RNA–Protein interactions for RNA: ENST00000558544.5

TPM1-214, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 1,399 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-214ENST00000558544 KRTAP19-5Q3LI72 72 aa6.48□□□□□ -1.37
TPM1-214ENST00000558544 MT1EP04732 61 aa6.45□□□□□ -1.38
TPM1-214ENST00000558544 KRTAP20-1Q3LI63 56 aa6.41□□□□□ -1.38
TPM1-214ENST00000558544 SPRR2DP22532 72 aa6.35□□□□□ -1.39
TPM1-214ENST00000558544 KRTAP23-1A1A580 65 aa6.31□□□□□ -1.4
TPM1-214ENST00000558544 KRTAP19-3Q7Z4W3 81 aa6.31□□□□□ -1.4
TPM1-214ENST00000558544 KRTAP12-3P60328 96 aa6.27□□□□□ -1.41
TPM1-214ENST00000558544 LCE5AQ5TCM9 118 aa6.27□□□□□ -1.41
TPM1-214ENST00000558544 PP632Q6XCG6 107 aa6.27□□□□□ -1.41
TPM1-214ENST00000558544 KRTAP2-3P0C7H8 128 aa6.24□□□□□ -1.41
TPM1-214ENST00000558544 KRTAP2-4Q9BYR9 128 aa6.24□□□□□ -1.41
TPM1-214ENST00000558544 MT1LQ93083 61 aa6.23□□□□□ -1.41
TPM1-214ENST00000558544 MT1GP13640 62 aa6.19□□□□□ -1.42
TPM1-214ENST00000558544 LCE3BQ5TA77 95 aa6.15□□□□□ -1.43
TPM1-214ENST00000558544 MT1MQ8N339 61 aa6.13□□□□□ -1.43
TPM1-214ENST00000558544 KRTAP2-2Q9BYT5 123 aa6.06□□□□□ -1.44
TPM1-214ENST00000558544 KRTAP2-1Q9BYU5 128 aa6.06□□□□□ -1.44
TPM1-214ENST00000558544 DSTQ03001 7570 aaKnown RBP5.99□□□□□ -1.45
TPM1-214ENST00000558544 KRTAP15-1Q3LI76 137 aa5.98□□□□□ -1.45
TPM1-214ENST00000558544 KRTAP4-3Q9BYR4 195 aa5.98□□□□□ -1.45
TPM1-214ENST00000558544 KRTAP4-7Q9BYR0 210 aa5.97□□□□□ -1.45
TPM1-214ENST00000558544 KRTAP19-4Q3LI73 84 aa5.87□□□□□ -1.47
TPM1-214ENST00000558544 LCE3CQ5T5A8 94 aa5.8□□□□□ -1.48
TPM1-214ENST00000558544 LOC100996750A0A140TA64 210 aa5.64□□□□□ -1.51
TPM1-214ENST00000558544 KRTAP4-9Q9BYQ8 210 aa5.63□□□□□ -1.51
TPM1-214ENST00000558544 LCE4AQ5TA78 99 aa5.62□□□□□ -1.51
TPM1-214ENST00000558544 GPR98Q8WXG9 6306 aa5.62□□□□□ -1.51
TPM1-214ENST00000558544 SPRR5A0A1B0GTR4 108 aa5.59□□□□□ -1.51
TPM1-214ENST00000558544 KRTAP5-4Q6L8H1 288 aa5.58□□□□□ -1.52
TPM1-214ENST00000558544 KRTAP5-5Q701N2 237 aaPredicted RBP5.56□□□□□ -1.52
TPM1-214ENST00000558544 MT4P47944 62 aa5.54□□□□□ -1.52
TPM1-214ENST00000558544 LCE1DQ5T752 114 aa5.54□□□□□ -1.52
TPM1-214ENST00000558544 KRTAP9-6A8MVA2 160 aa5.49□□□□□ -1.53
TPM1-214ENST00000558544 HMCN1Q96RW7 5635 aa5.45□□□□□ -1.54
TPM1-214ENST00000558544 KRTAP4-6Q9BYQ5 205 aa5.42□□□□□ -1.54
TPM1-214ENST00000558544 SYNE1Q8NF91 8797 aaKnown RBP5.32□□□□□ -1.56
TPM1-214ENST00000558544 MT1AP04731 61 aa5.3□□□□□ -1.56
TPM1-214ENST00000558544 KRTAP12-4P60329 112 aa5.3□□□□□ -1.56
