RNA–Protein interactions for RNA: ENST00000550859.5

SMARCC2-211, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

TSL 3

Gene SMARCC2, Length 656 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-211ENST00000550859 SPINK1P00995 79 aa2.16□□□□□ -2.06
SMARCC2-211ENST00000550859 KRTAP4-1Q9BYQ7 146 aa2.16□□□□□ -2.06
SMARCC2-211ENST00000550859 MUC17Q685J3 4493 aa2.15□□□□□ -2.06
SMARCC2-211ENST00000550859 H1FX-AS1Q4G0G2 97 aa2.15□□□□□ -2.07
SMARCC2-211ENST00000550859 SPRR1BP22528 89 aa2.13□□□□□ -2.07
SMARCC2-211ENST00000550859 RPL37P61927 97 aaKnown RBP2.12□□□□□ -2.07
SMARCC2-211ENST00000550859 M0R2T5 61 aa2.08□□□□□ -2.08
SMARCC2-211ENST00000550859 RPS29P62273 56 aaKnown RBP2.07□□□□□ -2.08
SMARCC2-211ENST00000550859 C10orf95Q9H7T3 257 aa2.07□□□□□ -2.08
SMARCC2-211ENST00000550859 MT1HP80294 61 aa2.04□□□□□ -2.08
SMARCC2-211ENST00000550859 FSIP2Q5CZC0 6907 aa2.03□□□□□ -2.08
SMARCC2-211ENST00000550859 KRTAP19-2Q3LHN2 52 aa2.02□□□□□ -2.09
SMARCC2-211ENST00000550859 KRTAP5-7Q6L8G8 165 aa2.02□□□□□ -2.09
SMARCC2-211ENST00000550859 S4R3F8 94 aa1.97□□□□□ -2.09
SMARCC2-211ENST00000550859 KRTAP5-8O75690 187 aa1.96□□□□□ -2.1
SMARCC2-211ENST00000550859 CRCT1Q9UGL9 99 aa1.96□□□□□ -2.1
SMARCC2-211ENST00000550859 USH2AO75445 5202 aa1.94□□□□□ -2.1
SMARCC2-211ENST00000550859 FLGP20930 4061 aaPredicted RBP1.92□□□□□ -2.1
SMARCC2-211ENST00000550859 KRTAP12-3P60328 96 aa1.92□□□□□ -2.1
SMARCC2-211ENST00000550859 MUC19Q7Z5P9 8384 aa1.92□□□□□ -2.1
SMARCC2-211ENST00000550859 SSPOA2VEC9 5147 aa1.91□□□□□ -2.1
SMARCC2-211ENST00000550859 MT2AP02795 61 aa1.9□□□□□ -2.11
SMARCC2-211ENST00000550859 MT1FP04733 61 aa1.9□□□□□ -2.11
SMARCC2-211ENST00000550859 KRTAP12-4P60329 112 aa1.9□□□□□ -2.11
SMARCC2-211ENST00000550859 KRTAP12-1P59990 96 aa1.88□□□□□ -2.11
SMARCC2-211ENST00000550859 KRTAP13-4Q3LI77 160 aa1.87□□□□□ -2.11
SMARCC2-211ENST00000550859 A0A0D9SG42 100 aa1.83□□□□□ -2.12
SMARCC2-211ENST00000550859 M0QZ58 72 aa1.83□□□□□ -2.12
SMARCC2-211ENST00000550859 FCGBPQ9Y6R7 5405 aaPredicted RBP1.83□□□□□ -2.12
SMARCC2-211ENST00000550859 KRTAP6-3Q3LI67 103 aa1.8□□□□□ -2.12
SMARCC2-211ENST00000550859 SYNE2Q8WXH0 6885 aaKnown RBP1.8□□□□□ -2.12
SMARCC2-211ENST00000550859 MACF1Q9UPN3 7388 aaKnown RBP1.77□□□□□ -2.13
SMARCC2-211ENST00000550859 KRTAP19-6Q3LI70 58 aa1.74□□□□□ -2.13
SMARCC2-211ENST00000550859 KRTAP21-2Q3LI59 83 aa1.73□□□□□ -2.13
SMARCC2-211ENST00000550859 MT1BP07438 61 aa1.72□□□□□ -2.13
SMARCC2-211ENST00000550859 MUC12Q9UKN1 5478 aa1.69□□□□□ -2.14
SMARCC2-211ENST00000550859 SPRR2GQ9BYE4 73 aa1.68□□□□□ -2.14
SMARCC2-211ENST00000550859 KMT2DO14686 5537 aa1.68□□□□□ -2.14
