RNA–Protein interactions for RNA: ENST00000557380.5

NEMF-215, Transcript of nuclear export mediator factor, humanhuman

TSL 1 (best)

Gene NEMF, Length 1,742 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEMF-215ENST00000557380 LCE1EQ5T753 118 aa3.61□□□□□ -1.83
NEMF-215ENST00000557380 TNP1P09430 55 aa3.61□□□□□ -1.83
NEMF-215ENST00000557380 MT1BP07438 61 aa3.59□□□□□ -1.83
NEMF-215ENST00000557380 KRTAP10-5P60370 271 aa3.51□□□□□ -1.85
NEMF-215ENST00000557380 MT1XP80297 61 aa3.51□□□□□ -1.85
NEMF-215ENST00000557380 FSIP2Q5CZC0 6907 aa3.49□□□□□ -1.85
NEMF-215ENST00000557380 CRCT1Q9UGL9 99 aa3.48□□□□□ -1.85
NEMF-215ENST00000557380 PRO2289Q9P1D8 64 aa3.47□□□□□ -1.85
NEMF-215ENST00000557380 A0A0A0MQY5 61 aa3.41□□□□□ -1.86
NEMF-215ENST00000557380 LCE3AQ5TA76 89 aa3.41□□□□□ -1.86
NEMF-215ENST00000557380 USH2AO75445 5202 aa3.4□□□□□ -1.87
NEMF-215ENST00000557380 KRTAP8-1Q8IUC2 63 aa3.39□□□□□ -1.87
NEMF-215ENST00000557380 KRTAP10-12P60413 245 aa3.38□□□□□ -1.87
NEMF-215ENST00000557380 SPRR5A0A1B0GTR4 108 aa3.28□□□□□ -1.88
NEMF-215ENST00000557380 KRTAP12-3P60328 96 aa3.28□□□□□ -1.88
NEMF-215ENST00000557380 SSPOA2VEC9 5147 aa3.27□□□□□ -1.89
NEMF-215ENST00000557380 KRTAP19-6Q3LI70 58 aa3.26□□□□□ -1.89
NEMF-215ENST00000557380 NDUFAF8A1L188 74 aa3.24□□□□□ -1.89
NEMF-215ENST00000557380 LCE1FQ5T754 118 aa3.22□□□□□ -1.89
NEMF-215ENST00000557380 LUZP6Q538Z0 58 aa3.21□□□□□ -1.9
NEMF-215ENST00000557380 OBSCNQ5VST9 7968 aa3.2□□□□□ -1.9
NEMF-215ENST00000557380 KRTAP19-5Q3LI72 72 aa3.19□□□□□ -1.9
NEMF-215ENST00000557380 KRTAP5-2Q701N4 177 aa3.19□□□□□ -1.9
NEMF-215ENST00000557380 KRTAP9-6A8MVA2 160 aa3.18□□□□□ -1.9
NEMF-215ENST00000557380 KMT2DO14686 5537 aa3.16□□□□□ -1.9
NEMF-215ENST00000557380 KRTAP19-7Q3SYF9 63 aa3.14□□□□□ -1.91
NEMF-215ENST00000557380 KRTAP4-3Q9BYR4 195 aa3.1□□□□□ -1.91
NEMF-215ENST00000557380 FCGBPQ9Y6R7 5405 aaPredicted RBP3.08□□□□□ -1.92
NEMF-215ENST00000557380 LCE3CQ5T5A8 94 aa3.08□□□□□ -1.92
NEMF-215ENST00000557380 MT1EP04732 61 aa3.07□□□□□ -1.92
NEMF-215ENST00000557380 SYNE2Q8WXH0 6885 aaKnown RBP3.05□□□□□ -1.92
NEMF-215ENST00000557380 MT1LQ93083 61 aa3.03□□□□□ -1.92
NEMF-215ENST00000557380 NEBP20929 6669 aa2.98□□□□□ -1.93
NEMF-215ENST00000557380 MACF1Q9UPN3 7388 aaKnown RBP2.95□□□□□ -1.94
NEMF-215ENST00000557380 KRTAP20-1Q3LI63 56 aa2.95□□□□□ -1.94
NEMF-215ENST00000557380 KRTAP19-3Q7Z4W3 81 aa2.93□□□□□ -1.94
NEMF-215ENST00000557380 MT1GP13640 62 aa2.92□□□□□ -1.94
NEMF-215ENST00000557380 MUC12Q9UKN1 5478 aa2.89□□□□□ -1.95
