RNA–Protein interactions for RNA: ENST00000555017.5

SEC23A-208, Transcript of Sec23 homolog A, coat complex II component, humanhuman

TSL 4

Gene SEC23A, Length 588 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23A-208ENST00000555017 SPRR2GQ9BYE4 73 aa1.35□□□□□ -2.19
SEC23A-208ENST00000555017 MUC19Q7Z5P9 8384 aa1.34□□□□□ -2.19
SEC23A-208ENST00000555017 KRTAP19-8Q3LI54 63 aa1.34□□□□□ -2.19
SEC23A-208ENST00000555017 R4GN34 69 aa1.34□□□□□ -2.19
SEC23A-208ENST00000555017 KRTAP12-1P59990 96 aa1.33□□□□□ -2.2
SEC23A-208ENST00000555017 SPINT4Q6UDR6 99 aa1.32□□□□□ -2.2
SEC23A-208ENST00000555017 MT1XP80297 61 aa1.31□□□□□ -2.2
SEC23A-208ENST00000555017 CRIPTQ9P021 101 aa1.31□□□□□ -2.2
SEC23A-208ENST00000555017 A6NED7 52 aa1.3□□□□□ -2.2
SEC23A-208ENST00000555017 MIR22HGQ0VDD5 57 aa1.3□□□□□ -2.2
SEC23A-208ENST00000555017 CRCT1Q9UGL9 99 aa1.3□□□□□ -2.2
SEC23A-208ENST00000555017 PRO0628Q9UI54 55 aa1.3□□□□□ -2.2
SEC23A-208ENST00000555017 SPRR5A0A1B0GTR4 108 aa1.29□□□□□ -2.2
SEC23A-208ENST00000555017 KRTAP19-6Q3LI70 58 aa1.29□□□□□ -2.2
SEC23A-208ENST00000555017 UQCR11O14957 56 aa1.28□□□□□ -2.2
SEC23A-208ENST00000555017 PLAC4Q8WY50 150 aa1.28□□□□□ -2.2
SEC23A-208ENST00000555017 C10orf95Q9H7T3 257 aa1.28□□□□□ -2.2
SEC23A-208ENST00000555017 BRK1Q8WUW1 75 aa1.27□□□□□ -2.21
SEC23A-208ENST00000555017 A6NN06 94 aa1.26□□□□□ -2.21
SEC23A-208ENST00000555017 USH2AO75445 5202 aa1.26□□□□□ -2.21
SEC23A-208ENST00000555017 CDC42SE1Q9NRR8 79 aa1.25□□□□□ -2.21
SEC23A-208ENST00000555017 LUZP6Q538Z0 58 aa1.24□□□□□ -2.21
SEC23A-208ENST00000555017 SSPOA2VEC9 5147 aa1.24□□□□□ -2.21
SEC23A-208ENST00000555017 FSIP2Q5CZC0 6907 aa1.21□□□□□ -2.22
SEC23A-208ENST00000555017 ROMO1P60602 79 aa1.19□□□□□ -2.22
SEC23A-208ENST00000555017 KRTAP19-5Q3LI72 72 aa1.19□□□□□ -2.22
SEC23A-208ENST00000555017 KRTAP5-7Q6L8G8 165 aa1.19□□□□□ -2.22
SEC23A-208ENST00000555017 PRO2289Q9P1D8 64 aa1.19□□□□□ -2.22
SEC23A-208ENST00000555017 FCGBPQ9Y6R7 5405 aaPredicted RBP1.18□□□□□ -2.22
SEC23A-208ENST00000555017 K7ERS5 55 aa1.18□□□□□ -2.22
SEC23A-208ENST00000555017 PMAIP1Q13794 54 aa1.18□□□□□ -2.22
SEC23A-208ENST00000555017 TNP1P09430 55 aa1.17□□□□□ -2.22
SEC23A-208ENST00000555017 KRTAP19-7Q3SYF9 63 aa1.17□□□□□ -2.22
SEC23A-208ENST00000555017 KRTAP8-1Q8IUC2 63 aa1.17□□□□□ -2.22
SEC23A-208ENST00000555017 SPRR2FQ96RM1 72 aa1.16□□□□□ -2.22
SEC23A-208ENST00000555017 MT1EP04732 61 aa1.14□□□□□ -2.23
SEC23A-208ENST00000555017 KRTAP25-1Q3LHN0 102 aa1.14□□□□□ -2.23
SEC23A-208ENST00000555017 KRTAP6-3Q3LI67 103 aa1.14□□□□□ -2.23
