RNA–Protein interactions for RNA: ENST00000550851.5

LGR5-206, Transcript of leucine rich repeat containing G protein-coupled receptor 5, humanhuman

TSL 2

Gene LGR5, Length 4,095 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LGR5-206ENST00000550851 LCE3BQ5TA77 95 aa3.95□□□□□ -1.78
LGR5-206ENST00000550851 MT1EP04732 61 aa3.92□□□□□ -1.78
LGR5-206ENST00000550851 MT1LQ93083 61 aa3.92□□□□□ -1.78
LGR5-206ENST00000550851 FCGBPQ9Y6R7 5405 aaPredicted RBP3.91□□□□□ -1.78
LGR5-206ENST00000550851 KRTAP9-2Q9BYQ4 174 aa3.9□□□□□ -1.78
LGR5-206ENST00000550851 KRTAP19-6Q3LI70 58 aa3.9□□□□□ -1.79
LGR5-206ENST00000550851 KRTAP19-3Q7Z4W3 81 aa3.9□□□□□ -1.79
LGR5-206ENST00000550851 SPRR2DP22532 72 aa3.88□□□□□ -1.79
LGR5-206ENST00000550851 KMT2DO14686 5537 aa3.84□□□□□ -1.8
LGR5-206ENST00000550851 KRTAP4-3Q9BYR4 195 aa3.84□□□□□ -1.8
LGR5-206ENST00000550851 KRTAP19-7Q3SYF9 63 aa3.82□□□□□ -1.8
LGR5-206ENST00000550851 SYNE2Q8WXH0 6885 aaKnown RBP3.8□□□□□ -1.8
LGR5-206ENST00000550851 LOC100996750A0A140TA64 210 aa3.78□□□□□ -1.8
LGR5-206ENST00000550851 MT1MQ8N339 61 aa3.77□□□□□ -1.81
LGR5-206ENST00000550851 KRTAP12-4P60329 112 aa3.76□□□□□ -1.81
LGR5-206ENST00000550851 LCE2DQ5TA82 110 aaPredicted RBP3.71□□□□□ -1.81
LGR5-206ENST00000550851 MUC12Q9UKN1 5478 aa3.64□□□□□ -1.83
LGR5-206ENST00000550851 LCE3DQ9BYE3 92 aa3.62□□□□□ -1.83
LGR5-206ENST00000550851 SSPOA2VEC9 5147 aa3.59□□□□□ -1.84
LGR5-206ENST00000550851 KRTAP9-6A0A140TA67 174 aa3.57□□□□□ -1.84
LGR5-206ENST00000550851 KRTAP9-6A8MVA2 160 aa3.56□□□□□ -1.84
LGR5-206ENST00000550851 MACF1Q9UPN3 7388 aaKnown RBP3.56□□□□□ -1.84
LGR5-206ENST00000550851 MT4P47944 62 aa3.54□□□□□ -1.84
LGR5-206ENST00000550851 LCE3EQ5T5B0 92 aa3.53□□□□□ -1.84
LGR5-206ENST00000550851 KRTAP4-9Q9BYQ8 210 aa3.48□□□□□ -1.85
LGR5-206ENST00000550851 LCE5AQ5TCM9 118 aa3.43□□□□□ -1.86
LGR5-206ENST00000550851 MT3P25713 68 aa3.42□□□□□ -1.86
LGR5-206ENST00000550851 LCE1AQ5T7P2 110 aa3.41□□□□□ -1.86
LGR5-206ENST00000550851 KRTAP9-7A8MTY7 169 aa3.4□□□□□ -1.86
LGR5-206ENST00000550851 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.39□□□□□ -1.87
LGR5-206ENST00000550851 MT1AP04731 61 aa3.39□□□□□ -1.87
LGR5-206ENST00000550851 KRTAP2-3P0C7H8 128 aa3.38□□□□□ -1.87
LGR5-206ENST00000550851 KRTAP2-4Q9BYR9 128 aa3.38□□□□□ -1.87
LGR5-206ENST00000550851 KRTAP2-1Q9BYU5 128 aa3.38□□□□□ -1.87
LGR5-206ENST00000550851 KRTAP6-1Q3LI64 71 aa3.35□□□□□ -1.87
LGR5-206ENST00000550851 KRTAP6-3Q3LI67 103 aa3.33□□□□□ -1.88
LGR5-206ENST00000550851 MDN1Q9NU22 5596 aa3.31□□□□□ -1.88
LGR5-206ENST00000550851 LCE1DQ5T752 114 aa3.27□□□□□ -1.89
