RNA–Protein interactions for RNA: ENST00000556658.1

RGMA-208, Transcript of repulsive guidance molecule BMP co-receptor a, humanhuman

TSL 1 (best) BASIC

Gene RGMA, Length 1,889 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGMA-208ENST00000556658 KRTAP6-3Q3LI67 103 aa7.13□□□□□ -1.27
RGMA-208ENST00000556658 MT1LQ93083 61 aa7.09□□□□□ -1.28
RGMA-208ENST00000556658 MUC12Q9UKN1 5478 aa7.06□□□□□ -1.28
RGMA-208ENST00000556658 KRTAP19-4Q3LI73 84 aa7.04□□□□□ -1.28
RGMA-208ENST00000556658 KRTAP19-3Q7Z4W3 81 aa7.01□□□□□ -1.29
RGMA-208ENST00000556658 KRTAP9-7A8MTY7 169 aa6.96□□□□□ -1.29
RGMA-208ENST00000556658 MT1GP13640 62 aa6.96□□□□□ -1.29
RGMA-208ENST00000556658 INE1O15225 51 aa6.96□□□□□ -1.3
RGMA-208ENST00000556658 LCE3CQ5T5A8 94 aa6.96□□□□□ -1.3
RGMA-208ENST00000556658 LCE1AQ5T7P2 110 aa6.91□□□□□ -1.3
RGMA-208ENST00000556658 SPRR2EP22531 72 aa6.9□□□□□ -1.3
RGMA-208ENST00000556658 SPRR2BP35325 72 aa6.9□□□□□ -1.3
RGMA-208ENST00000556658 SPRR2AP35326 72 aa6.9□□□□□ -1.3
RGMA-208ENST00000556658 LCE5AQ5TCM9 118 aa6.9□□□□□ -1.31
RGMA-208ENST00000556658 SPRR5A0A1B0GTR4 108 aa6.87□□□□□ -1.31
RGMA-208ENST00000556658 MDN1Q9NU22 5596 aa6.87□□□□□ -1.31
RGMA-208ENST00000556658 MT1MQ8N339 61 aa6.84□□□□□ -1.31
RGMA-208ENST00000556658 KRTAP4-7Q9BYR0 210 aa6.82□□□□□ -1.32
RGMA-208ENST00000556658 KRTAP4-3Q9BYR4 195 aa6.67□□□□□ -1.34
RGMA-208ENST00000556658 SPRR2DP22532 72 aa6.65□□□□□ -1.34
RGMA-208ENST00000556658 NEBP20929 6669 aa6.59□□□□□ -1.35
RGMA-208ENST00000556658 KRTAP9-6A8MVA2 160 aa6.54□□□□□ -1.36
RGMA-208ENST00000556658 DSTQ03001 7570 aaKnown RBP6.54□□□□□ -1.36
RGMA-208ENST00000556658 LOC100996750A0A140TA64 210 aa6.42□□□□□ -1.38
RGMA-208ENST00000556658 LCE3BQ5TA77 95 aa6.4□□□□□ -1.39
RGMA-208ENST00000556658 KRTAP2-3P0C7H8 128 aa6.27□□□□□ -1.41
RGMA-208ENST00000556658 KRTAP2-4Q9BYR9 128 aa6.27□□□□□ -1.41
RGMA-208ENST00000556658 KRTAP20-1Q3LI63 56 aa6.18□□□□□ -1.42
RGMA-208ENST00000556658 KRTAP5-5Q701N2 237 aaPredicted RBP6.16□□□□□ -1.42
RGMA-208ENST00000556658 KRTAP2-2Q9BYT5 123 aa6.13□□□□□ -1.43
RGMA-208ENST00000556658 KRTAP2-1Q9BYU5 128 aa6.13□□□□□ -1.43
RGMA-208ENST00000556658 MT1AP04731 61 aa6.03□□□□□ -1.44
RGMA-208ENST00000556658 KRTAP6-1Q3LI64 71 aa5.96□□□□□ -1.45
RGMA-208ENST00000556658 KRTAP5-4Q6L8H1 288 aa5.96□□□□□ -1.46
RGMA-208ENST00000556658 LCE4AQ5TA78 99 aa5.91□□□□□ -1.46
RGMA-208ENST00000556658 KRTAP12-4P60329 112 aa5.83□□□□□ -1.48
RGMA-208ENST00000556658 SYNE1Q8NF91 8797 aaKnown RBP5.82□□□□□ -1.48
