RNA–Protein interactions for RNA: ENST00000551165.5

SSH1-209, Transcript of slingshot protein phosphatase 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SSH1, Length 2,354 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-209ENST00000551165 KRTAP4-7Q9BYR0 210 aa6.95□□□□□ -1.3
SSH1-209ENST00000551165 SPRR2FQ96RM1 72 aa6.89□□□□□ -1.31
SSH1-209ENST00000551165 KRTAP9-6A0A140TA67 174 aa6.79□□□□□ -1.32
SSH1-209ENST00000551165 KRTAP19-3Q7Z4W3 81 aa6.78□□□□□ -1.32
SSH1-209ENST00000551165 KRTAP9-6A8MVA2 160 aa6.72□□□□□ -1.33
SSH1-209ENST00000551165 KRTAP4-3Q9BYR4 195 aa6.72□□□□□ -1.33
SSH1-209ENST00000551165 MDN1Q9NU22 5596 aa6.71□□□□□ -1.34
SSH1-209ENST00000551165 KRTAP5-9P26371 169 aa6.71□□□□□ -1.34
SSH1-209ENST00000551165 MT1GP13640 62 aa6.69□□□□□ -1.34
SSH1-209ENST00000551165 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.68□□□□□ -1.34
SSH1-209ENST00000551165 KRTAP19-4Q3LI73 84 aa6.68□□□□□ -1.34
SSH1-209ENST00000551165 MT1MQ8N339 61 aa6.68□□□□□ -1.34
SSH1-209ENST00000551165 LCE5AQ5TCM9 118 aa6.66□□□□□ -1.34
SSH1-209ENST00000551165 LCE1AQ5T7P2 110 aa6.57□□□□□ -1.36
SSH1-209ENST00000551165 DSTQ03001 7570 aaKnown RBP6.52□□□□□ -1.37
SSH1-209ENST00000551165 LOC100996750A0A140TA64 210 aa6.51□□□□□ -1.37
SSH1-209ENST00000551165 KRTAP6-3Q3LI67 103 aa6.5□□□□□ -1.37
SSH1-209ENST00000551165 SPRR2EP22531 72 aa6.49□□□□□ -1.37
SSH1-209ENST00000551165 SPRR2BP35325 72 aa6.49□□□□□ -1.37
SSH1-209ENST00000551165 SPRR2AP35326 72 aa6.49□□□□□ -1.37
SSH1-209ENST00000551165 INE1O15225 51 aa6.46□□□□□ -1.38
SSH1-209ENST00000551165 KRTAP9-7A8MTY7 169 aa6.25□□□□□ -1.41
SSH1-209ENST00000551165 SPRR2DP22532 72 aa6.22□□□□□ -1.41
SSH1-209ENST00000551165 KRTAP2-3P0C7H8 128 aa6.14□□□□□ -1.43
SSH1-209ENST00000551165 KRTAP2-4Q9BYR9 128 aa6.14□□□□□ -1.43
SSH1-209ENST00000551165 KRTAP2-1Q9BYU5 128 aa6.14□□□□□ -1.43
SSH1-209ENST00000551165 NEBP20929 6669 aa6.11□□□□□ -1.43
SSH1-209ENST00000551165 KRTAP5-5Q701N2 237 aaPredicted RBP6.01□□□□□ -1.45
SSH1-209ENST00000551165 LCE3BQ5TA77 95 aa5.98□□□□□ -1.45
SSH1-209ENST00000551165 KRTAP6-1Q3LI64 71 aa5.94□□□□□ -1.46
SSH1-209ENST00000551165 MT1AP04731 61 aa5.88□□□□□ -1.47
SSH1-209ENST00000551165 SYNE1Q8NF91 8797 aaKnown RBP5.8□□□□□ -1.48
SSH1-209ENST00000551165 KRTAP5-4Q6L8H1 288 aa5.64□□□□□ -1.51
SSH1-209ENST00000551165 KRTAP9-4Q9BYQ2 154 aa5.6□□□□□ -1.51
SSH1-209ENST00000551165 KRTAP4-9Q9BYQ8 210 aa5.6□□□□□ -1.51
SSH1-209ENST00000551165 KRTAP2-2Q9BYT5 123 aa5.55□□□□□ -1.52
SSH1-209ENST00000551165 KRTAP20-1Q3LI63 56 aa5.52□□□□□ -1.53