LGR5-206ENST00000550851 PRM1P04553 51 aa3.26□□□□□ -1.89
LGR5-206ENST00000550851 LCE1BQ5T7P3 118 aa3.25□□□□□ -1.89
LGR5-206ENST00000550851 KRTAP6-2Q3LI66 62 aa3.23□□□□□ -1.89
LGR5-206ENST00000550851 KRTAP20-1Q3LI63 56 aa3.17□□□□□ -1.9
LGR5-206ENST00000550851 KRTAP9-4Q9BYQ2 154 aa3.14□□□□□ -1.91
LGR5-206ENST00000550851 KRTAP5-9P26371 169 aa3.09□□□□□ -1.92
LGR5-206ENST00000550851 KRTAP2-2Q9BYT5 123 aa3.08□□□□□ -1.92
LGR5-206ENST00000550851 NEBP20929 6669 aa3.08□□□□□ -1.92
LGR5-206ENST00000550851 LCE4AQ5TA78 99 aa3.02□□□□□ -1.93
LGR5-206ENST00000550851 MUC19Q7Z5P9 8384 aa3□□□□□ -1.93
LGR5-206ENST00000550851 KRTAP4-6Q9BYQ5 205 aa2.93□□□□□ -1.94
LGR5-206ENST00000550851 GPR98Q8WXG9 6306 aa2.79□□□□□ -1.96
LGR5-206ENST00000550851 KRTAP20-2Q3LI61 65 aa2.78□□□□□ -1.97
LGR5-206ENST00000550851 MUC5ACP98088 5654 aa2.7□□□□□ -1.98
LGR5-206ENST00000550851 KRTAP5-5Q701N2 237 aaPredicted RBP2.67□□□□□ -1.98
LGR5-206ENST00000550851 LCE1CQ5T751 118 aa2.6□□□□□ -1.99
LGR5-206ENST00000550851 LCE1EQ5T753 118 aa2.6□□□□□ -1.99
LGR5-206ENST00000550851 LCE1FQ5T754 118 aa2.6□□□□□ -1.99
LGR5-206ENST00000550851 HMCN1Q96RW7 5635 aa2.59□□□□□ -1.99
LGR5-206ENST00000550851 KRTAP9-9Q9BYP9 154 aa2.52□□□□□ -2.01
LGR5-206ENST00000550851 KRTAP5-4Q6L8H1 288 aa2.51□□□□□ -2.01
LGR5-206ENST00000550851 KRTAP4-11Q9BYQ6 195 aa2.49□□□□□ -2.01
LGR5-206ENST00000550851 KRTAP4-4Q9BYR3 166 aa2.42□□□□□ -2.02
LGR5-206ENST00000550851 KRTAP4-12Q9BQ66 201 aa2.42□□□□□ -2.02
LGR5-206ENST00000550851 KRTAP4-2Q9BYR5 136 aa2.42□□□□□ -2.02
LGR5-206ENST00000550851 AHNAK2Q8IVF2 5795 aa2.39□□□□□ -2.03
LGR5-206ENST00000550851 KRTAP5-3Q6L8H2 238 aa2.33□□□□□ -2.04
LGR5-206ENST00000550851 KRTAP5-2Q701N4 177 aa2.2□□□□□ -2.06
LGR5-206ENST00000550851 KRTAP5-8O75690 187 aa2.17□□□□□ -2.06
LGR5-206ENST00000550851 MUC5BQ9HC84 5762 aaPredicted RBP2.06□□□□□ -2.08
LGR5-206ENST00000550851 KRTAP5-10Q6L8G5 202 aa2.05□□□□□ -2.08
LGR5-206ENST00000550851 AHNAKQ09666 5890 aaKnown RBP2.01□□□□□ -2.09
LGR5-206ENST00000550851 KRTAP5-1Q6L8H4 278 aa1.98□□□□□ -2.09
LGR5-206ENST00000550851 KRTAP21-2Q3LI59 83 aa1.85□□□□□ -2.11
LGR5-206ENST00000550851 KRTAP5-11Q6L8G4 156 aa1.83□□□□□ -2.12
LGR5-206ENST00000550851 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.68□□□□□ -2.14
LGR5-206ENST00000550851 PHGR1C9JFL3 82 aa1.67□□□□□ -2.14
LGR5-206ENST00000550851 KRTAP5-7Q6L8G8 165 aa1.57□□□□□ -2.16
LGR5-206ENST00000550851 KRTAP21-1Q3LI58 79 aa1.45□□□□□ -2.18
LGR5-206ENST00000550851 MUC16Q8WXI7 14507 aa1.11□□□□□ -2.23
Retrieved 78 of 20,778 RNA–protein pairs in 81.7 ms