RNA–Protein interactions for RNA: ENST00000557510.5

NPC2-209, Transcript of NPC intracellular cholesterol transporter 2, humanhuman

TSL 1 (best) BASIC

Gene NPC2, Length 1,029 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC2-209ENST00000557510 KRTAP10-5P60370 271 aa4.02□□□□□ -1.77
NPC2-209ENST00000557510 KRTAP12-2P59991 146 aa4.01□□□□□ -1.77
NPC2-209ENST00000557510 KRTAP5-9P26371 169 aa3.98□□□□□ -1.77
NPC2-209ENST00000557510 KRTAP20-1Q3LI63 56 aa3.98□□□□□ -1.77
NPC2-209ENST00000557510 KMT2DO14686 5537 aa3.98□□□□□ -1.77
NPC2-209ENST00000557510 C10orf95Q9H7T3 257 aa3.94□□□□□ -1.78
NPC2-209ENST00000557510 LCE1FQ5T754 118 aa3.93□□□□□ -1.78
NPC2-209ENST00000557510 R4GN34 69 aa3.93□□□□□ -1.78
NPC2-209ENST00000557510 MDN1Q9NU22 5596 aa3.92□□□□□ -1.78
NPC2-209ENST00000557510 PP632Q6XCG6 107 aa3.89□□□□□ -1.79
NPC2-209ENST00000557510 KRTAP2-3P0C7H8 128 aa3.83□□□□□ -1.8
NPC2-209ENST00000557510 SPRR2FQ96RM1 72 aa3.83□□□□□ -1.8
NPC2-209ENST00000557510 KRTAP2-4Q9BYR9 128 aa3.83□□□□□ -1.8
NPC2-209ENST00000557510 MT1XP80297 61 aa3.82□□□□□ -1.8
NPC2-209ENST00000557510 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.81□□□□□ -1.8
NPC2-209ENST00000557510 SPRR2EP22531 72 aa3.8□□□□□ -1.8
NPC2-209ENST00000557510 SPRR2BP35325 72 aa3.8□□□□□ -1.8
NPC2-209ENST00000557510 SPRR2AP35326 72 aa3.8□□□□□ -1.8
NPC2-209ENST00000557510 PLAC4Q8WY50 150 aa3.8□□□□□ -1.8
NPC2-209ENST00000557510 CAMK2N1Q7Z7J9 78 aa3.76□□□□□ -1.81
NPC2-209ENST00000557510 LUZP6Q538Z0 58 aa3.75□□□□□ -1.81
NPC2-209ENST00000557510 KRTAP8-1Q8IUC2 63 aa3.75□□□□□ -1.81
NPC2-209ENST00000557510 KRTAP10-12P60413 245 aa3.74□□□□□ -1.81
NPC2-209ENST00000557510 PRO2289Q9P1D8 64 aa3.73□□□□□ -1.81
NPC2-209ENST00000557510 KRTAP2-1Q9BYU5 128 aa3.69□□□□□ -1.82
NPC2-209ENST00000557510 TNP1P09430 55 aa3.68□□□□□ -1.82
NPC2-209ENST00000557510 SPRR2DP22532 72 aa3.67□□□□□ -1.82
NPC2-209ENST00000557510 KRTAP10-7P60409 375 aaPredicted RBP3.65□□□□□ -1.83
NPC2-209ENST00000557510 LCE3CQ5T5A8 94 aa3.65□□□□□ -1.83
NPC2-209ENST00000557510 LCE1EQ5T753 118 aa3.55□□□□□ -1.84
NPC2-209ENST00000557510 SPRR5A0A1B0GTR4 108 aa3.53□□□□□ -1.84
NPC2-209ENST00000557510 KRTAP5-11Q6L8G4 156 aa3.52□□□□□ -1.85
NPC2-209ENST00000557510 GPR98Q8WXG9 6306 aa3.45□□□□□ -1.86
NPC2-209ENST00000557510 DSTQ03001 7570 aaKnown RBP3.44□□□□□ -1.86
NPC2-209ENST00000557510 KRTAP19-7Q3SYF9 63 aa3.42□□□□□ -1.86
NPC2-209ENST00000557510 MT1EP04732 61 aa3.38□□□□□ -1.87
NPC2-209ENST00000557510 KRTAP19-3Q7Z4W3 81 aa3.37□□□□□ -1.87