SSH1-209ENST00000551165 MT4P47944 62 aa5.49□□□□□ -1.53
SSH1-209ENST00000551165 KRTAP4-6Q9BYQ5 205 aa5.49□□□□□ -1.53
SSH1-209ENST00000551165 KRTAP12-4P60329 112 aa5.48□□□□□ -1.53
SSH1-209ENST00000551165 KRTAP6-2Q3LI66 62 aa5.44□□□□□ -1.54
SSH1-209ENST00000551165 LCE4AQ5TA78 99 aa5.43□□□□□ -1.54
SSH1-209ENST00000551165 LCE1DQ5T752 114 aa5.34□□□□□ -1.56
SSH1-209ENST00000551165 HMCN1Q96RW7 5635 aa5.33□□□□□ -1.56
SSH1-209ENST00000551165 MT3P25713 68 aa5.3□□□□□ -1.56
SSH1-209ENST00000551165 KRTAP20-2Q3LI61 65 aa5.3□□□□□ -1.56
SSH1-209ENST00000551165 LCE3DQ9BYE3 92 aa5.23□□□□□ -1.57
SSH1-209ENST00000551165 OBSCNQ5VST9 7968 aa5.21□□□□□ -1.58
SSH1-209ENST00000551165 KRTAP5-2Q701N4 177 aa5.14□□□□□ -1.59
SSH1-209ENST00000551165 KRTAP5-3Q6L8H2 238 aa5.1□□□□□ -1.59
SSH1-209ENST00000551165 LCE3EQ5T5B0 92 aa5.09□□□□□ -1.59
SSH1-209ENST00000551165 AHNAK2Q8IVF2 5795 aa4.59□□□□□ -1.67
SSH1-209ENST00000551165 PRM1P04553 51 aa4.57□□□□□ -1.68
SSH1-209ENST00000551165 KRTAP4-11Q9BYQ6 195 aa4.56□□□□□ -1.68
SSH1-209ENST00000551165 LCE1EQ5T753 118 aa4.53□□□□□ -1.68
SSH1-209ENST00000551165 KRTAP5-1Q6L8H4 278 aa4.47□□□□□ -1.69
SSH1-209ENST00000551165 MUC5ACP98088 5654 aa4.42□□□□□ -1.7
SSH1-209ENST00000551165 LCE1BQ5T7P3 118 aa4.41□□□□□ -1.7
SSH1-209ENST00000551165 KRTAP5-8O75690 187 aa4.4□□□□□ -1.71
SSH1-209ENST00000551165 KRTAP5-10Q6L8G5 202 aa4.33□□□□□ -1.72
SSH1-209ENST00000551165 KRTAP4-2Q9BYR5 136 aa4.33□□□□□ -1.72
SSH1-209ENST00000551165 LCE1CQ5T751 118 aa4.26□□□□□ -1.73
SSH1-209ENST00000551165 KRTAP5-7Q6L8G8 165 aa4.2□□□□□ -1.74
SSH1-209ENST00000551165 LCE1FQ5T754 118 aa4.05□□□□□ -1.76
SSH1-209ENST00000551165 GPR98Q8WXG9 6306 aa4.05□□□□□ -1.76
SSH1-209ENST00000551165 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.97□□□□□ -1.77
SSH1-209ENST00000551165 MUC5BQ9HC84 5762 aaPredicted RBP3.89□□□□□ -1.79
SSH1-209ENST00000551165 KRTAP21-2Q3LI59 83 aa3.87□□□□□ -1.79
SSH1-209ENST00000551165 KRTAP9-9Q9BYP9 154 aa3.87□□□□□ -1.79
SSH1-209ENST00000551165 KRTAP5-11Q6L8G4 156 aa3.73□□□□□ -1.81
SSH1-209ENST00000551165 KRTAP4-12Q9BQ66 201 aa3.67□□□□□ -1.82
SSH1-209ENST00000551165 KRTAP4-4Q9BYR3 166 aa3.54□□□□□ -1.84
SSH1-209ENST00000551165 AHNAKQ09666 5890 aaKnown RBP3.35□□□□□ -1.87
SSH1-209ENST00000551165 PHGR1C9JFL3 82 aa3.24□□□□□ -1.89
SSH1-209ENST00000551165 MUC19Q7Z5P9 8384 aa3.07□□□□□ -1.92
SSH1-209ENST00000551165 KRTAP21-1Q3LI58 79 aa2.77□□□□□ -1.97
SSH1-209ENST00000551165 MUC16Q8WXI7 14507 aa2.08□□□□□ -2.08
Retrieved 77 of 20,778 RNA–protein pairs in 65.6 ms