RNA–Protein interactions for RNA: ENST00000556343.1

ACTN1-218, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 274 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-218ENST00000556343 SPRR2EP22531 72 aa3.3□□□□□ -1.88
ACTN1-218ENST00000556343 SPRR2BP35325 72 aa3.3□□□□□ -1.88
ACTN1-218ENST00000556343 SPRR2AP35326 72 aa3.3□□□□□ -1.88
ACTN1-218ENST00000556343 KRTAP19-3Q7Z4W3 81 aa3.29□□□□□ -1.88
ACTN1-218ENST00000556343 MT1GP13640 62 aa3.28□□□□□ -1.88
ACTN1-218ENST00000556343 MT1LQ93083 61 aa3.28□□□□□ -1.88
ACTN1-218ENST00000556343 MUC12Q9UKN1 5478 aa3.28□□□□□ -1.88
ACTN1-218ENST00000556343 MDN1Q9NU22 5596 aa3.27□□□□□ -1.89
ACTN1-218ENST00000556343 LCE1AQ5T7P2 110 aa3.26□□□□□ -1.89
ACTN1-218ENST00000556343 LCE5AQ5TCM9 118 aa3.23□□□□□ -1.89
ACTN1-218ENST00000556343 SPRR2DP22532 72 aa3.2□□□□□ -1.9
ACTN1-218ENST00000556343 LCE3CQ5T5A8 94 aa3.19□□□□□ -1.9
ACTN1-218ENST00000556343 NEBP20929 6669 aa3.19□□□□□ -1.9
ACTN1-218ENST00000556343 MT1MQ8N339 61 aa3.18□□□□□ -1.9
ACTN1-218ENST00000556343 KRTAP4-7Q9BYR0 210 aa3.1□□□□□ -1.91
ACTN1-218ENST00000556343 H3BS24 57 aa3.08□□□□□ -1.92
ACTN1-218ENST00000556343 KRTAP2-3P0C7H8 128 aa3.07□□□□□ -1.92
ACTN1-218ENST00000556343 LCE3BQ5TA77 95 aa3.07□□□□□ -1.92
ACTN1-218ENST00000556343 KRTAP2-4Q9BYR9 128 aa3.07□□□□□ -1.92
ACTN1-218ENST00000556343 KRTAP4-3Q9BYR4 195 aa3.05□□□□□ -1.92
ACTN1-218ENST00000556343 KRTAP20-1Q3LI63 56 aa3.04□□□□□ -1.92
ACTN1-218ENST00000556343 SPRR5A0A1B0GTR4 108 aa3.02□□□□□ -1.93
ACTN1-218ENST00000556343 LUZP6Q538Z0 58 aa3□□□□□ -1.93
ACTN1-218ENST00000556343 KRTAP2-2Q9BYT5 123 aa3□□□□□ -1.93
ACTN1-218ENST00000556343 KRTAP2-1Q9BYU5 128 aa3□□□□□ -1.93
ACTN1-218ENST00000556343 NDUFAF8A1L188 74 aa2.95□□□□□ -1.94
ACTN1-218ENST00000556343 DSTQ03001 7570 aaKnown RBP2.93□□□□□ -1.94
ACTN1-218ENST00000556343 LOC100996750A0A140TA64 210 aa2.92□□□□□ -1.94
ACTN1-218ENST00000556343 KRTAP9-6A8MVA2 160 aa2.92□□□□□ -1.94
ACTN1-218ENST00000556343 LCE4AQ5TA78 99 aa2.86□□□□□ -1.95
ACTN1-218ENST00000556343 KRTAP5-5Q701N2 237 aaPredicted RBP2.85□□□□□ -1.95
ACTN1-218ENST00000556343 MT1AP04731 61 aa2.81□□□□□ -1.96
ACTN1-218ENST00000556343 KRTAP5-4Q6L8H1 288 aa2.81□□□□□ -1.96
ACTN1-218ENST00000556343 KRTAP12-4P60329 112 aa2.8□□□□□ -1.96
ACTN1-218ENST00000556343 KRTAP6-1Q3LI64 71 aa2.75□□□□□ -1.97
ACTN1-218ENST00000556343 MT4P47944 62 aa2.74□□□□□ -1.97
ACTN1-218ENST00000556343 KRTAP4-9Q9BYQ8 210 aa2.72□□□□□ -1.97
ACTN1-218ENST00000556343 LCE1DQ5T752 114 aa2.7□□□□□ -1.98
ACTN1-218ENST00000556343 KRTAP9-4Q9BYQ2 154 aa2.7□□□□□ -1.98
