RNA–Protein interactions for RNA: ENST00000551261.5

LETMD1-229, Transcript of LETM1 domain containing 1, humanhuman

TSL 5

Gene LETMD1, Length 521 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-229ENST00000551261 KRTAP5-9P26371 169 aa5.15□□□□□ -1.59
LETMD1-229ENST00000551261 KRTAP4-12Q9BQ66 201 aa5.14□□□□□ -1.59
LETMD1-229ENST00000551261 SPRR2FQ96RM1 72 aa5.12□□□□□ -1.59
LETMD1-229ENST00000551261 KRTAP6-3Q3LI67 103 aa5.09□□□□□ -1.59
LETMD1-229ENST00000551261 KRTAP9-9Q9BYP9 154 aa5.09□□□□□ -1.59
LETMD1-229ENST00000551261 KRTAP9-4Q9BYQ2 154 aa5.09□□□□□ -1.59
LETMD1-229ENST00000551261 MT1LQ93083 61 aa5.07□□□□□ -1.6
LETMD1-229ENST00000551261 KRTAP19-3Q7Z4W3 81 aa5.03□□□□□ -1.6
LETMD1-229ENST00000551261 NEBP20929 6669 aa5.03□□□□□ -1.6
LETMD1-229ENST00000551261 MT1GP13640 62 aa5□□□□□ -1.61
LETMD1-229ENST00000551261 LCE3CQ5T5A8 94 aa4.99□□□□□ -1.61
LETMD1-229ENST00000551261 SPRR5A0A1B0GTR4 108 aa4.98□□□□□ -1.61
LETMD1-229ENST00000551261 KRTAP20-1Q3LI63 56 aa4.98□□□□□ -1.61
LETMD1-229ENST00000551261 MUC12Q9UKN1 5478 aa4.97□□□□□ -1.61
LETMD1-229ENST00000551261 LCE5AQ5TCM9 118 aa4.94□□□□□ -1.62
LETMD1-229ENST00000551261 LCE1AQ5T7P2 110 aa4.91□□□□□ -1.62
LETMD1-229ENST00000551261 MT1MQ8N339 61 aa4.89□□□□□ -1.63
LETMD1-229ENST00000551261 MDN1Q9NU22 5596 aa4.88□□□□□ -1.63
LETMD1-229ENST00000551261 SPRR2EP22531 72 aa4.88□□□□□ -1.63
LETMD1-229ENST00000551261 SPRR2BP35325 72 aa4.88□□□□□ -1.63
LETMD1-229ENST00000551261 SPRR2AP35326 72 aa4.88□□□□□ -1.63
LETMD1-229ENST00000551261 KRTAP4-7Q9BYR0 210 aa4.88□□□□□ -1.63
LETMD1-229ENST00000551261 LCE1DQ5T752 114 aa4.87□□□□□ -1.63
LETMD1-229ENST00000551261 LUZP6Q538Z0 58 aa4.84□□□□□ -1.63
LETMD1-229ENST00000551261 KRTAP4-9Q9BYQ8 210 aa4.74□□□□□ -1.65
LETMD1-229ENST00000551261 SPRR2DP22532 72 aa4.72□□□□□ -1.65
LETMD1-229ENST00000551261 GPR98Q8WXG9 6306 aa4.69□□□□□ -1.66
LETMD1-229ENST00000551261 KRTAP4-2Q9BYR5 136 aa4.66□□□□□ -1.66
LETMD1-229ENST00000551261 KRTAP4-3Q9BYR4 195 aa4.64□□□□□ -1.67
LETMD1-229ENST00000551261 KRTAP9-6A8MVA2 160 aa4.61□□□□□ -1.67
LETMD1-229ENST00000551261 KRTAP2-3P0C7H8 128 aa4.6□□□□□ -1.67
LETMD1-229ENST00000551261 KRTAP2-4Q9BYR9 128 aa4.6□□□□□ -1.67
LETMD1-229ENST00000551261 DSTQ03001 7570 aaKnown RBP4.56□□□□□ -1.68
LETMD1-229ENST00000551261 NDUFAF8A1L188 74 aa4.54□□□□□ -1.68
LETMD1-229ENST00000551261 KRTAP4-11Q9BYQ6 195 aa4.54□□□□□ -1.68
LETMD1-229ENST00000551261 LCE4AQ5TA78 99 aa4.51□□□□□ -1.69
LETMD1-229ENST00000551261 KRTAP5-5Q701N2 237 aaPredicted RBP4.43□□□□□ -1.7
LETMD1-229ENST00000551261 KRTAP2-2Q9BYT5 123 aa4.41□□□□□ -1.7
