RNA–Protein interactions for RNA: ENST00000550346.5

TROAP-212, Transcript of trophinin associated protein, humanhuman

APPRIS ALT2 TSL 3

Gene TROAP, Length 640 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-212ENST00000550346 SPRR2EP22531 72 aa4.9□□□□□ -1.63
TROAP-212ENST00000550346 SPRR2BP35325 72 aa4.9□□□□□ -1.63
TROAP-212ENST00000550346 SPRR2AP35326 72 aa4.9□□□□□ -1.63
TROAP-212ENST00000550346 KRTAP2-3P0C7H8 128 aa4.86□□□□□ -1.63
TROAP-212ENST00000550346 KRTAP2-4Q9BYR9 128 aa4.86□□□□□ -1.63
TROAP-212ENST00000550346 KRTAP19-5Q3LI72 72 aa4.85□□□□□ -1.63
TROAP-212ENST00000550346 KRTAP19-7Q3SYF9 63 aa4.83□□□□□ -1.64
TROAP-212ENST00000550346 LCE1AQ5T7P2 110 aa4.83□□□□□ -1.64
TROAP-212ENST00000550346 MT1EP04732 61 aa4.79□□□□□ -1.64
TROAP-212ENST00000550346 PP632Q6XCG6 107 aa4.75□□□□□ -1.65
TROAP-212ENST00000550346 SPRR2DP22532 72 aa4.74□□□□□ -1.65
TROAP-212ENST00000550346 KRTAP12-3P60328 96 aa4.74□□□□□ -1.65
TROAP-212ENST00000550346 NDUFAF8A1L188 74 aa4.73□□□□□ -1.65
TROAP-212ENST00000550346 KRTAP19-4Q3LI73 84 aa4.72□□□□□ -1.65
TROAP-212ENST00000550346 KRTAP19-3Q7Z4W3 81 aa4.71□□□□□ -1.66
TROAP-212ENST00000550346 KRTAP15-1Q3LI76 137 aa4.7□□□□□ -1.66
TROAP-212ENST00000550346 MT1GP13640 62 aa4.68□□□□□ -1.66
TROAP-212ENST00000550346 KRTAP2-2Q9BYT5 123 aa4.68□□□□□ -1.66
TROAP-212ENST00000550346 KRTAP2-1Q9BYU5 128 aa4.68□□□□□ -1.66
TROAP-212ENST00000550346 LCE5AQ5TCM9 118 aa4.65□□□□□ -1.67
TROAP-212ENST00000550346 MT1LQ93083 61 aa4.64□□□□□ -1.67
TROAP-212ENST00000550346 LCE3BQ5TA77 95 aa4.57□□□□□ -1.68
TROAP-212ENST00000550346 MT1MQ8N339 61 aa4.55□□□□□ -1.68
TROAP-212ENST00000550346 KRTAP4-7Q9BYR0 210 aa4.47□□□□□ -1.69
TROAP-212ENST00000550346 KRTAP4-3Q9BYR4 195 aa4.43□□□□□ -1.7
TROAP-212ENST00000550346 GPR98Q8WXG9 6306 aa4.41□□□□□ -1.7
TROAP-212ENST00000550346 LCE3CQ5T5A8 94 aa4.41□□□□□ -1.7
TROAP-212ENST00000550346 DSTQ03001 7570 aaKnown RBP4.4□□□□□ -1.7
TROAP-212ENST00000550346 KRTAP4-9Q9BYQ8 210 aa4.24□□□□□ -1.73
TROAP-212ENST00000550346 LOC100996750A0A140TA64 210 aa4.21□□□□□ -1.74
TROAP-212ENST00000550346 LCE4AQ5TA78 99 aa4.21□□□□□ -1.74
TROAP-212ENST00000550346 KRTAP9-6A8MVA2 160 aa4.18□□□□□ -1.74
TROAP-212ENST00000550346 KRTAP9-4Q9BYQ2 154 aa4.16□□□□□ -1.74
TROAP-212ENST00000550346 SPRR5A0A1B0GTR4 108 aa4.12□□□□□ -1.75
TROAP-212ENST00000550346 LCE1DQ5T752 114 aa4.12□□□□□ -1.75
TROAP-212ENST00000550346 KRTAP5-4Q6L8H1 288 aa4.12□□□□□ -1.75
TROAP-212ENST00000550346 MT4P47944 62 aa4.11□□□□□ -1.75
TROAP-212ENST00000550346 KRTAP5-5Q701N2 237 aaPredicted RBP4.09□□□□□ -1.75
