RNA–Protein interactions for RNA: ENST00000550224.5

PRIM1-205, Transcript of DNA primase subunit 1, humanhuman

TSL 5

Gene PRIM1, Length 1,206 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRIM1-205ENST00000550224 CAMK2N1Q7Z7J9 78 aa3.09□□□□□ -1.91
PRIM1-205ENST00000550224 SPRR2GQ9BYE4 73 aa3.09□□□□□ -1.91
PRIM1-205ENST00000550224 MT2AP02795 61 aa3.08□□□□□ -1.92
PRIM1-205ENST00000550224 ROMO1P60602 79 aa3.07□□□□□ -1.92
PRIM1-205ENST00000550224 FLGP20930 4061 aaPredicted RBP3.06□□□□□ -1.92
PRIM1-205ENST00000550224 KTN1-AS1Q86SY8 53 aa3.06□□□□□ -1.92
PRIM1-205ENST00000550224 KRTAP12-2P59991 146 aa3.05□□□□□ -1.92
PRIM1-205ENST00000550224 LCE3EQ5T5B0 92 aa3.05□□□□□ -1.92
PRIM1-205ENST00000550224 MT1FP04733 61 aa3.04□□□□□ -1.92
PRIM1-205ENST00000550224 KRTAP19-8Q3LI54 63 aa2.99□□□□□ -1.93
PRIM1-205ENST00000550224 PRO2289Q9P1D8 64 aa2.98□□□□□ -1.93
PRIM1-205ENST00000550224 KRTAP25-1Q3LHN0 102 aa2.97□□□□□ -1.93
PRIM1-205ENST00000550224 TNP1P09430 55 aa2.95□□□□□ -1.94
PRIM1-205ENST00000550224 PP632Q6XCG6 107 aa2.92□□□□□ -1.94
PRIM1-205ENST00000550224 C10orf95Q9H7T3 257 aa2.9□□□□□ -1.95
PRIM1-205ENST00000550224 MT1BP07438 61 aa2.88□□□□□ -1.95
PRIM1-205ENST00000550224 MT1XP80297 61 aa2.8□□□□□ -1.96
PRIM1-205ENST00000550224 KRTAP5-8O75690 187 aa2.77□□□□□ -1.97
PRIM1-205ENST00000550224 FSIP2Q5CZC0 6907 aa2.77□□□□□ -1.97
PRIM1-205ENST00000550224 KRTAP19-6Q3LI70 58 aa2.75□□□□□ -1.97
PRIM1-205ENST00000550224 KRTAP5-5Q701N2 237 aaPredicted RBP2.75□□□□□ -1.97
PRIM1-205ENST00000550224 USH2AO75445 5202 aa2.72□□□□□ -1.97
PRIM1-205ENST00000550224 LCE1CQ5T751 118 aa2.7□□□□□ -1.98
PRIM1-205ENST00000550224 LCE1BQ5T7P3 118 aa2.7□□□□□ -1.98
PRIM1-205ENST00000550224 CRCT1Q9UGL9 99 aa2.69□□□□□ -1.98
PRIM1-205ENST00000550224 SSPOA2VEC9 5147 aa2.68□□□□□ -1.98
PRIM1-205ENST00000550224 KRTAP8-1Q8IUC2 63 aa2.68□□□□□ -1.98
PRIM1-205ENST00000550224 KRTAP12-3P60328 96 aa2.63□□□□□ -1.99
PRIM1-205ENST00000550224 FCGBPQ9Y6R7 5405 aaPredicted RBP2.61□□□□□ -1.99
PRIM1-205ENST00000550224 LUZP6Q538Z0 58 aa2.57□□□□□ -2
PRIM1-205ENST00000550224 KRTAP19-5Q3LI72 72 aa2.55□□□□□ -2
PRIM1-205ENST00000550224 MACF1Q9UPN3 7388 aaKnown RBP2.52□□□□□ -2.01
PRIM1-205ENST00000550224 KRTAP19-7Q3SYF9 63 aa2.49□□□□□ -2.01
PRIM1-205ENST00000550224 SYNE2Q8WXH0 6885 aaKnown RBP2.47□□□□□ -2.01
PRIM1-205ENST00000550224 MT1EP04732 61 aa2.46□□□□□ -2.02
PRIM1-205ENST00000550224 SPRR5A0A1B0GTR4 108 aa2.45□□□□□ -2.02
PRIM1-205ENST00000550224 SPRR2FQ96RM1 72 aa2.45□□□□□ -2.02
PRIM1-205ENST00000550224 LCE3DQ9BYE3 92 aa2.45□□□□□ -2.02
