RNA–Protein interactions for RNA: ENST00000554684.5

PPP4R3A-205, Transcript of protein phosphatase 4 regulatory subunit 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PPP4R3A, Length 4,108 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3A-205ENST00000554684 SYNE2Q8WXH0 6885 aaKnown RBP5.69□□□□□ -1.5
PPP4R3A-205ENST00000554684 FCGBPQ9Y6R7 5405 aaPredicted RBP5.68□□□□□ -1.5
PPP4R3A-205ENST00000554684 LCE2DQ5TA82 110 aaPredicted RBP5.65□□□□□ -1.5
PPP4R3A-205ENST00000554684 KRTAP9-6A0A140TA67 174 aa5.63□□□□□ -1.51
PPP4R3A-205ENST00000554684 MT1GP13640 62 aa5.63□□□□□ -1.51
PPP4R3A-205ENST00000554684 SPRR2DP22532 72 aa5.59□□□□□ -1.51
PPP4R3A-205ENST00000554684 SSPOA2VEC9 5147 aa5.56□□□□□ -1.52
PPP4R3A-205ENST00000554684 MACF1Q9UPN3 7388 aaKnown RBP5.52□□□□□ -1.53
PPP4R3A-205ENST00000554684 MT1EP04732 61 aa5.51□□□□□ -1.53
PPP4R3A-205ENST00000554684 KRTAP19-4Q3LI73 84 aa5.49□□□□□ -1.53
PPP4R3A-205ENST00000554684 MUC12Q9UKN1 5478 aa5.48□□□□□ -1.53
PPP4R3A-205ENST00000554684 KRTAP19-3Q7Z4W3 81 aa5.48□□□□□ -1.53
PPP4R3A-205ENST00000554684 MT1LQ93083 61 aa5.48□□□□□ -1.53
PPP4R3A-205ENST00000554684 KRTAP4-3Q9BYR4 195 aa5.47□□□□□ -1.53
PPP4R3A-205ENST00000554684 KRTAP19-7Q3SYF9 63 aa5.41□□□□□ -1.54
PPP4R3A-205ENST00000554684 LCE3BQ5TA77 95 aa5.37□□□□□ -1.55
PPP4R3A-205ENST00000554684 LOC100996750A0A140TA64 210 aa5.33□□□□□ -1.56
PPP4R3A-205ENST00000554684 KRTAP9-7A8MTY7 169 aa5.3□□□□□ -1.56
PPP4R3A-205ENST00000554684 MT1MQ8N339 61 aa5.29□□□□□ -1.56
PPP4R3A-205ENST00000554684 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.28□□□□□ -1.56
PPP4R3A-205ENST00000554684 MT4P47944 62 aa5.15□□□□□ -1.59
PPP4R3A-205ENST00000554684 KRTAP12-4P60329 112 aa5.14□□□□□ -1.59
PPP4R3A-205ENST00000554684 KRTAP9-6A8MVA2 160 aa5.06□□□□□ -1.6
PPP4R3A-205ENST00000554684 LCE1AQ5T7P2 110 aa5.04□□□□□ -1.6
PPP4R3A-205ENST00000554684 KRTAP6-3Q3LI67 103 aa5.03□□□□□ -1.6
PPP4R3A-205ENST00000554684 MDN1Q9NU22 5596 aa4.98□□□□□ -1.61
PPP4R3A-205ENST00000554684 LCE5AQ5TCM9 118 aa4.92□□□□□ -1.62
PPP4R3A-205ENST00000554684 KRTAP4-9Q9BYQ8 210 aa4.87□□□□□ -1.63
PPP4R3A-205ENST00000554684 LCE3DQ9BYE3 92 aa4.85□□□□□ -1.63
PPP4R3A-205ENST00000554684 KRTAP20-1Q3LI63 56 aa4.84□□□□□ -1.63
PPP4R3A-205ENST00000554684 KRTAP2-3P0C7H8 128 aa4.79□□□□□ -1.64
PPP4R3A-205ENST00000554684 KRTAP2-4Q9BYR9 128 aa4.79□□□□□ -1.64
PPP4R3A-205ENST00000554684 KRTAP2-1Q9BYU5 128 aa4.79□□□□□ -1.64
PPP4R3A-205ENST00000554684 LCE3EQ5T5B0 92 aa4.73□□□□□ -1.65
PPP4R3A-205ENST00000554684 MT1AP04731 61 aa4.71□□□□□ -1.66
PPP4R3A-205ENST00000554684 NEBP20929 6669 aa4.7□□□□□ -1.66
PPP4R3A-205ENST00000554684 KRTAP6-1Q3LI64 71 aa4.7□□□□□ -1.66