NPC2-209ENST00000557510 INE1O15225 51 aa3.33□□□□□ -1.88
NPC2-209ENST00000557510 LCE3EQ5T5B0 92 aa3.33□□□□□ -1.88
NPC2-209ENST00000557510 LCE3AQ5TA76 89 aa3.33□□□□□ -1.88
NPC2-209ENST00000557510 KRTAP9-6A8MVA2 160 aa3.29□□□□□ -1.88
NPC2-209ENST00000557510 KRTAP19-5Q3LI72 72 aa3.28□□□□□ -1.88
NPC2-209ENST00000557510 KRTAP5-1Q6L8H4 278 aa3.26□□□□□ -1.89
NPC2-209ENST00000557510 MT1GP13640 62 aa3.25□□□□□ -1.89
NPC2-209ENST00000557510 MT4P47944 62 aa3.25□□□□□ -1.89
NPC2-209ENST00000557510 HMCN1Q96RW7 5635 aa3.25□□□□□ -1.89
NPC2-209ENST00000557510 MT1MQ8N339 61 aa3.24□□□□□ -1.89
NPC2-209ENST00000557510 KRTAP12-3P60328 96 aa3.23□□□□□ -1.89
NPC2-209ENST00000557510 KRTAP5-4Q6L8H1 288 aa3.21□□□□□ -1.9
NPC2-209ENST00000557510 MT1LQ93083 61 aa3.21□□□□□ -1.9
NPC2-209ENST00000557510 KRTAP4-3Q9BYR4 195 aa3.21□□□□□ -1.9
NPC2-209ENST00000557510 AHNAK2Q8IVF2 5795 aa3.2□□□□□ -1.9
NPC2-209ENST00000557510 KRTAP4-4Q9BYR3 166 aa3.19□□□□□ -1.9
NPC2-209ENST00000557510 KRTAP5-10Q6L8G5 202 aa3.14□□□□□ -1.91
NPC2-209ENST00000557510 KRTAP5-7Q6L8G8 165 aa3.02□□□□□ -1.93
NPC2-209ENST00000557510 KRTAP20-2Q3LI61 65 aa3□□□□□ -1.93
NPC2-209ENST00000557510 KRTAP5-5Q701N2 237 aaPredicted RBP2.98□□□□□ -1.93
NPC2-209ENST00000557510 SYNE1Q8NF91 8797 aaKnown RBP2.95□□□□□ -1.94
NPC2-209ENST00000557510 OBSCNQ5VST9 7968 aa2.93□□□□□ -1.94
NPC2-209ENST00000557510 KRTAP12-4P60329 112 aa2.88□□□□□ -1.95
NPC2-209ENST00000557510 KRTAP5-2Q701N4 177 aa2.81□□□□□ -1.96
NPC2-209ENST00000557510 LCE3DQ9BYE3 92 aa2.81□□□□□ -1.96
NPC2-209ENST00000557510 KRTAP6-1Q3LI64 71 aa2.74□□□□□ -1.97
NPC2-209ENST00000557510 MT1AP04731 61 aa2.71□□□□□ -1.98
NPC2-209ENST00000557510 KRTAP5-8O75690 187 aa2.7□□□□□ -1.98
NPC2-209ENST00000557510 AHNAKQ09666 5890 aaKnown RBP2.66□□□□□ -1.98
NPC2-209ENST00000557510 MUC5BQ9HC84 5762 aaPredicted RBP2.64□□□□□ -1.99
NPC2-209ENST00000557510 MUC5ACP98088 5654 aa2.64□□□□□ -1.99
NPC2-209ENST00000557510 KRTAP6-2Q3LI66 62 aa2.64□□□□□ -1.99
NPC2-209ENST00000557510 LCE1CQ5T751 118 aa2.38□□□□□ -2.03
NPC2-209ENST00000557510 LCE1BQ5T7P3 118 aa2.38□□□□□ -2.03
NPC2-209ENST00000557510 PRM1P04553 51 aa2.23□□□□□ -2.05
NPC2-209ENST00000557510 MUC19Q7Z5P9 8384 aa1.97□□□□□ -2.09
NPC2-209ENST00000557510 PHGR1C9JFL3 82 aa1.83□□□□□ -2.12
NPC2-209ENST00000557510 KRTAP21-2Q3LI59 83 aa1.81□□□□□ -2.12
NPC2-209ENST00000557510 KRTAP21-1Q3LI58 79 aa1.46□□□□□ -2.18
NPC2-209ENST00000557510 MUC16Q8WXI7 14507 aa1.16□□□□□ -2.22
Retrieved 77 of 20,778 RNA–protein pairs in 229.5 ms