SEC23A-208ENST00000555017 SPRR2EP22531 72 aa1.12□□□□□ -2.23
SEC23A-208ENST00000555017 SPRR2BP35325 72 aa1.12□□□□□ -2.23
SEC23A-208ENST00000555017 SPRR2AP35326 72 aa1.12□□□□□ -2.23
SEC23A-208ENST00000555017 KRTAP12-3P60328 96 aa1.12□□□□□ -2.23
SEC23A-208ENST00000555017 KRTAP21-2Q3LI59 83 aa1.12□□□□□ -2.23
SEC23A-208ENST00000555017 MT1LQ93083 61 aa1.11□□□□□ -2.23
SEC23A-208ENST00000555017 KMT2DO14686 5537 aa1.09□□□□□ -2.23
SEC23A-208ENST00000555017 KTN1-AS1Q86SY8 53 aa1.09□□□□□ -2.23
SEC23A-208ENST00000555017 MT1MQ8N339 61 aa1.09□□□□□ -2.23
SEC23A-208ENST00000555017 SYNE2Q8WXH0 6885 aaKnown RBP1.08□□□□□ -2.24
SEC23A-208ENST00000555017 KRTAP19-3Q7Z4W3 81 aa1.08□□□□□ -2.24
SEC23A-208ENST00000555017 SPRR2DP22532 72 aa1.07□□□□□ -2.24
SEC23A-208ENST00000555017 MACF1Q9UPN3 7388 aaKnown RBP1.05□□□□□ -2.24
SEC23A-208ENST00000555017 MT1GP13640 62 aa1.05□□□□□ -2.24
SEC23A-208ENST00000555017 KRTAP12-4P60329 112 aa1.03□□□□□ -2.24
SEC23A-208ENST00000555017 KRTAP20-1Q3LI63 56 aa1.02□□□□□ -2.25
SEC23A-208ENST00000555017 MUC12Q9UKN1 5478 aa1.01□□□□□ -2.25
SEC23A-208ENST00000555017 KRTAP2-3P0C7H8 128 aa1□□□□□ -2.25
SEC23A-208ENST00000555017 KRTAP2-4Q9BYR9 128 aa1□□□□□ -2.25
SEC23A-208ENST00000555017 NEBP20929 6669 aa0.99□□□□□ -2.25
SEC23A-208ENST00000555017 KRTAP6-1Q3LI64 71 aa0.97□□□□□ -2.25
SEC23A-208ENST00000555017 KRTAP2-1Q9BYU5 128 aa0.97□□□□□ -2.25
SEC23A-208ENST00000555017 MT4P47944 62 aa0.96□□□□□ -2.26
SEC23A-208ENST00000555017 MT1AP04731 61 aa0.93□□□□□ -2.26
SEC23A-208ENST00000555017 MDN1Q9NU22 5596 aa0.91□□□□□ -2.26
SEC23A-208ENST00000555017 KRTAP20-2Q3LI61 65 aa0.89□□□□□ -2.27
SEC23A-208ENST00000555017 KRTAP6-2Q3LI66 62 aa0.89□□□□□ -2.27
SEC23A-208ENST00000555017 DSTQ03001 7570 aaKnown RBP0.87□□□□□ -2.27
SEC23A-208ENST00000555017 SYNE1Q8NF91 8797 aaKnown RBP0.84□□□□□ -2.27
SEC23A-208ENST00000555017 KRTAP5-10Q6L8G5 202 aa0.8□□□□□ -2.28
SEC23A-208ENST00000555017 INE1O15225 51 aa0.79□□□□□ -2.28
SEC23A-208ENST00000555017 AHNAK2Q8IVF2 5795 aa0.76□□□□□ -2.29
SEC23A-208ENST00000555017 PRM1P04553 51 aa0.65□□□□□ -2.31
SEC23A-208ENST00000555017 GPR98Q8WXG9 6306 aa0.64□□□□□ -2.31
SEC23A-208ENST00000555017 MUC16Q8WXI7 14507 aa0.61□□□□□ -2.31
SEC23A-208ENST00000555017 MUC5ACP98088 5654 aa0.59□□□□□ -2.31
SEC23A-208ENST00000555017 MUC5BQ9HC84 5762 aaPredicted RBP0.57□□□□□ -2.32
SEC23A-208ENST00000555017 AHNAKQ09666 5890 aaKnown RBP0.52□□□□□ -2.33
SEC23A-208ENST00000555017 PHGR1C9JFL3 82 aa0.52□□□□□ -2.33
SEC23A-208ENST00000555017 KRTAP21-1Q3LI58 79 aa0.37□□□□□ -2.35
Retrieved 78 of 20,778 RNA–protein pairs in 178.3 ms