RNA–Protein interactions for RNA: ENST00000555405.5

NEK9-205, Transcript of NIMA related kinase 9, humanhuman

TSL 1 (best)

Gene NEK9, Length 3,357 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-205ENST00000555405 PP632Q6XCG6 107 aa3.85□□□□□ -1.79
NEK9-205ENST00000555405 SPRR2FQ96RM1 72 aa3.84□□□□□ -1.79
NEK9-205ENST00000555405 KRTAP12-3P60328 96 aa3.83□□□□□ -1.8
NEK9-205ENST00000555405 NDUFAF8A1L188 74 aa3.82□□□□□ -1.8
NEK9-205ENST00000555405 KRTAP19-7Q3SYF9 63 aa3.74□□□□□ -1.81
NEK9-205ENST00000555405 KRTAP23-1A1A580 65 aa3.73□□□□□ -1.81
NEK9-205ENST00000555405 KRTAP4-9Q9BYQ8 210 aa3.72□□□□□ -1.81
NEK9-205ENST00000555405 MDN1Q9NU22 5596 aa3.72□□□□□ -1.81
NEK9-205ENST00000555405 KRTAP4-2Q9BYR5 136 aa3.72□□□□□ -1.81
NEK9-205ENST00000555405 DSTQ03001 7570 aaKnown RBP3.71□□□□□ -1.81
NEK9-205ENST00000555405 KRTAP15-1Q3LI76 137 aa3.7□□□□□ -1.82
NEK9-205ENST00000555405 MT1EP04732 61 aa3.69□□□□□ -1.82
NEK9-205ENST00000555405 KRTAP9-7A8MTY7 169 aa3.68□□□□□ -1.82
NEK9-205ENST00000555405 LUZP6Q538Z0 58 aa3.65□□□□□ -1.82
NEK9-205ENST00000555405 SPRR2EP22531 72 aa3.64□□□□□ -1.83
NEK9-205ENST00000555405 SPRR2BP35325 72 aa3.64□□□□□ -1.83
NEK9-205ENST00000555405 SPRR2AP35326 72 aa3.64□□□□□ -1.83
NEK9-205ENST00000555405 KRTAP6-3Q3LI67 103 aa3.61□□□□□ -1.83
NEK9-205ENST00000555405 MT1LQ93083 61 aa3.61□□□□□ -1.83
NEK9-205ENST00000555405 KRTAP4-11Q9BYQ6 195 aa3.58□□□□□ -1.84
NEK9-205ENST00000555405 LCE4AQ5TA78 99 aa3.57□□□□□ -1.84
NEK9-205ENST00000555405 KRTAP19-3Q7Z4W3 81 aa3.57□□□□□ -1.84
NEK9-205ENST00000555405 KRTAP5-9P26371 169 aa3.57□□□□□ -1.84
NEK9-205ENST00000555405 KRTAP4-3Q9BYR4 195 aa3.57□□□□□ -1.84
NEK9-205ENST00000555405 LCE1AQ5T7P2 110 aa3.55□□□□□ -1.84
NEK9-205ENST00000555405 LCE3CQ5T5A8 94 aa3.52□□□□□ -1.85
NEK9-205ENST00000555405 MT1GP13640 62 aa3.52□□□□□ -1.85
NEK9-205ENST00000555405 KRTAP5-3Q6L8H2 238 aa3.5□□□□□ -1.85
NEK9-205ENST00000555405 MT1MQ8N339 61 aa3.49□□□□□ -1.85
NEK9-205ENST00000555405 SPRR2DP22532 72 aa3.49□□□□□ -1.85
NEK9-205ENST00000555405 LCE5AQ5TCM9 118 aa3.47□□□□□ -1.85
NEK9-205ENST00000555405 NEBP20929 6669 aa3.43□□□□□ -1.86
NEK9-205ENST00000555405 KRTAP9-6A8MVA2 160 aa3.35□□□□□ -1.87
NEK9-205ENST00000555405 SYNE1Q8NF91 8797 aaKnown RBP3.33□□□□□ -1.88
NEK9-205ENST00000555405 KRTAP19-4Q3LI73 84 aa3.29□□□□□ -1.88
NEK9-205ENST00000555405 SPRR5A0A1B0GTR4 108 aa3.27□□□□□ -1.89
NEK9-205ENST00000555405 KRTAP20-1Q3LI63 56 aa3.24□□□□□ -1.89
NEK9-205ENST00000555405 KRTAP2-3P0C7H8 128 aa3.22□□□□□ -1.89