LETMD1-229ENST00000551261 KRTAP2-1Q9BYU5 128 aa4.41□□□□□ -1.7
LETMD1-229ENST00000551261 MT1AP04731 61 aa4.36□□□□□ -1.71
LETMD1-229ENST00000551261 KRTAP5-4Q6L8H1 288 aa4.28□□□□□ -1.72
LETMD1-229ENST00000551261 KRTAP5-3Q6L8H2 238 aa4.27□□□□□ -1.73
LETMD1-229ENST00000551261 KRTAP6-1Q3LI64 71 aa4.22□□□□□ -1.73
LETMD1-229ENST00000551261 KRTAP12-4P60329 112 aa4.18□□□□□ -1.74
LETMD1-229ENST00000551261 SYNE1Q8NF91 8797 aaKnown RBP4.13□□□□□ -1.75
LETMD1-229ENST00000551261 A0A0A0MQY5 61 aa4.12□□□□□ -1.75
LETMD1-229ENST00000551261 MT4P47944 62 aa4.02□□□□□ -1.77
LETMD1-229ENST00000551261 AHNAK2Q8IVF2 5795 aa4.01□□□□□ -1.77
LETMD1-229ENST00000551261 HMCN1Q96RW7 5635 aa3.99□□□□□ -1.77
LETMD1-229ENST00000551261 H3BS24 57 aa3.98□□□□□ -1.77
LETMD1-229ENST00000551261 MT3P25713 68 aa3.97□□□□□ -1.77
LETMD1-229ENST00000551261 KRTAP20-2Q3LI61 65 aa3.97□□□□□ -1.77
LETMD1-229ENST00000551261 KRTAP5-10Q6L8G5 202 aa3.94□□□□□ -1.78
LETMD1-229ENST00000551261 KRTAP6-2Q3LI66 62 aa3.91□□□□□ -1.78
LETMD1-229ENST00000551261 INE1O15225 51 aa3.9□□□□□ -1.79
LETMD1-229ENST00000551261 KRTAP5-7Q6L8G8 165 aa3.89□□□□□ -1.79
LETMD1-229ENST00000551261 KRTAP5-2Q701N4 177 aa3.88□□□□□ -1.79
LETMD1-229ENST00000551261 LCE3DQ9BYE3 92 aa3.75□□□□□ -1.81
LETMD1-229ENST00000551261 LCE3EQ5T5B0 92 aa3.65□□□□□ -1.83
LETMD1-229ENST00000551261 AHNAKQ09666 5890 aaKnown RBP3.61□□□□□ -1.83
LETMD1-229ENST00000551261 OBSCNQ5VST9 7968 aa3.56□□□□□ -1.84
LETMD1-229ENST00000551261 LCE1EQ5T753 118 aa3.51□□□□□ -1.85
LETMD1-229ENST00000551261 MUC5ACP98088 5654 aa3.47□□□□□ -1.85
LETMD1-229ENST00000551261 MUC5BQ9HC84 5762 aaPredicted RBP3.42□□□□□ -1.86
LETMD1-229ENST00000551261 KRTAP5-8O75690 187 aa3.32□□□□□ -1.88
LETMD1-229ENST00000551261 KRTAP5-1Q6L8H4 278 aa3.32□□□□□ -1.88
LETMD1-229ENST00000551261 LCE1CQ5T751 118 aa3.24□□□□□ -1.89
LETMD1-229ENST00000551261 LCE1BQ5T7P3 118 aa3.24□□□□□ -1.89
LETMD1-229ENST00000551261 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.14□□□□□ -1.91
LETMD1-229ENST00000551261 PRM1P04553 51 aa3.09□□□□□ -1.91
LETMD1-229ENST00000551261 KRTAP5-11Q6L8G4 156 aa3.04□□□□□ -1.92
LETMD1-229ENST00000551261 KRTAP21-2Q3LI59 83 aa2.79□□□□□ -1.96
LETMD1-229ENST00000551261 LCE1FQ5T754 118 aa2.67□□□□□ -1.98
LETMD1-229ENST00000551261 KRTAP4-4Q9BYR3 166 aa2.62□□□□□ -1.99
LETMD1-229ENST00000551261 PHGR1C9JFL3 82 aa2.44□□□□□ -2.02
LETMD1-229ENST00000551261 MUC19Q7Z5P9 8384 aa2.07□□□□□ -2.08
LETMD1-229ENST00000551261 KRTAP21-1Q3LI58 79 aa1.92□□□□□ -2.1
LETMD1-229ENST00000551261 MUC16Q8WXI7 14507 aa1.52□□□□□ -2.17
Retrieved 78 of 20,778 RNA–protein pairs in 12 ms