TPM1-214ENST00000558544 KRTAP20-2Q3LI61 65 aa5.27□□□□□ -1.57
TPM1-214ENST00000558544 KRTAP6-1Q3LI64 71 aa5.27□□□□□ -1.57
TPM1-214ENST00000558544 LUZP6Q538Z0 58 aa5.25□□□□□ -1.57
TPM1-214ENST00000558544 AHNAK2Q8IVF2 5795 aa5.24□□□□□ -1.57
TPM1-214ENST00000558544 NDUFAF8A1L188 74 aa5.14□□□□□ -1.59
TPM1-214ENST00000558544 KRTAP5-3Q6L8H2 238 aa5.08□□□□□ -1.6
TPM1-214ENST00000558544 KRTAP9-4Q9BYQ2 154 aa5.08□□□□□ -1.6
TPM1-214ENST00000558544 KRTAP5-10Q6L8G5 202 aa5.03□□□□□ -1.6
TPM1-214ENST00000558544 KRTAP5-2Q701N4 177 aa4.97□□□□□ -1.61
TPM1-214ENST00000558544 KRTAP6-2Q3LI66 62 aa4.95□□□□□ -1.62
TPM1-214ENST00000558544 H3BS24 57 aa4.88□□□□□ -1.63
TPM1-214ENST00000558544 A0A0A0MQY5 61 aa4.87□□□□□ -1.63
TPM1-214ENST00000558544 MT3P25713 68 aa4.82□□□□□ -1.64
TPM1-214ENST00000558544 KRTAP5-7Q6L8G8 165 aa4.81□□□□□ -1.64
TPM1-214ENST00000558544 KRTAP4-11Q9BYQ6 195 aa4.69□□□□□ -1.66
TPM1-214ENST00000558544 KRTAP5-8O75690 187 aa4.53□□□□□ -1.68
TPM1-214ENST00000558544 OBSCNQ5VST9 7968 aa4.53□□□□□ -1.68
TPM1-214ENST00000558544 KRTAP5-1Q6L8H4 278 aa4.38□□□□□ -1.71
TPM1-214ENST00000558544 KRTAP4-12Q9BQ66 201 aa4.35□□□□□ -1.71
TPM1-214ENST00000558544 AHNAKQ09666 5890 aaKnown RBP4.33□□□□□ -1.72
TPM1-214ENST00000558544 MUC5BQ9HC84 5762 aaPredicted RBP4.32□□□□□ -1.72
TPM1-214ENST00000558544 LCE1EQ5T753 118 aa4.31□□□□□ -1.72
TPM1-214ENST00000558544 MUC5ACP98088 5654 aa4.29□□□□□ -1.72
TPM1-214ENST00000558544 KRTAP9-9Q9BYP9 154 aa4.28□□□□□ -1.72
TPM1-214ENST00000558544 LCE3DQ9BYE3 92 aa4.27□□□□□ -1.73
TPM1-214ENST00000558544 INE1O15225 51 aa4.2□□□□□ -1.74
TPM1-214ENST00000558544 LCE3EQ5T5B0 92 aa4.08□□□□□ -1.76
TPM1-214ENST00000558544 LCE1BQ5T7P3 118 aa4.08□□□□□ -1.76
TPM1-214ENST00000558544 KRTAP4-2Q9BYR5 136 aa4.07□□□□□ -1.76
TPM1-214ENST00000558544 LCE1CQ5T751 118 aa4.02□□□□□ -1.77
TPM1-214ENST00000558544 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.7□□□□□ -1.82
TPM1-214ENST00000558544 KRTAP5-11Q6L8G4 156 aa3.62□□□□□ -1.83
TPM1-214ENST00000558544 PRM1P04553 51 aa3.54□□□□□ -1.84
TPM1-214ENST00000558544 KRTAP21-2Q3LI59 83 aa3.46□□□□□ -1.86
TPM1-214ENST00000558544 LCE1FQ5T754 118 aa3.39□□□□□ -1.87
TPM1-214ENST00000558544 KRTAP4-4Q9BYR3 166 aa3.13□□□□□ -1.91
TPM1-214ENST00000558544 PHGR1C9JFL3 82 aa3.1□□□□□ -1.91
TPM1-214ENST00000558544 MUC19Q7Z5P9 8384 aa2.78□□□□□ -1.96
TPM1-214ENST00000558544 KRTAP21-1Q3LI58 79 aa2.19□□□□□ -2.06
TPM1-214ENST00000558544 MUC16Q8WXI7 14507 aa2□□□□□ -2.09
Retrieved 78 of 20,778 RNA–protein pairs in 5.9 ms