558924 MDN1Q9NU22 5596 aa3.91□□□□□ -1.78
SEC11A-206ENST00000558924 KRTAP19-3Q7Z4W3 81 aa3.89□□□□□ -1.79
SEC11A-206ENST00000558924 MT1MQ8N339 61 aa3.88□□□□□ -1.79
SEC11A-206ENST00000558924 KRTAP9-7A8MTY7 169 aa3.85□□□□□ -1.79
SEC11A-206ENST00000558924 SPRR2EP22531 72 aa3.69□□□□□ -1.82
SEC11A-206ENST00000558924 SPRR2BP35325 72 aa3.69□□□□□ -1.82
SEC11A-206ENST00000558924 SPRR2AP35326 72 aa3.69□□□□□ -1.82
SEC11A-206ENST00000558924 KRTAP19-4Q3LI73 84 aa3.68□□□□□ -1.82
SEC11A-206ENST00000558924 LCE5AQ5TCM9 118 aa3.65□□□□□ -1.83
SEC11A-206ENST00000558924 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.59□□□□□ -1.83
SEC11A-206ENST00000558924 KRTAP6-1Q3LI64 71 aa3.58□□□□□ -1.84
SEC11A-206ENST00000558924 PRM1P04553 51 aa3.57□□□□□ -1.84
SEC11A-206ENST00000558924 LCE3DQ9BYE3 92 aa3.57□□□□□ -1.84
SEC11A-206ENST00000558924 LCE1AQ5T7P2 110 aa3.53□□□□□ -1.84
SEC11A-206ENST00000558924 SPRR2DP22532 72 aa3.5□□□□□ -1.85
SEC11A-206ENST00000558924 LCE3EQ5T5B0 92 aa3.49□□□□□ -1.85
SEC11A-206ENST00000558924 MUC19Q7Z5P9 8384 aa3.48□□□□□ -1.85
SEC11A-206ENST00000558924 KRTAP5-5Q701N2 237 aaPredicted RBP3.45□□□□□ -1.86
SEC11A-206ENST00000558924 GPR98Q8WXG9 6306 aa3.42□□□□□ -1.86
SEC11A-206ENST00000558924 KRTAP6-3Q3LI67 103 aa3.41□□□□□ -1.86
SEC11A-206ENST00000558924 MT1AP04731 61 aa3.4□□□□□ -1.87
SEC11A-206ENST00000558924 KRTAP5-9P26371 169 aa3.38□□□□□ -1.87
SEC11A-206ENST00000558924 KRTAP20-1Q3LI63 56 aa3.38□□□□□ -1.87
SEC11A-206ENST00000558924 NEBP20929 6669 aa3.36□□□□□ -1.87
SEC11A-206ENST00000558924 KRTAP6-2Q3LI66 62 aa3.29□□□□□ -1.88
SEC11A-206ENST00000558924 MT4P47944 62 aa3.29□□□□□ -1.88
SEC11A-206ENST00000558924 LCE1EQ5T753 118 aa3.24□□□□□ -1.89
SEC11A-206ENST00000558924 KRTAP9-4Q9BYQ2 154 aa3.2□□□□□ -1.9
SEC11A-206ENST00000558924 KRTAP2-2Q9BYT5 123 aa3.19□□□□□ -1.9
SEC11A-206ENST00000558924 MT3P25713 68 aa3.17□□□□□ -1.9
SEC11A-206ENST00000558924 KRTAP4-6Q9BYQ5 205 aa3.1□□□□□ -1.91
SEC11A-206ENST00000558924 LCE1DQ5T752 114 aa3.07□□□□□ -1.92
SEC11A-206ENST00000558924 HMCN1Q96RW7 5635 aa2.93□□□□□ -1.94
SEC11A-206ENST00000558924 LCE1BQ5T7P3 118 aa2.93□□□□□ -1.94
SEC11A-206ENST00000558924 KRTAP20-2Q3LI61 65 aa2.84□□□□□ -1.96
SEC11A-206ENST00000558924 KRTAP5-4Q6L8H1 288 aa2.83□□□□□ -1.96
SEC11A-206ENST00000558924 MUC5ACP98088 5654 aa2.8□□□□□ -1.96
SEC11A-206ENST00000558924 KRTAP4-11Q9BYQ6 195 aa2.76□□□□□ -1.97
SEC11A-206ENST00000558924 LCE1FQ5T754 118 aa2.75□□□□□ -1.97
SEC11A-206ENST00000558924 LCE4AQ5TA78 99 aa2.75□□□□□ -1.97
SEC11A-206ENST00000558924 AHNAK2Q8IVF2 5795 aa2.69□□□□□ -1.98
SEC11A-206ENST00000558924 MUC5BQ9HC84 5762 aaPredicted RBP2.67□□□□□ -1.98
SEC11A-206ENST00000558924 KRTAP5-3Q6L8H2 238 aa2.6□□□□□ -1.99
SEC11A-206ENST00000558924 KRTAP5-2Q701N4 177 aa2.58□□□□□ -2
SEC11A-206ENST00000558924 AHNAKQ09666 5890 aaKnown RBP2.56□□□□□ -2
SEC11A-206ENST00000558924 KRTAP5-7Q6L8G8 165 aa2.55□□□□□ -2
SEC11A-206ENST00000558924 KRTAP4-4Q9BYR3 166 aa2.49□□□□□ -2.01
SEC11A-206ENST00000558924 KRTAP5-10Q6L8G5 202 aa2.4□□□□□ -2.03
SEC11A-206ENST00000558924 KRTAP4-12Q9BQ66 201 aa2.35□□□□□ -2.03
SEC11A-206ENST00000558924 KRTAP4-2Q9BYR5 136 aa2.35□□□□□ -2.03
SEC11A-206ENST00000558924 KRTAP5-1Q6L8H4 278 aa2.31□□□□□ -2.04
SEC11A-206ENST00000558924 KRTAP9-9Q9BYP9 154 aa2.31□□□□□ -2.04
SEC11A-206ENST00000558924 KRTAP5-8O75690 187 aa2.26□□□□□ -2.05
SEC11A-206ENST00000558924 LCE1CQ5T751 118 aa2.24□□□□□ -2.05
SEC11A-206ENST00000558924 KRTAP21-2Q3LI59 83 aa2.16□□□□□ -2.06
SEC11A-206ENST00000558924 KRTAP21-1Q3LI58 79 aa2.11□□□□□ -2.07
SEC11A-206ENST00000558924 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.95□□□□□ -2.1
SEC11A-206ENST00000558924 KRTAP5-11Q6L8G4 156 aa1.91□□□□□ -2.1
SEC11A-206ENST00000558924 PHGR1C9JFL3 82 aa1.69□□□□□ -2.14
SEC11A-206ENST00000558924 MUC16Q8WXI7 14507 aa1.13□□□□□ -2.23
Retrieved 78 of 20,778 RNA–protein pairs in 10.9 ms