NEK9-205ENST00000555405 KRTAP2-4Q9BYR9 128 aa3.22□□□□□ -1.89
NEK9-205ENST00000555405 OBSCNQ5VST9 7968 aa3.21□□□□□ -1.9
NEK9-205ENST00000555405 KRTAP2-2Q9BYT5 123 aa3.15□□□□□ -1.9
NEK9-205ENST00000555405 KRTAP2-1Q9BYU5 128 aa3.15□□□□□ -1.9
NEK9-205ENST00000555405 MT4P47944 62 aa3.14□□□□□ -1.91
NEK9-205ENST00000555405 KRTAP6-1Q3LI64 71 aa3.09□□□□□ -1.91
NEK9-205ENST00000555405 MT1AP04731 61 aa3.03□□□□□ -1.92
NEK9-205ENST00000555405 KRTAP5-5Q701N2 237 aaPredicted RBP3.03□□□□□ -1.92
NEK9-205ENST00000555405 KRTAP12-4P60329 112 aa3.01□□□□□ -1.93
NEK9-205ENST00000555405 HMCN1Q96RW7 5635 aa2.95□□□□□ -1.94
NEK9-205ENST00000555405 KRTAP5-4Q6L8H1 288 aa2.93□□□□□ -1.94
NEK9-205ENST00000555405 KRTAP6-2Q3LI66 62 aa2.89□□□□□ -1.95
NEK9-205ENST00000555405 KRTAP20-2Q3LI61 65 aa2.85□□□□□ -1.95
NEK9-205ENST00000555405 MT3P25713 68 aa2.8□□□□□ -1.96
NEK9-205ENST00000555405 INE1O15225 51 aa2.75□□□□□ -1.97
NEK9-205ENST00000555405 LCE3DQ9BYE3 92 aa2.68□□□□□ -1.98
NEK9-205ENST00000555405 LCE1FQ5T754 118 aa2.63□□□□□ -1.99
NEK9-205ENST00000555405 KRTAP5-2Q701N4 177 aa2.62□□□□□ -1.99
NEK9-205ENST00000555405 AHNAK2Q8IVF2 5795 aa2.6□□□□□ -1.99
NEK9-205ENST00000555405 LCE3EQ5T5B0 92 aa2.58□□□□□ -2
NEK9-205ENST00000555405 GPR98Q8WXG9 6306 aa2.56□□□□□ -2
NEK9-205ENST00000555405 LCE1BQ5T7P3 118 aa2.48□□□□□ -2.01
NEK9-205ENST00000555405 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.48□□□□□ -2.01
NEK9-205ENST00000555405 MUC5ACP98088 5654 aa2.45□□□□□ -2.02
NEK9-205ENST00000555405 KRTAP5-10Q6L8G5 202 aa2.42□□□□□ -2.02
NEK9-205ENST00000555405 KRTAP5-11Q6L8G4 156 aa2.42□□□□□ -2.02
NEK9-205ENST00000555405 KRTAP5-8O75690 187 aa2.38□□□□□ -2.03
NEK9-205ENST00000555405 KRTAP5-1Q6L8H4 278 aa2.34□□□□□ -2.03
NEK9-205ENST00000555405 LCE1EQ5T753 118 aa2.32□□□□□ -2.04
NEK9-205ENST00000555405 PRM1P04553 51 aa2.26□□□□□ -2.05
NEK9-205ENST00000555405 MUC19Q7Z5P9 8384 aa2.26□□□□□ -2.05
NEK9-205ENST00000555405 MUC5BQ9HC84 5762 aaPredicted RBP2.25□□□□□ -2.05
NEK9-205ENST00000555405 KRTAP5-7Q6L8G8 165 aa2.21□□□□□ -2.06
NEK9-205ENST00000555405 LCE1CQ5T751 118 aa2.18□□□□□ -2.06
NEK9-205ENST00000555405 KRTAP4-4Q9BYR3 166 aa2.14□□□□□ -2.07
NEK9-205ENST00000555405 AHNAKQ09666 5890 aaKnown RBP1.99□□□□□ -2.09
NEK9-205ENST00000555405 KRTAP21-2Q3LI59 83 aa1.95□□□□□ -2.1
NEK9-205ENST00000555405 PHGR1C9JFL3 82 aa1.67□□□□□ -2.14
NEK9-205ENST00000555405 KRTAP21-1Q3LI58 79 aa1.32□□□□□ -2.2
NEK9-205ENST00000555405 MUC16Q8WXI7 14507 aa1.06□□□□□ -2.24
Retrieved 78 of 20,778 RNA–protein pairs in 106 ms