RNA–Protein interactions for RNA: ENST00000558602.5

IDH3A-208, Transcript of isocitrate dehydrogenase 3 (NAD(+)) alpha, humanhuman

TSL 2

Gene IDH3A, Length 2,217 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IDH3A-208ENST00000558602 A0A0D9SG42 100 aa2.26□□□□□ -2.05
IDH3A-208ENST00000558602 M0QZ58 72 aa2.26□□□□□ -2.05
IDH3A-208ENST00000558602 M0R2T5 61 aa2.26□□□□□ -2.05
IDH3A-208ENST00000558602 KRTAP6-3Q3LI67 103 aa2.25□□□□□ -2.05
IDH3A-208ENST00000558602 SYNE2Q8WXH0 6885 aaKnown RBP2.24□□□□□ -2.05
IDH3A-208ENST00000558602 USH2AO75445 5202 aa2.22□□□□□ -2.05
IDH3A-208ENST00000558602 KRTAP12-1P59990 96 aa2.22□□□□□ -2.05
IDH3A-208ENST00000558602 KRTAP12-2P59991 146 aa2.22□□□□□ -2.05
IDH3A-208ENST00000558602 R4GN34 69 aa2.22□□□□□ -2.05
IDH3A-208ENST00000558602 FCGBPQ9Y6R7 5405 aaPredicted RBP2.21□□□□□ -2.06
IDH3A-208ENST00000558602 MT2AP02795 61 aa2.19□□□□□ -2.06
IDH3A-208ENST00000558602 MT1FP04733 61 aa2.19□□□□□ -2.06
IDH3A-208ENST00000558602 KRTAP2-2Q9BYT5 123 aa2.18□□□□□ -2.06
IDH3A-208ENST00000558602 MACF1Q9UPN3 7388 aaKnown RBP2.17□□□□□ -2.06
IDH3A-208ENST00000558602 KRTAP10-10P60014 251 aa2.15□□□□□ -2.06
IDH3A-208ENST00000558602 LCE1AQ5T7P2 110 aa2.15□□□□□ -2.06
IDH3A-208ENST00000558602 SPRR2GQ9BYE4 73 aa2.15□□□□□ -2.07
IDH3A-208ENST00000558602 PLAC4Q8WY50 150 aa2.14□□□□□ -2.07
IDH3A-208ENST00000558602 KRTAP2-3P0C7H8 128 aa2.13□□□□□ -2.07
IDH3A-208ENST00000558602 KRTAP2-4Q9BYR9 128 aa2.13□□□□□ -2.07
IDH3A-208ENST00000558602 KRTAP9-6A8MVA2 160 aa2.12□□□□□ -2.07
IDH3A-208ENST00000558602 KRTAP19-8Q3LI54 63 aa2.09□□□□□ -2.07
IDH3A-208ENST00000558602 MT1BP07438 61 aa2.09□□□□□ -2.08
IDH3A-208ENST00000558602 PP632Q6XCG6 107 aa2.05□□□□□ -2.08
IDH3A-208ENST00000558602 LCE1FQ5T754 118 aa2.05□□□□□ -2.08
IDH3A-208ENST00000558602 MT1XP80297 61 aa2.02□□□□□ -2.09
IDH3A-208ENST00000558602 PRO2289Q9P1D8 64 aa2.02□□□□□ -2.09
IDH3A-208ENST00000558602 KRTAP10-5P60370 271 aa2.02□□□□□ -2.09
IDH3A-208ENST00000558602 KRTAP2-1Q9BYU5 128 aa2.02□□□□□ -2.09
IDH3A-208ENST00000558602 MUC12Q9UKN1 5478 aa2.01□□□□□ -2.09
IDH3A-208ENST00000558602 TNP1P09430 55 aa2□□□□□ -2.09
IDH3A-208ENST00000558602 KRTAP19-6Q3LI70 58 aa1.99□□□□□ -2.09
IDH3A-208ENST00000558602 KMT2DO14686 5537 aa1.98□□□□□ -2.09
IDH3A-208ENST00000558602 MDN1Q9NU22 5596 aa1.96□□□□□ -2.1
IDH3A-208ENST00000558602 SPRR5A0A1B0GTR4 108 aa1.95□□□□□ -2.1
IDH3A-208ENST00000558602 LCE3AQ5TA76 89 aa1.94□□□□□ -2.1
IDH3A-208ENST00000558602 INE1O15225 51 aa1.93□□□□□ -2.1
IDH3A-208ENST00000558602 KRTAP10-12P60413 245 aa1.9□□□□□ -2.1