PRIM1-205ENST00000550224 MT1GP13640 62 aa2.44□□□□□ -2.02
PRIM1-205ENST00000550224 MT1LQ93083 61 aa2.43□□□□□ -2.02
PRIM1-205ENST00000550224 KRTAP19-3Q7Z4W3 81 aa2.41□□□□□ -2.02
PRIM1-205ENST00000550224 KRTAP6-3Q3LI67 103 aa2.4□□□□□ -2.03
PRIM1-205ENST00000550224 MDN1Q9NU22 5596 aa2.36□□□□□ -2.03
PRIM1-205ENST00000550224 MUC12Q9UKN1 5478 aa2.36□□□□□ -2.03
PRIM1-205ENST00000550224 NEBP20929 6669 aa2.35□□□□□ -2.03
PRIM1-205ENST00000550224 KMT2DO14686 5537 aa2.34□□□□□ -2.03
PRIM1-205ENST00000550224 SPRR2EP22531 72 aa2.33□□□□□ -2.04
PRIM1-205ENST00000550224 SPRR2BP35325 72 aa2.33□□□□□ -2.04
PRIM1-205ENST00000550224 SPRR2AP35326 72 aa2.33□□□□□ -2.04
PRIM1-205ENST00000550224 MT1MQ8N339 61 aa2.33□□□□□ -2.04
PRIM1-205ENST00000550224 MUC19Q7Z5P9 8384 aa2.32□□□□□ -2.04
PRIM1-205ENST00000550224 SPRR2DP22532 72 aa2.25□□□□□ -2.05
PRIM1-205ENST00000550224 KRTAP5-7Q6L8G8 165 aa2.17□□□□□ -2.06
PRIM1-205ENST00000550224 KRTAP20-1Q3LI63 56 aa2.15□□□□□ -2.07
PRIM1-205ENST00000550224 KRTAP2-3P0C7H8 128 aa2.14□□□□□ -2.07
PRIM1-205ENST00000550224 KRTAP2-4Q9BYR9 128 aa2.14□□□□□ -2.07
PRIM1-205ENST00000550224 KRTAP2-1Q9BYU5 128 aa2.12□□□□□ -2.07
PRIM1-205ENST00000550224 MT1AP04731 61 aa2.09□□□□□ -2.07
PRIM1-205ENST00000550224 INE1O15225 51 aa2.07□□□□□ -2.08
PRIM1-205ENST00000550224 KRTAP12-4P60329 112 aa2.07□□□□□ -2.08
PRIM1-205ENST00000550224 KRTAP6-1Q3LI64 71 aa2.01□□□□□ -2.09
PRIM1-205ENST00000550224 DSTQ03001 7570 aaKnown RBP2.01□□□□□ -2.09
PRIM1-205ENST00000550224 KRTAP21-2Q3LI59 83 aa1.96□□□□□ -2.1
PRIM1-205ENST00000550224 HMCN1Q96RW7 5635 aa1.93□□□□□ -2.1
PRIM1-205ENST00000550224 MT4P47944 62 aa1.91□□□□□ -2.1
PRIM1-205ENST00000550224 KRTAP6-2Q3LI66 62 aa1.88□□□□□ -2.11
PRIM1-205ENST00000550224 GPR98Q8WXG9 6306 aa1.88□□□□□ -2.11
PRIM1-205ENST00000550224 KRTAP20-2Q3LI61 65 aa1.87□□□□□ -2.11
PRIM1-205ENST00000550224 AHNAK2Q8IVF2 5795 aa1.83□□□□□ -2.12
PRIM1-205ENST00000550224 SYNE1Q8NF91 8797 aaKnown RBP1.75□□□□□ -2.13
PRIM1-205ENST00000550224 KRTAP5-10Q6L8G5 202 aa1.71□□□□□ -2.14
PRIM1-205ENST00000550224 PRM1P04553 51 aa1.54□□□□□ -2.16
PRIM1-205ENST00000550224 MUC5BQ9HC84 5762 aaPredicted RBP1.51□□□□□ -2.17
PRIM1-205ENST00000550224 AHNAKQ09666 5890 aaKnown RBP1.5□□□□□ -2.17
PRIM1-205ENST00000550224 MUC5ACP98088 5654 aa1.49□□□□□ -2.17
PRIM1-205ENST00000550224 PHGR1C9JFL3 82 aa1.15□□□□□ -2.23
PRIM1-205ENST00000550224 KRTAP21-1Q3LI58 79 aa0.95□□□□□ -2.26
PRIM1-205ENST00000550224 MUC16Q8WXI7 14507 aa0.88□□□□□ -2.27
Retrieved 78 of 20,778 RNA–protein pairs in 81.4 ms