RNA–Protein interactions for RNA: ENST00000556262.5

SDR39U1-218, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 2

Gene SDR39U1, Length 1,960 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-218ENST00000556262 MUC12Q9UKN1 5478 aa6.7□□□□□ -1.34
SDR39U1-218ENST00000556262 KRTAP19-4Q3LI73 84 aa6.62□□□□□ -1.35
SDR39U1-218ENST00000556262 MT1LQ93083 61 aa6.62□□□□□ -1.35
SDR39U1-218ENST00000556262 KRTAP9-7A8MTY7 169 aa6.6□□□□□ -1.35
SDR39U1-218ENST00000556262 LCE3CQ5T5A8 94 aa6.58□□□□□ -1.36
SDR39U1-218ENST00000556262 SPRR2FQ96RM1 72 aa6.57□□□□□ -1.36
SDR39U1-218ENST00000556262 KRTAP4-7Q9BYR0 210 aa6.52□□□□□ -1.37
SDR39U1-218ENST00000556262 INE1O15225 51 aa6.45□□□□□ -1.38
SDR39U1-218ENST00000556262 KRTAP19-3Q7Z4W3 81 aa6.44□□□□□ -1.38
SDR39U1-218ENST00000556262 MDN1Q9NU22 5596 aa6.43□□□□□ -1.38
SDR39U1-218ENST00000556262 KRTAP6-3Q3LI67 103 aa6.42□□□□□ -1.38
SDR39U1-218ENST00000556262 KRTAP5-9P26371 169 aa6.4□□□□□ -1.38
SDR39U1-218ENST00000556262 MT1GP13640 62 aa6.37□□□□□ -1.39
SDR39U1-218ENST00000556262 MT1MQ8N339 61 aa6.34□□□□□ -1.39
SDR39U1-218ENST00000556262 LCE5AQ5TCM9 118 aa6.33□□□□□ -1.4
SDR39U1-218ENST00000556262 KRTAP4-3Q9BYR4 195 aa6.32□□□□□ -1.4
SDR39U1-218ENST00000556262 KRTAP9-6A8MVA2 160 aa6.3□□□□□ -1.4
SDR39U1-218ENST00000556262 NEBP20929 6669 aa6.26□□□□□ -1.41
SDR39U1-218ENST00000556262 LCE1AQ5T7P2 110 aa6.25□□□□□ -1.41
SDR39U1-218ENST00000556262 DSTQ03001 7570 aaKnown RBP6.23□□□□□ -1.41
SDR39U1-218ENST00000556262 SPRR2EP22531 72 aa6.19□□□□□ -1.42
SDR39U1-218ENST00000556262 SPRR2BP35325 72 aa6.19□□□□□ -1.42
SDR39U1-218ENST00000556262 SPRR2AP35326 72 aa6.19□□□□□ -1.42
SDR39U1-218ENST00000556262 LOC100996750A0A140TA64 210 aa6.12□□□□□ -1.43
SDR39U1-218ENST00000556262 KRTAP2-3P0C7H8 128 aa6.07□□□□□ -1.44
SDR39U1-218ENST00000556262 KRTAP2-4Q9BYR9 128 aa6.07□□□□□ -1.44
SDR39U1-218ENST00000556262 KRTAP2-1Q9BYU5 128 aa6.07□□□□□ -1.44
SDR39U1-218ENST00000556262 SPRR2DP22532 72 aa5.95□□□□□ -1.46
SDR39U1-218ENST00000556262 KRTAP20-1Q3LI63 56 aa5.8□□□□□ -1.48
SDR39U1-218ENST00000556262 LCE3BQ5TA77 95 aa5.71□□□□□ -1.5
SDR39U1-218ENST00000556262 KRTAP5-5Q701N2 237 aaPredicted RBP5.69□□□□□ -1.5
SDR39U1-218ENST00000556262 KRTAP6-1Q3LI64 71 aa5.6□□□□□ -1.51
SDR39U1-218ENST00000556262 MT1AP04731 61 aa5.58□□□□□ -1.52
SDR39U1-218ENST00000556262 KRTAP2-2Q9BYT5 123 aa5.56□□□□□ -1.52
SDR39U1-218ENST00000556262 SYNE1Q8NF91 8797 aaKnown RBP5.5□□□□□ -1.53
SDR39U1-218ENST00000556262 KRTAP5-4Q6L8H1 288 aa5.36□□□□□ -1.55
SDR39U1-218ENST00000556262 KRTAP9-4Q9BYQ2 154 aa5.31□□□□□ -1.56
SDR39U1-218ENST00000556262 KRTAP4-9Q9BYQ8 210 aa5.29□□□□□ -1.56
