RNA–Protein interactions for RNA: ENST00000552564.5

ITGA5-211, Transcript of integrin subunit alpha 5, humanhuman

TSL 2

Gene ITGA5, Length 4,996 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA5-211ENST00000552564 MT3P25713 68 aa4.37□□□□□ -1.71
ITGA5-211ENST00000552564 MT1MQ8N339 61 aa4.35□□□□□ -1.71
ITGA5-211ENST00000552564 HMCN2Q8NDA2 5059 aa4.33□□□□□ -1.72
ITGA5-211ENST00000552564 KRTAP4-7Q9BYR0 210 aa4.33□□□□□ -1.72
ITGA5-211ENST00000552564 PRM1P04553 51 aa4.25□□□□□ -1.73
ITGA5-211ENST00000552564 LCE2DQ5TA82 110 aaPredicted RBP4.24□□□□□ -1.73
ITGA5-211ENST00000552564 KRTAP19-7Q3SYF9 63 aa4.22□□□□□ -1.73
ITGA5-211ENST00000552564 KRTAP2-3P0C7H8 128 aa4.19□□□□□ -1.74
ITGA5-211ENST00000552564 KRTAP2-4Q9BYR9 128 aa4.19□□□□□ -1.74
ITGA5-211ENST00000552564 KRTAP2-1Q9BYU5 128 aa4.19□□□□□ -1.74
ITGA5-211ENST00000552564 UBR4Q5T4S7 5183 aa4.18□□□□□ -1.74
ITGA5-211ENST00000552564 KRTAP9-2Q9BYQ4 174 aa4.16□□□□□ -1.74
ITGA5-211ENST00000552564 MT1AP04731 61 aa4.16□□□□□ -1.74
ITGA5-211ENST00000552564 LOC100996750A0A140TA64 210 aa4.06□□□□□ -1.76
ITGA5-211ENST00000552564 KRTAP4-3Q9BYR4 195 aa4.06□□□□□ -1.76
ITGA5-211ENST00000552564 SYNE1Q8NF91 8797 aaKnown RBP4.06□□□□□ -1.76
ITGA5-211ENST00000552564 KRTAP9-6A0A140TA67 174 aa4.03□□□□□ -1.76
ITGA5-211ENST00000552564 MUC2Q02817 5179 aa3.99□□□□□ -1.77
ITGA5-211ENST00000552564 MT4P47944 62 aa3.94□□□□□ -1.78
ITGA5-211ENST00000552564 LCE1BQ5T7P3 118 aa3.93□□□□□ -1.78
ITGA5-211ENST00000552564 LCE1DQ5T752 114 aa3.93□□□□□ -1.78
ITGA5-211ENST00000552564 FSIP2Q5CZC0 6907 aa3.92□□□□□ -1.78
ITGA5-211ENST00000552564 LCE1AQ5T7P2 110 aa3.91□□□□□ -1.78
ITGA5-211ENST00000552564 KRTAP9-6A8MVA2 160 aa3.86□□□□□ -1.79
ITGA5-211ENST00000552564 LCE5AQ5TCM9 118 aa3.84□□□□□ -1.79
ITGA5-211ENST00000552564 KRTAP4-9Q9BYQ8 210 aa3.79□□□□□ -1.8
ITGA5-211ENST00000552564 KRTAP6-3Q3LI67 103 aa3.78□□□□□ -1.81
ITGA5-211ENST00000552564 KRTAP9-4Q9BYQ2 154 aa3.77□□□□□ -1.81
ITGA5-211ENST00000552564 KRTAP9-7A8MTY7 169 aa3.75□□□□□ -1.81
ITGA5-211ENST00000552564 KRTAP6-2Q3LI66 62 aa3.75□□□□□ -1.81
ITGA5-211ENST00000552564 KRTAP6-1Q3LI64 71 aa3.74□□□□□ -1.81
ITGA5-211ENST00000552564 USH2AO75445 5202 aa3.72□□□□□ -1.81
ITGA5-211ENST00000552564 LCE4AQ5TA78 99 aa3.68□□□□□ -1.82
ITGA5-211ENST00000552564 OBSCNQ5VST9 7968 aa3.68□□□□□ -1.82
ITGA5-211ENST00000552564 KRTAP20-1Q3LI63 56 aa3.64□□□□□ -1.83
ITGA5-211ENST00000552564 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.63□□□□□ -1.83
ITGA5-211ENST00000552564 SYNE2Q8WXH0 6885 aaKnown RBP3.62□□□□□ -1.83
ITGA5-211ENST00000552564 KRTAP5-9P26371 169 aa3.46□□□□□ -1.86