SMARCC2-211ENST00000550859 KRTAP19-8Q3LI54 63 aa1.67□□□□□ -2.14
SMARCC2-211ENST00000550859 NEBP20929 6669 aa1.65□□□□□ -2.15
SMARCC2-211ENST00000550859 MT1XP80297 61 aa1.62□□□□□ -2.15
SMARCC2-211ENST00000550859 MDN1Q9NU22 5596 aa1.62□□□□□ -2.15
SMARCC2-211ENST00000550859 SPRR2FQ96RM1 72 aa1.61□□□□□ -2.15
SMARCC2-211ENST00000550859 TNP1P09430 55 aa1.6□□□□□ -2.15
SMARCC2-211ENST00000550859 SPRR2EP22531 72 aa1.59□□□□□ -2.15
SMARCC2-211ENST00000550859 SPRR2BP35325 72 aa1.59□□□□□ -2.15
SMARCC2-211ENST00000550859 SPRR2AP35326 72 aa1.59□□□□□ -2.15
SMARCC2-211ENST00000550859 KRTAP8-1Q8IUC2 63 aa1.59□□□□□ -2.15
SMARCC2-211ENST00000550859 KRTAP20-1Q3LI63 56 aa1.58□□□□□ -2.16
SMARCC2-211ENST00000550859 SPRR2DP22532 72 aa1.53□□□□□ -2.16
SMARCC2-211ENST00000550859 KRTAP2-3P0C7H8 128 aa1.51□□□□□ -2.17
SMARCC2-211ENST00000550859 KRTAP2-4Q9BYR9 128 aa1.51□□□□□ -2.17
SMARCC2-211ENST00000550859 KRTAP2-1Q9BYU5 128 aa1.49□□□□□ -2.17
SMARCC2-211ENST00000550859 KRTAP19-5Q3LI72 72 aa1.45□□□□□ -2.18
SMARCC2-211ENST00000550859 KRTAP19-7Q3SYF9 63 aa1.44□□□□□ -2.18
SMARCC2-211ENST00000550859 MT1EP04732 61 aa1.43□□□□□ -2.18
SMARCC2-211ENST00000550859 HMCN1Q96RW7 5635 aa1.42□□□□□ -2.18
SMARCC2-211ENST00000550859 DSTQ03001 7570 aaKnown RBP1.42□□□□□ -2.18
SMARCC2-211ENST00000550859 KRTAP19-3Q7Z4W3 81 aa1.41□□□□□ -2.18
SMARCC2-211ENST00000550859 MT4P47944 62 aa1.39□□□□□ -2.19
SMARCC2-211ENST00000550859 MT1MQ8N339 61 aa1.37□□□□□ -2.19
SMARCC2-211ENST00000550859 MT1LQ93083 61 aa1.37□□□□□ -2.19
SMARCC2-211ENST00000550859 GPR98Q8WXG9 6306 aa1.37□□□□□ -2.19
SMARCC2-211ENST00000550859 MT1GP13640 62 aa1.35□□□□□ -2.19
SMARCC2-211ENST00000550859 SYNE1Q8NF91 8797 aaKnown RBP1.29□□□□□ -2.2
SMARCC2-211ENST00000550859 AHNAK2Q8IVF2 5795 aa1.27□□□□□ -2.21
SMARCC2-211ENST00000550859 KRTAP20-2Q3LI61 65 aa1.21□□□□□ -2.22
SMARCC2-211ENST00000550859 PRM1P04553 51 aa1.2□□□□□ -2.22
SMARCC2-211ENST00000550859 KRTAP5-10Q6L8G5 202 aa1.2□□□□□ -2.22
SMARCC2-211ENST00000550859 KRTAP6-1Q3LI64 71 aa1.19□□□□□ -2.22
SMARCC2-211ENST00000550859 MT1AP04731 61 aa1.17□□□□□ -2.22
SMARCC2-211ENST00000550859 KRTAP6-2Q3LI66 62 aa1.14□□□□□ -2.23
SMARCC2-211ENST00000550859 AHNAKQ09666 5890 aaKnown RBP1.05□□□□□ -2.24
SMARCC2-211ENST00000550859 MUC5BQ9HC84 5762 aaPredicted RBP1.03□□□□□ -2.25
SMARCC2-211ENST00000550859 MUC5ACP98088 5654 aa1.02□□□□□ -2.25
SMARCC2-211ENST00000550859 KRTAP21-1Q3LI58 79 aa0.92□□□□□ -2.26
SMARCC2-211ENST00000550859 MUC16Q8WXI7 14507 aa0.92□□□□□ -2.26
SMARCC2-211ENST00000550859 PHGR1C9JFL3 82 aa0.75□□□□□ -2.29
Retrieved 78 of 20,778 RNA–protein pairs in 299.7 ms