IDH3A-208ENST00000558602 LCE3CQ5T5A8 94 aa1.9□□□□□ -2.1
IDH3A-208ENST00000558602 AHNAK2Q8IVF2 5795 aa1.89□□□□□ -2.11
IDH3A-208ENST00000558602 MT3P25713 68 aa1.89□□□□□ -2.11
IDH3A-208ENST00000558602 KRTAP8-1Q8IUC2 63 aa1.88□□□□□ -2.11
IDH3A-208ENST00000558602 KRTAP5-7Q6L8G8 165 aa1.85□□□□□ -2.11
IDH3A-208ENST00000558602 AHNAKQ09666 5890 aaKnown RBP1.84□□□□□ -2.11
IDH3A-208ENST00000558602 KRTAP12-3P60328 96 aa1.84□□□□□ -2.11
IDH3A-208ENST00000558602 KRTAP19-5Q3LI72 72 aa1.83□□□□□ -2.12
IDH3A-208ENST00000558602 KRTAP5-5Q701N2 237 aaPredicted RBP1.83□□□□□ -2.12
IDH3A-208ENST00000558602 KRTAP19-7Q3SYF9 63 aa1.81□□□□□ -2.12
IDH3A-208ENST00000558602 KRTAP5-10Q6L8G5 202 aa1.81□□□□□ -2.12
IDH3A-208ENST00000558602 SPRR2EP22531 72 aa1.79□□□□□ -2.12
IDH3A-208ENST00000558602 SPRR2BP35325 72 aa1.79□□□□□ -2.12
IDH3A-208ENST00000558602 SPRR2AP35326 72 aa1.79□□□□□ -2.12
IDH3A-208ENST00000558602 LCE3EQ5T5B0 92 aa1.76□□□□□ -2.13
IDH3A-208ENST00000558602 MT1EP04732 61 aa1.75□□□□□ -2.13
IDH3A-208ENST00000558602 SPRR2DP22532 72 aa1.75□□□□□ -2.13
IDH3A-208ENST00000558602 SPRR2FQ96RM1 72 aa1.74□□□□□ -2.13
IDH3A-208ENST00000558602 MT1LQ93083 61 aa1.73□□□□□ -2.13
IDH3A-208ENST00000558602 KRTAP19-3Q7Z4W3 81 aa1.67□□□□□ -2.14
IDH3A-208ENST00000558602 LCE1CQ5T751 118 aa1.66□□□□□ -2.14
IDH3A-208ENST00000558602 LCE1BQ5T7P3 118 aa1.66□□□□□ -2.14
IDH3A-208ENST00000558602 DSTQ03001 7570 aaKnown RBP1.66□□□□□ -2.14
IDH3A-208ENST00000558602 MT1MQ8N339 61 aa1.66□□□□□ -2.14
IDH3A-208ENST00000558602 MT1GP13640 62 aa1.65□□□□□ -2.15
IDH3A-208ENST00000558602 MUC5ACP98088 5654 aa1.62□□□□□ -2.15
IDH3A-208ENST00000558602 LCE3DQ9BYE3 92 aa1.59□□□□□ -2.15
IDH3A-208ENST00000558602 MT4P47944 62 aa1.52□□□□□ -2.17
IDH3A-208ENST00000558602 KRTAP6-1Q3LI64 71 aa1.48□□□□□ -2.17
IDH3A-208ENST00000558602 SYNE1Q8NF91 8797 aaKnown RBP1.47□□□□□ -2.17
IDH3A-208ENST00000558602 MT1AP04731 61 aa1.46□□□□□ -2.18
IDH3A-208ENST00000558602 MUC19Q7Z5P9 8384 aa1.45□□□□□ -2.18
IDH3A-208ENST00000558602 KRTAP12-4P60329 112 aa1.41□□□□□ -2.18
IDH3A-208ENST00000558602 KRTAP20-2Q3LI61 65 aa1.35□□□□□ -2.19
IDH3A-208ENST00000558602 KRTAP6-2Q3LI66 62 aa1.34□□□□□ -2.19
IDH3A-208ENST00000558602 PRM1P04553 51 aa1.29□□□□□ -2.2
IDH3A-208ENST00000558602 KRTAP21-2Q3LI59 83 aa1.24□□□□□ -2.21
IDH3A-208ENST00000558602 PHGR1C9JFL3 82 aa1.07□□□□□ -2.24
IDH3A-208ENST00000558602 KRTAP21-1Q3LI58 79 aa0.87□□□□□ -2.27
IDH3A-208ENST00000558602 MUC16Q8WXI7 14507 aa0.55□□□□□ -2.32
Retrieved 78 of 20,778 RNA–protein pairs in 112.1 ms