TROAP-212ENST00000550346 HMCN1Q96RW7 5635 aa4.06□□□□□ -1.76
TROAP-212ENST00000550346 AHNAK2Q8IVF2 5795 aa4.05□□□□□ -1.76
TROAP-212ENST00000550346 KRTAP12-4P60329 112 aa4.05□□□□□ -1.76
TROAP-212ENST00000550346 KRTAP4-6Q9BYQ5 205 aa3.99□□□□□ -1.77
TROAP-212ENST00000550346 MT1AP04731 61 aa3.96□□□□□ -1.78
TROAP-212ENST00000550346 KRTAP5-10Q6L8G5 202 aa3.96□□□□□ -1.78
TROAP-212ENST00000550346 KRTAP9-9Q9BYP9 154 aa3.96□□□□□ -1.78
TROAP-212ENST00000550346 KRTAP6-1Q3LI64 71 aa3.91□□□□□ -1.78
TROAP-212ENST00000550346 KRTAP20-2Q3LI61 65 aa3.89□□□□□ -1.79
TROAP-212ENST00000550346 KRTAP5-7Q6L8G8 165 aa3.86□□□□□ -1.79
TROAP-212ENST00000550346 SYNE1Q8NF91 8797 aaKnown RBP3.84□□□□□ -1.8
TROAP-212ENST00000550346 KRTAP5-3Q6L8H2 238 aa3.81□□□□□ -1.8
TROAP-212ENST00000550346 MT3P25713 68 aa3.8□□□□□ -1.8
TROAP-212ENST00000550346 KRTAP6-2Q3LI66 62 aa3.7□□□□□ -1.82
TROAP-212ENST00000550346 INE1O15225 51 aa3.65□□□□□ -1.83
TROAP-212ENST00000550346 KRTAP5-2Q701N4 177 aa3.65□□□□□ -1.83
TROAP-212ENST00000550346 LCE1FQ5T754 118 aa3.62□□□□□ -1.83
TROAP-212ENST00000550346 KRTAP4-12Q9BQ66 201 aa3.5□□□□□ -1.85
TROAP-212ENST00000550346 KRTAP4-11Q9BYQ6 195 aa3.5□□□□□ -1.85
TROAP-212ENST00000550346 AHNAKQ09666 5890 aaKnown RBP3.39□□□□□ -1.87
TROAP-212ENST00000550346 MUC5ACP98088 5654 aa3.36□□□□□ -1.87
TROAP-212ENST00000550346 MUC5BQ9HC84 5762 aaPredicted RBP3.34□□□□□ -1.87
TROAP-212ENST00000550346 KRTAP5-8O75690 187 aa3.34□□□□□ -1.87
TROAP-212ENST00000550346 OBSCNQ5VST9 7968 aa3.32□□□□□ -1.88
TROAP-212ENST00000550346 LCE3DQ9BYE3 92 aa3.27□□□□□ -1.89
TROAP-212ENST00000550346 LCE1EQ5T753 118 aa3.26□□□□□ -1.89
TROAP-212ENST00000550346 KRTAP5-1Q6L8H4 278 aa3.22□□□□□ -1.89
TROAP-212ENST00000550346 LCE3EQ5T5B0 92 aa3.15□□□□□ -1.91
TROAP-212ENST00000550346 LCE1BQ5T7P3 118 aa3.07□□□□□ -1.92
TROAP-212ENST00000550346 LCE1CQ5T751 118 aa3.01□□□□□ -1.93
TROAP-212ENST00000550346 KRTAP4-2Q9BYR5 136 aa2.98□□□□□ -1.93
TROAP-212ENST00000550346 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.75□□□□□ -1.97
TROAP-212ENST00000550346 KRTAP5-11Q6L8G4 156 aa2.67□□□□□ -1.98
TROAP-212ENST00000550346 PRM1P04553 51 aa2.62□□□□□ -1.99
TROAP-212ENST00000550346 KRTAP21-2Q3LI59 83 aa2.56□□□□□ -2
TROAP-212ENST00000550346 PHGR1C9JFL3 82 aa2.33□□□□□ -2.04
TROAP-212ENST00000550346 KRTAP4-4Q9BYR3 166 aa2.33□□□□□ -2.04
TROAP-212ENST00000550346 MUC19Q7Z5P9 8384 aa2.02□□□□□ -2.09
TROAP-212ENST00000550346 KRTAP21-1Q3LI58 79 aa1.79□□□□□ -2.12
TROAP-212ENST00000550346 MUC16Q8WXI7 14507 aa1.46□□□□□ -2.18
Retrieved 78 of 20,778 RNA–protein pairs in 86.8 ms