RNA–Protein interactions for RNA: ENST00000558535.1

IDH3A-206, Transcript of isocitrate dehydrogenase 3 (NAD(+)) alpha, humanhuman

TSL 1 (best)

Gene IDH3A, Length 2,586 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IDH3A-206ENST00000558535 LCE4AQ5TA78 99 aa2.57□□□□□ -2
IDH3A-206ENST00000558535 KRTAP19-6Q3LI70 58 aa2.56□□□□□ -2
IDH3A-206ENST00000558535 SSPOA2VEC9 5147 aa2.56□□□□□ -2
IDH3A-206ENST00000558535 KRTAP5-9P26371 169 aa2.53□□□□□ -2.01
IDH3A-206ENST00000558535 FCGBPQ9Y6R7 5405 aaPredicted RBP2.51□□□□□ -2.01
IDH3A-206ENST00000558535 KRTAP10-12P60413 245 aa2.49□□□□□ -2.01
IDH3A-206ENST00000558535 KRTAP6-3Q3LI67 103 aa2.48□□□□□ -2.01
IDH3A-206ENST00000558535 KRTAP20-1Q3LI63 56 aa2.46□□□□□ -2.02
IDH3A-206ENST00000558535 KRTAP2-3P0C7H8 128 aa2.45□□□□□ -2.02
IDH3A-206ENST00000558535 LCE3AQ5TA76 89 aa2.45□□□□□ -2.02
IDH3A-206ENST00000558535 KRTAP2-4Q9BYR9 128 aa2.45□□□□□ -2.02
IDH3A-206ENST00000558535 KRTAP2-1Q9BYU5 128 aa2.45□□□□□ -2.02
IDH3A-206ENST00000558535 KRTAP2-2Q9BYT5 123 aa2.44□□□□□ -2.02
IDH3A-206ENST00000558535 SPRR2GQ9BYE4 73 aa2.44□□□□□ -2.02
IDH3A-206ENST00000558535 KRTAP19-8Q3LI54 63 aa2.43□□□□□ -2.02
IDH3A-206ENST00000558535 MACF1Q9UPN3 7388 aaKnown RBP2.41□□□□□ -2.02
IDH3A-206ENST00000558535 KRTAP12-3P60328 96 aa2.4□□□□□ -2.02
IDH3A-206ENST00000558535 KRTAP10-5P60370 271 aa2.4□□□□□ -2.03
IDH3A-206ENST00000558535 LCE1FQ5T754 118 aa2.4□□□□□ -2.03
IDH3A-206ENST00000558535 MT1BP07438 61 aa2.38□□□□□ -2.03
IDH3A-206ENST00000558535 SYNE2Q8WXH0 6885 aaKnown RBP2.36□□□□□ -2.03
IDH3A-206ENST00000558535 NEBP20929 6669 aa2.34□□□□□ -2.04
IDH3A-206ENST00000558535 LCE1AQ5T7P2 110 aa2.32□□□□□ -2.04
IDH3A-206ENST00000558535 LCE3CQ5T5A8 94 aa2.31□□□□□ -2.04
IDH3A-206ENST00000558535 KRTAP5-4Q6L8H1 288 aa2.28□□□□□ -2.04
IDH3A-206ENST00000558535 KRTAP10-7P60409 375 aaPredicted RBP2.25□□□□□ -2.05
IDH3A-206ENST00000558535 MT1XP80297 61 aa2.22□□□□□ -2.05
IDH3A-206ENST00000558535 MUC12Q9UKN1 5478 aa2.22□□□□□ -2.05
IDH3A-206ENST00000558535 KRTAP12-4P60329 112 aa2.22□□□□□ -2.05
IDH3A-206ENST00000558535 SPRR2FQ96RM1 72 aa2.2□□□□□ -2.06
IDH3A-206ENST00000558535 GPR98Q8WXG9 6306 aa2.2□□□□□ -2.06
IDH3A-206ENST00000558535 KMT2DO14686 5537 aa2.19□□□□□ -2.06
IDH3A-206ENST00000558535 SPRR2EP22531 72 aa2.19□□□□□ -2.06
IDH3A-206ENST00000558535 SPRR2BP35325 72 aa2.19□□□□□ -2.06
IDH3A-206ENST00000558535 SPRR2AP35326 72 aa2.19□□□□□ -2.06
IDH3A-206ENST00000558535 MDN1Q9NU22 5596 aa2.18□□□□□ -2.06
IDH3A-206ENST00000558535 MT3P25713 68 aa2.16□□□□□ -2.06
IDH3A-206ENST00000558535 KRTAP19-5Q3LI72 72 aa2.16□□□□□ -2.06