RGMA-208ENST00000556658 MT4P47944 62 aa5.77□□□□□ -1.49
RGMA-208ENST00000556658 KRTAP9-4Q9BYQ2 154 aa5.75□□□□□ -1.49
RGMA-208ENST00000556658 KRTAP4-9Q9BYQ8 210 aa5.73□□□□□ -1.49
RGMA-208ENST00000556658 KRTAP4-6Q9BYQ5 205 aa5.69□□□□□ -1.5
RGMA-208ENST00000556658 LCE1DQ5T752 114 aa5.68□□□□□ -1.5
RGMA-208ENST00000556658 KRTAP20-2Q3LI61 65 aa5.58□□□□□ -1.52
RGMA-208ENST00000556658 HMCN1Q96RW7 5635 aa5.56□□□□□ -1.52
RGMA-208ENST00000556658 KRTAP6-2Q3LI66 62 aa5.53□□□□□ -1.52
RGMA-208ENST00000556658 MT3P25713 68 aa5.5□□□□□ -1.53
RGMA-208ENST00000556658 KRTAP5-2Q701N4 177 aa5.37□□□□□ -1.55
RGMA-208ENST00000556658 KRTAP5-3Q6L8H2 238 aa5.37□□□□□ -1.55
RGMA-208ENST00000556658 LCE3DQ9BYE3 92 aa5.22□□□□□ -1.57
RGMA-208ENST00000556658 LCE3EQ5T5B0 92 aa5.05□□□□□ -1.6
RGMA-208ENST00000556658 OBSCNQ5VST9 7968 aa5.04□□□□□ -1.6
RGMA-208ENST00000556658 AHNAK2Q8IVF2 5795 aa4.97□□□□□ -1.61
RGMA-208ENST00000556658 KRTAP4-11Q9BYQ6 195 aa4.88□□□□□ -1.63
RGMA-208ENST00000556658 LCE1EQ5T753 118 aa4.81□□□□□ -1.64
RGMA-208ENST00000556658 KRTAP5-10Q6L8G5 202 aa4.77□□□□□ -1.65
RGMA-208ENST00000556658 KRTAP5-8O75690 187 aa4.68□□□□□ -1.66
RGMA-208ENST00000556658 KRTAP5-1Q6L8H4 278 aa4.66□□□□□ -1.66
RGMA-208ENST00000556658 GPR98Q8WXG9 6306 aa4.58□□□□□ -1.68
RGMA-208ENST00000556658 KRTAP5-7Q6L8G8 165 aa4.52□□□□□ -1.69
RGMA-208ENST00000556658 LCE1BQ5T7P3 118 aa4.51□□□□□ -1.69
RGMA-208ENST00000556658 LCE1CQ5T751 118 aa4.47□□□□□ -1.69
RGMA-208ENST00000556658 MUC5ACP98088 5654 aa4.45□□□□□ -1.7
RGMA-208ENST00000556658 KRTAP4-2Q9BYR5 136 aa4.45□□□□□ -1.7
RGMA-208ENST00000556658 PRM1P04553 51 aa4.37□□□□□ -1.71
RGMA-208ENST00000556658 KRTAP9-9Q9BYP9 154 aa4.3□□□□□ -1.72
RGMA-208ENST00000556658 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.15□□□□□ -1.74
RGMA-208ENST00000556658 LCE1FQ5T754 118 aa4.13□□□□□ -1.75
RGMA-208ENST00000556658 MUC5BQ9HC84 5762 aaPredicted RBP3.99□□□□□ -1.77
RGMA-208ENST00000556658 KRTAP5-11Q6L8G4 156 aa3.94□□□□□ -1.78
RGMA-208ENST00000556658 KRTAP21-2Q3LI59 83 aa3.9□□□□□ -1.78
RGMA-208ENST00000556658 AHNAKQ09666 5890 aaKnown RBP3.78□□□□□ -1.8
RGMA-208ENST00000556658 KRTAP4-12Q9BQ66 201 aa3.74□□□□□ -1.81
RGMA-208ENST00000556658 KRTAP4-4Q9BYR3 166 aa3.48□□□□□ -1.85
RGMA-208ENST00000556658 PHGR1C9JFL3 82 aa3.39□□□□□ -1.87
RGMA-208ENST00000556658 MUC19Q7Z5P9 8384 aa3.02□□□□□ -1.93
RGMA-208ENST00000556658 KRTAP21-1Q3LI58 79 aa2.96□□□□□ -1.94
RGMA-208ENST00000556658 MUC16Q8WXI7 14507 aa2.19□□□□□ -2.06
Retrieved 77 of 20,778 RNA–protein pairs in 66.2 ms