ACTN1-218ENST00000556343 SYNE1Q8NF91 8797 aaKnown RBP2.7□□□□□ -1.98
ACTN1-218ENST00000556343 A0A0A0MQY5 61 aa2.67□□□□□ -1.98
ACTN1-218ENST00000556343 KRTAP4-6Q9BYQ5 205 aa2.67□□□□□ -1.98
ACTN1-218ENST00000556343 HMCN1Q96RW7 5635 aa2.66□□□□□ -1.98
ACTN1-218ENST00000556343 KRTAP20-2Q3LI61 65 aa2.64□□□□□ -1.99
ACTN1-218ENST00000556343 MT3P25713 68 aa2.6□□□□□ -1.99
ACTN1-218ENST00000556343 KRTAP6-2Q3LI66 62 aa2.56□□□□□ -2
ACTN1-218ENST00000556343 KRTAP5-3Q6L8H2 238 aa2.53□□□□□ -2
ACTN1-218ENST00000556343 KRTAP5-2Q701N4 177 aa2.52□□□□□ -2.01
ACTN1-218ENST00000556343 INE1O15225 51 aa2.46□□□□□ -2.02
ACTN1-218ENST00000556343 AHNAK2Q8IVF2 5795 aa2.44□□□□□ -2.02
ACTN1-218ENST00000556343 LCE3DQ9BYE3 92 aa2.4□□□□□ -2.03
ACTN1-218ENST00000556343 KRTAP4-11Q9BYQ6 195 aa2.34□□□□□ -2.03
ACTN1-218ENST00000556343 LCE3EQ5T5B0 92 aa2.32□□□□□ -2.04
ACTN1-218ENST00000556343 KRTAP5-10Q6L8G5 202 aa2.32□□□□□ -2.04
ACTN1-218ENST00000556343 GPR98Q8WXG9 6306 aa2.3□□□□□ -2.04
ACTN1-218ENST00000556343 LCE1EQ5T753 118 aa2.28□□□□□ -2.04
ACTN1-218ENST00000556343 OBSCNQ5VST9 7968 aa2.25□□□□□ -2.05
ACTN1-218ENST00000556343 KRTAP5-8O75690 187 aa2.22□□□□□ -2.05
ACTN1-218ENST00000556343 KRTAP5-7Q6L8G8 165 aa2.2□□□□□ -2.06
ACTN1-218ENST00000556343 KRTAP5-1Q6L8H4 278 aa2.19□□□□□ -2.06
ACTN1-218ENST00000556343 MUC5ACP98088 5654 aa2.16□□□□□ -2.06
ACTN1-218ENST00000556343 LCE1BQ5T7P3 118 aa2.12□□□□□ -2.07
ACTN1-218ENST00000556343 KRTAP9-9Q9BYP9 154 aa2.12□□□□□ -2.07
ACTN1-218ENST00000556343 LCE1CQ5T751 118 aa2.11□□□□□ -2.07
ACTN1-218ENST00000556343 KRTAP4-2Q9BYR5 136 aa2.06□□□□□ -2.08
ACTN1-218ENST00000556343 MUC5BQ9HC84 5762 aaPredicted RBP1.99□□□□□ -2.09
ACTN1-218ENST00000556343 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.95□□□□□ -2.1
ACTN1-218ENST00000556343 PRM1P04553 51 aa1.92□□□□□ -2.1
ACTN1-218ENST00000556343 AHNAKQ09666 5890 aaKnown RBP1.91□□□□□ -2.1
ACTN1-218ENST00000556343 KRTAP5-11Q6L8G4 156 aa1.86□□□□□ -2.11
ACTN1-218ENST00000556343 KRTAP21-2Q3LI59 83 aa1.8□□□□□ -2.12
ACTN1-218ENST00000556343 LCE1FQ5T754 118 aa1.77□□□□□ -2.13
ACTN1-218ENST00000556343 KRTAP4-12Q9BQ66 201 aa1.75□□□□□ -2.13
ACTN1-218ENST00000556343 PHGR1C9JFL3 82 aa1.59□□□□□ -2.15
ACTN1-218ENST00000556343 KRTAP4-4Q9BYR3 166 aa1.59□□□□□ -2.15
ACTN1-218ENST00000556343 MUC19Q7Z5P9 8384 aa1.32□□□□□ -2.2
ACTN1-218ENST00000556343 KRTAP21-1Q3LI58 79 aa1.15□□□□□ -2.23
ACTN1-218ENST00000556343 MUC16Q8WXI7 14507 aa1.03□□□□□ -2.24
Retrieved 78 of 20,778 RNA–protein pairs in 285 ms