SDR39U1-218ENST00000556262 KRTAP12-4P60329 112 aa5.27□□□□□ -1.57
SDR39U1-218ENST00000556262 LCE4AQ5TA78 99 aa5.27□□□□□ -1.57
SDR39U1-218ENST00000556262 MT4P47944 62 aa5.22□□□□□ -1.57
SDR39U1-218ENST00000556262 KRTAP4-6Q9BYQ5 205 aa5.2□□□□□ -1.58
SDR39U1-218ENST00000556262 HMCN1Q96RW7 5635 aa5.18□□□□□ -1.58
SDR39U1-218ENST00000556262 KRTAP6-2Q3LI66 62 aa5.15□□□□□ -1.58
SDR39U1-218ENST00000556262 LCE1DQ5T752 114 aa5.15□□□□□ -1.59
SDR39U1-218ENST00000556262 MT3P25713 68 aa5.05□□□□□ -1.6
SDR39U1-218ENST00000556262 KRTAP20-2Q3LI61 65 aa5.05□□□□□ -1.6
SDR39U1-218ENST00000556262 LCE3DQ9BYE3 92 aa5.04□□□□□ -1.6
SDR39U1-218ENST00000556262 LCE3EQ5T5B0 92 aa4.97□□□□□ -1.61
SDR39U1-218ENST00000556262 OBSCNQ5VST9 7968 aa4.94□□□□□ -1.62
SDR39U1-218ENST00000556262 KRTAP5-2Q701N4 177 aa4.89□□□□□ -1.63
SDR39U1-218ENST00000556262 KRTAP5-3Q6L8H2 238 aa4.85□□□□□ -1.63
SDR39U1-218ENST00000556262 AHNAK2Q8IVF2 5795 aa4.79□□□□□ -1.64
SDR39U1-218ENST00000556262 GPR98Q8WXG9 6306 aa4.74□□□□□ -1.65
SDR39U1-218ENST00000556262 PRM1P04553 51 aa4.67□□□□□ -1.66
SDR39U1-218ENST00000556262 KRTAP5-10Q6L8G5 202 aa4.53□□□□□ -1.68
SDR39U1-218ENST00000556262 LCE1EQ5T753 118 aa4.39□□□□□ -1.71
SDR39U1-218ENST00000556262 KRTAP4-11Q9BYQ6 195 aa4.35□□□□□ -1.71
SDR39U1-218ENST00000556262 KRTAP5-7Q6L8G8 165 aa4.24□□□□□ -1.73
SDR39U1-218ENST00000556262 KRTAP5-1Q6L8H4 278 aa4.24□□□□□ -1.73
SDR39U1-218ENST00000556262 KRTAP5-8O75690 187 aa4.21□□□□□ -1.74
SDR39U1-218ENST00000556262 MUC5ACP98088 5654 aa4.2□□□□□ -1.74
SDR39U1-218ENST00000556262 LCE1BQ5T7P3 118 aa4.18□□□□□ -1.74
SDR39U1-218ENST00000556262 KRTAP4-2Q9BYR5 136 aa4.1□□□□□ -1.75
SDR39U1-218ENST00000556262 LCE1CQ5T751 118 aa4.09□□□□□ -1.76
SDR39U1-218ENST00000556262 MUC5BQ9HC84 5762 aaPredicted RBP3.92□□□□□ -1.78
SDR39U1-218ENST00000556262 KRTAP9-9Q9BYP9 154 aa3.87□□□□□ -1.79
SDR39U1-218ENST00000556262 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.83□□□□□ -1.8
SDR39U1-218ENST00000556262 AHNAKQ09666 5890 aaKnown RBP3.77□□□□□ -1.81
SDR39U1-218ENST00000556262 KRTAP21-2Q3LI59 83 aa3.65□□□□□ -1.82
SDR39U1-218ENST00000556262 KRTAP5-11Q6L8G4 156 aa3.6□□□□□ -1.83
SDR39U1-218ENST00000556262 KRTAP4-12Q9BQ66 201 aa3.46□□□□□ -1.86
SDR39U1-218ENST00000556262 KRTAP4-4Q9BYR3 166 aa3.32□□□□□ -1.88
SDR39U1-218ENST00000556262 LCE1FQ5T754 118 aa3.25□□□□□ -1.89
SDR39U1-218ENST00000556262 PHGR1C9JFL3 82 aa3.08□□□□□ -1.92
SDR39U1-218ENST00000556262 KRTAP21-1Q3LI58 79 aa2.98□□□□□ -1.93
SDR39U1-218ENST00000556262 MUC19Q7Z5P9 8384 aa2.93□□□□□ -1.94
SDR39U1-218ENST00000556262 MUC16Q8WXI7 14507 aa1.98□□□□□ -2.09
Retrieved 78 of 20,778 RNA–protein pairs in 69.4 ms