ITGA5-211ENST00000552564 KRTAP2-2Q9BYT5 123 aa3.44□□□□□ -1.86
ITGA5-211ENST00000552564 KMT2DO14686 5537 aa3.44□□□□□ -1.86
ITGA5-211ENST00000552564 FCGBPQ9Y6R7 5405 aaPredicted RBP3.38□□□□□ -1.87
ITGA5-211ENST00000552564 SSPOA2VEC9 5147 aa3.37□□□□□ -1.87
ITGA5-211ENST00000552564 MACF1Q9UPN3 7388 aaKnown RBP3.34□□□□□ -1.88
ITGA5-211ENST00000552564 LCE1CQ5T751 118 aa3.31□□□□□ -1.88
ITGA5-211ENST00000552564 LCE1EQ5T753 118 aa3.31□□□□□ -1.88
ITGA5-211ENST00000552564 LCE1FQ5T754 118 aa3.31□□□□□ -1.88
ITGA5-211ENST00000552564 DSTQ03001 7570 aaKnown RBP3.26□□□□□ -1.89
ITGA5-211ENST00000552564 MUC12Q9UKN1 5478 aa3.23□□□□□ -1.89
ITGA5-211ENST00000552564 NEBP20929 6669 aa3.16□□□□□ -1.9
ITGA5-211ENST00000552564 KRTAP20-2Q3LI61 65 aa3.09□□□□□ -1.92
ITGA5-211ENST00000552564 KRTAP9-9Q9BYP9 154 aa3.08□□□□□ -1.92
ITGA5-211ENST00000552564 KRTAP4-6Q9BYQ5 205 aa3.06□□□□□ -1.92
ITGA5-211ENST00000552564 KRTAP4-11Q9BYQ6 195 aa3.05□□□□□ -1.92
ITGA5-211ENST00000552564 KRTAP5-5Q701N2 237 aaPredicted RBP3.02□□□□□ -1.93
ITGA5-211ENST00000552564 MDN1Q9NU22 5596 aa2.99□□□□□ -1.93
ITGA5-211ENST00000552564 GPR98Q8WXG9 6306 aa2.98□□□□□ -1.93
ITGA5-211ENST00000552564 MUC19Q7Z5P9 8384 aa2.95□□□□□ -1.94
ITGA5-211ENST00000552564 KRTAP5-4Q6L8H1 288 aa2.94□□□□□ -1.94
ITGA5-211ENST00000552564 KRTAP4-4Q9BYR3 166 aa2.63□□□□□ -1.99
ITGA5-211ENST00000552564 KRTAP5-3Q6L8H2 238 aa2.55□□□□□ -2
ITGA5-211ENST00000552564 KRTAP4-12Q9BQ66 201 aa2.54□□□□□ -2
ITGA5-211ENST00000552564 KRTAP4-2Q9BYR5 136 aa2.54□□□□□ -2
ITGA5-211ENST00000552564 KRTAP5-2Q701N4 177 aa2.51□□□□□ -2.01
ITGA5-211ENST00000552564 MUC5ACP98088 5654 aa2.45□□□□□ -2.02
ITGA5-211ENST00000552564 AHNAK2Q8IVF2 5795 aa2.37□□□□□ -2.03
ITGA5-211ENST00000552564 HMCN1Q96RW7 5635 aa2.37□□□□□ -2.03
ITGA5-211ENST00000552564 KRTAP5-10Q6L8G5 202 aa2.34□□□□□ -2.03
ITGA5-211ENST00000552564 KRTAP5-8O75690 187 aa2.28□□□□□ -2.05
ITGA5-211ENST00000552564 KRTAP5-1Q6L8H4 278 aa2.15□□□□□ -2.07
ITGA5-211ENST00000552564 KRTAP5-11Q6L8G4 156 aa2.14□□□□□ -2.07
ITGA5-211ENST00000552564 MUC5BQ9HC84 5762 aaPredicted RBP2.1□□□□□ -2.07
ITGA5-211ENST00000552564 KRTAP21-2Q3LI59 83 aa2.05□□□□□ -2.08
ITGA5-211ENST00000552564 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.04□□□□□ -2.08
ITGA5-211ENST00000552564 AHNAKQ09666 5890 aaKnown RBP1.98□□□□□ -2.09
ITGA5-211ENST00000552564 KRTAP21-1Q3LI58 79 aa1.92□□□□□ -2.1
ITGA5-211ENST00000552564 PHGR1C9JFL3 82 aa1.91□□□□□ -2.1
ITGA5-211ENST00000552564 KRTAP5-7Q6L8G8 165 aa1.87□□□□□ -2.11
ITGA5-211ENST00000552564 MUC16Q8WXI7 14507 aa1.18□□□□□ -2.22
Retrieved 78 of 20,778 RNA–protein pairs in 9.5 ms