PPP4R3A-205ENST00000554684 MT3P25713 68 aa4.66□□□□□ -1.66
PPP4R3A-205ENST00000554684 KRTAP5-9P26371 169 aa4.65□□□□□ -1.66
PPP4R3A-205ENST00000554684 KRTAP2-2Q9BYT5 123 aa4.62□□□□□ -1.67
PPP4R3A-205ENST00000554684 LCE1DQ5T752 114 aa4.56□□□□□ -1.68
PPP4R3A-205ENST00000554684 KRTAP6-2Q3LI66 62 aa4.54□□□□□ -1.68
PPP4R3A-205ENST00000554684 LCE1BQ5T7P3 118 aa4.51□□□□□ -1.69
PPP4R3A-205ENST00000554684 PRM1P04553 51 aa4.43□□□□□ -1.7
PPP4R3A-205ENST00000554684 KRTAP9-4Q9BYQ2 154 aa4.38□□□□□ -1.71
PPP4R3A-205ENST00000554684 KRTAP4-6Q9BYQ5 205 aa4.38□□□□□ -1.71
PPP4R3A-205ENST00000554684 LCE4AQ5TA78 99 aa4.36□□□□□ -1.71
PPP4R3A-205ENST00000554684 MUC19Q7Z5P9 8384 aa4.29□□□□□ -1.72
PPP4R3A-205ENST00000554684 GPR98Q8WXG9 6306 aa4.19□□□□□ -1.74
PPP4R3A-205ENST00000554684 KRTAP20-2Q3LI61 65 aa4.07□□□□□ -1.76
PPP4R3A-205ENST00000554684 KRTAP5-5Q701N2 237 aaPredicted RBP3.95□□□□□ -1.78
PPP4R3A-205ENST00000554684 MUC5ACP98088 5654 aa3.94□□□□□ -1.78
PPP4R3A-205ENST00000554684 HMCN1Q96RW7 5635 aa3.91□□□□□ -1.78
PPP4R3A-205ENST00000554684 KRTAP5-4Q6L8H1 288 aa3.71□□□□□ -1.82
PPP4R3A-205ENST00000554684 KRTAP4-11Q9BYQ6 195 aa3.69□□□□□ -1.82
PPP4R3A-205ENST00000554684 KRTAP9-9Q9BYP9 154 aa3.66□□□□□ -1.82
PPP4R3A-205ENST00000554684 LCE1CQ5T751 118 aa3.62□□□□□ -1.83
PPP4R3A-205ENST00000554684 LCE1EQ5T753 118 aa3.62□□□□□ -1.83
PPP4R3A-205ENST00000554684 LCE1FQ5T754 118 aa3.62□□□□□ -1.83
PPP4R3A-205ENST00000554684 KRTAP5-3Q6L8H2 238 aa3.59□□□□□ -1.83
PPP4R3A-205ENST00000554684 KRTAP4-12Q9BQ66 201 aa3.52□□□□□ -1.85
PPP4R3A-205ENST00000554684 KRTAP4-2Q9BYR5 136 aa3.52□□□□□ -1.85
PPP4R3A-205ENST00000554684 AHNAK2Q8IVF2 5795 aa3.52□□□□□ -1.85
PPP4R3A-205ENST00000554684 KRTAP4-4Q9BYR3 166 aa3.42□□□□□ -1.86
PPP4R3A-205ENST00000554684 KRTAP5-8O75690 187 aa3.31□□□□□ -1.88
PPP4R3A-205ENST00000554684 KRTAP5-2Q701N4 177 aa3.28□□□□□ -1.88
PPP4R3A-205ENST00000554684 MUC5BQ9HC84 5762 aaPredicted RBP3.22□□□□□ -1.89
PPP4R3A-205ENST00000554684 AHNAKQ09666 5890 aaKnown RBP3□□□□□ -1.93
PPP4R3A-205ENST00000554684 KRTAP5-1Q6L8H4 278 aa2.99□□□□□ -1.93
PPP4R3A-205ENST00000554684 KRTAP5-10Q6L8G5 202 aa2.93□□□□□ -1.94
PPP4R3A-205ENST00000554684 KRTAP21-2Q3LI59 83 aa2.69□□□□□ -1.98
PPP4R3A-205ENST00000554684 KRTAP5-11Q6L8G4 156 aa2.63□□□□□ -1.99
PPP4R3A-205ENST00000554684 KRTAP5-7Q6L8G8 165 aa2.61□□□□□ -1.99
PPP4R3A-205ENST00000554684 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.53□□□□□ -2
PPP4R3A-205ENST00000554684 PHGR1C9JFL3 82 aa2.51□□□□□ -2.01
PPP4R3A-205ENST00000554684 KRTAP21-1Q3LI58 79 aa2.21□□□□□ -2.06
PPP4R3A-205ENST00000554684 MUC16Q8WXI7 14507 aa1.61□□□□□ -2.15
Retrieved 77 of 20,778 RNA–protein pairs in 11.3 ms