IDH3A-206ENST00000558535 SPRR2DP22532 72 aa2.13□□□□□ -2.07
IDH3A-206ENST00000558535 LCE3EQ5T5B0 92 aa2.09□□□□□ -2.07
IDH3A-206ENST00000558535 KRTAP9-6A8MVA2 160 aa2.08□□□□□ -2.08
IDH3A-206ENST00000558535 LCE1EQ5T753 118 aa2.06□□□□□ -2.08
IDH3A-206ENST00000558535 KRTAP4-4Q9BYR3 166 aa2.06□□□□□ -2.08
IDH3A-206ENST00000558535 KRTAP5-7Q6L8G8 165 aa2.05□□□□□ -2.08
IDH3A-206ENST00000558535 MT1AP04731 61 aa2.03□□□□□ -2.08
IDH3A-206ENST00000558535 KRTAP5-2Q701N4 177 aa2.03□□□□□ -2.08
IDH3A-206ENST00000558535 KRTAP5-1Q6L8H4 278 aa2.03□□□□□ -2.09
IDH3A-206ENST00000558535 KRTAP19-3Q7Z4W3 81 aa2□□□□□ -2.09
IDH3A-206ENST00000558535 MT1EP04732 61 aa2□□□□□ -2.09
IDH3A-206ENST00000558535 KRTAP19-7Q3SYF9 63 aa1.99□□□□□ -2.09
IDH3A-206ENST00000558535 MUC5BQ9HC84 5762 aaPredicted RBP1.97□□□□□ -2.09
IDH3A-206ENST00000558535 KRTAP5-8O75690 187 aa1.97□□□□□ -2.09
IDH3A-206ENST00000558535 MT1GP13640 62 aa1.97□□□□□ -2.09
IDH3A-206ENST00000558535 KRTAP5-10Q6L8G5 202 aa1.97□□□□□ -2.09
IDH3A-206ENST00000558535 PRM1P04553 51 aa1.96□□□□□ -2.1
IDH3A-206ENST00000558535 KRTAP5-11Q6L8G4 156 aa1.95□□□□□ -2.1
IDH3A-206ENST00000558535 MT1LQ93083 61 aa1.95□□□□□ -2.1
IDH3A-206ENST00000558535 LCE3DQ9BYE3 92 aa1.91□□□□□ -2.1
IDH3A-206ENST00000558535 AHNAKQ09666 5890 aaKnown RBP1.89□□□□□ -2.11
IDH3A-206ENST00000558535 MT1MQ8N339 61 aa1.89□□□□□ -2.11
IDH3A-206ENST00000558535 KRTAP5-5Q701N2 237 aaPredicted RBP1.87□□□□□ -2.11
IDH3A-206ENST00000558535 AHNAK2Q8IVF2 5795 aa1.86□□□□□ -2.11
IDH3A-206ENST00000558535 MT4P47944 62 aa1.81□□□□□ -2.12
IDH3A-206ENST00000558535 DSTQ03001 7570 aaKnown RBP1.81□□□□□ -2.12
IDH3A-206ENST00000558535 KRTAP4-3Q9BYR4 195 aa1.8□□□□□ -2.12
IDH3A-206ENST00000558535 KRTAP20-2Q3LI61 65 aa1.74□□□□□ -2.13
IDH3A-206ENST00000558535 KRTAP6-2Q3LI66 62 aa1.73□□□□□ -2.13
IDH3A-206ENST00000558535 SYNE1Q8NF91 8797 aaKnown RBP1.66□□□□□ -2.14
IDH3A-206ENST00000558535 MUC5ACP98088 5654 aa1.62□□□□□ -2.15
IDH3A-206ENST00000558535 KRTAP6-1Q3LI64 71 aa1.61□□□□□ -2.15
IDH3A-206ENST00000558535 MUC19Q7Z5P9 8384 aa1.61□□□□□ -2.15
IDH3A-206ENST00000558535 OBSCNQ5VST9 7968 aa1.53□□□□□ -2.16
IDH3A-206ENST00000558535 KRTAP21-1Q3LI58 79 aa1.42□□□□□ -2.18
IDH3A-206ENST00000558535 LCE1CQ5T751 118 aa1.34□□□□□ -2.2
IDH3A-206ENST00000558535 LCE1BQ5T7P3 118 aa1.34□□□□□ -2.2
IDH3A-206ENST00000558535 PHGR1C9JFL3 82 aa1.09□□□□□ -2.23
IDH3A-206ENST00000558535 KRTAP21-2Q3LI59 83 aa1.05□□□□□ -2.24
IDH3A-206ENST00000558535 MUC16Q8WXI7 14507 aa0.67□□□□□ -2.3
Retrieved 78 of 20,778 RNA–protein pairs in 194.2 ms