NEMF-215ENST00000557380 MT1MQ8N339 61 aa2.88□□□□□ -1.95
NEMF-215ENST00000557380 SPRR2FQ96RM1 72 aa2.87□□□□□ -1.95
NEMF-215ENST00000557380 GPR98Q8WXG9 6306 aa2.87□□□□□ -1.95
NEMF-215ENST00000557380 KRTAP6-3Q3LI67 103 aa2.83□□□□□ -1.96
NEMF-215ENST00000557380 HMCN1Q96RW7 5635 aa2.82□□□□□ -1.96
NEMF-215ENST00000557380 LCE3EQ5T5B0 92 aa2.79□□□□□ -1.96
NEMF-215ENST00000557380 KRTAP2-3P0C7H8 128 aa2.79□□□□□ -1.96
NEMF-215ENST00000557380 KRTAP2-4Q9BYR9 128 aa2.79□□□□□ -1.96
NEMF-215ENST00000557380 KRTAP2-1Q9BYU5 128 aa2.79□□□□□ -1.96
NEMF-215ENST00000557380 KRTAP5-8O75690 187 aa2.74□□□□□ -1.97
NEMF-215ENST00000557380 MDN1Q9NU22 5596 aa2.73□□□□□ -1.97
NEMF-215ENST00000557380 INE1O15225 51 aa2.71□□□□□ -1.98
NEMF-215ENST00000557380 SPRR2EP22531 72 aa2.69□□□□□ -1.98
NEMF-215ENST00000557380 SPRR2BP35325 72 aa2.69□□□□□ -1.98
NEMF-215ENST00000557380 SPRR2AP35326 72 aa2.69□□□□□ -1.98
NEMF-215ENST00000557380 DSTQ03001 7570 aaKnown RBP2.66□□□□□ -1.98
NEMF-215ENST00000557380 KRTAP5-5Q701N2 237 aaPredicted RBP2.6□□□□□ -1.99
NEMF-215ENST00000557380 MT1AP04731 61 aa2.59□□□□□ -2
NEMF-215ENST00000557380 SPRR2DP22532 72 aa2.59□□□□□ -2
NEMF-215ENST00000557380 KRTAP6-1Q3LI64 71 aa2.54□□□□□ -2
NEMF-215ENST00000557380 SYNE1Q8NF91 8797 aaKnown RBP2.47□□□□□ -2.01
NEMF-215ENST00000557380 AHNAK2Q8IVF2 5795 aa2.38□□□□□ -2.03
NEMF-215ENST00000557380 LCE1CQ5T751 118 aa2.37□□□□□ -2.03
NEMF-215ENST00000557380 LCE1BQ5T7P3 118 aa2.37□□□□□ -2.03
NEMF-215ENST00000557380 KRTAP12-4P60329 112 aa2.37□□□□□ -2.03
NEMF-215ENST00000557380 KRTAP5-10Q6L8G5 202 aa2.34□□□□□ -2.04
NEMF-215ENST00000557380 LCE3DQ9BYE3 92 aa2.34□□□□□ -2.04
NEMF-215ENST00000557380 KRTAP5-7Q6L8G8 165 aa2.33□□□□□ -2.04
NEMF-215ENST00000557380 KRTAP6-2Q3LI66 62 aa2.31□□□□□ -2.04
NEMF-215ENST00000557380 KRTAP20-2Q3LI61 65 aa2.23□□□□□ -2.05
NEMF-215ENST00000557380 MT4P47944 62 aa2.22□□□□□ -2.05
NEMF-215ENST00000557380 AHNAKQ09666 5890 aaKnown RBP2.18□□□□□ -2.06
NEMF-215ENST00000557380 MUC5BQ9HC84 5762 aaPredicted RBP2.13□□□□□ -2.07
NEMF-215ENST00000557380 PRM1P04553 51 aa2.05□□□□□ -2.08
NEMF-215ENST00000557380 MUC5ACP98088 5654 aa2.03□□□□□ -2.08
NEMF-215ENST00000557380 MUC19Q7Z5P9 8384 aa2□□□□□ -2.09
NEMF-215ENST00000557380 KRTAP21-2Q3LI59 83 aa1.69□□□□□ -2.14
NEMF-215ENST00000557380 PHGR1C9JFL3 82 aa1.4□□□□□ -2.19
NEMF-215ENST00000557380 KRTAP21-1Q3LI58 79 aa1.31□□□□□ -2.2
NEMF-215ENST00000557380 MUC16Q8WXI7 14507 aa0.93□□□□□ -2.26
Retrieved 78 of 20,778 RNA–protein pairs in 6.8 ms