RNA–Protein interactions for RNA: ENST00000550164.5

SMARCC2-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMARCC2, Length 4,114 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-209ENST00000550164 LOC100996750A0A140TA64 210 aa3.3□□□□□ -1.88
SMARCC2-209ENST00000550164 KRTAP4-3Q9BYR4 195 aa3.29□□□□□ -1.88
SMARCC2-209ENST00000550164 KMT2DO14686 5537 aa3.28□□□□□ -1.88
SMARCC2-209ENST00000550164 USH2AO75445 5202 aa3.26□□□□□ -1.89
SMARCC2-209ENST00000550164 KRTAP2-3P0C7H8 128 aa3.25□□□□□ -1.89
SMARCC2-209ENST00000550164 KRTAP2-4Q9BYR9 128 aa3.25□□□□□ -1.89
SMARCC2-209ENST00000550164 KRTAP2-1Q9BYU5 128 aa3.25□□□□□ -1.89
SMARCC2-209ENST00000550164 OBSCNQ5VST9 7968 aa3.25□□□□□ -1.89
SMARCC2-209ENST00000550164 KRTAP9-2Q9BYQ4 174 aa3.25□□□□□ -1.89
SMARCC2-209ENST00000550164 KRTAP19-3Q7Z4W3 81 aa3.25□□□□□ -1.89
SMARCC2-209ENST00000550164 MT1MQ8N339 61 aa3.2□□□□□ -1.9
SMARCC2-209ENST00000550164 DSTQ03001 7570 aaKnown RBP3.19□□□□□ -1.9
SMARCC2-209ENST00000550164 LCE3DQ9BYE3 92 aa3.19□□□□□ -1.9
SMARCC2-209ENST00000550164 FCGBPQ9Y6R7 5405 aaPredicted RBP3.19□□□□□ -1.9
SMARCC2-209ENST00000550164 LCE3EQ5T5B0 92 aa3.14□□□□□ -1.91
SMARCC2-209ENST00000550164 KRTAP9-6A0A140TA67 174 aa3.14□□□□□ -1.91
SMARCC2-209ENST00000550164 KRTAP19-6Q3LI70 58 aa3.11□□□□□ -1.91
SMARCC2-209ENST00000550164 SPRR2EP22531 72 aa3.09□□□□□ -1.91
SMARCC2-209ENST00000550164 SPRR2BP35325 72 aa3.09□□□□□ -1.91
SMARCC2-209ENST00000550164 SPRR2AP35326 72 aa3.09□□□□□ -1.91
SMARCC2-209ENST00000550164 KRTAP4-9Q9BYQ8 210 aa3.09□□□□□ -1.91
SMARCC2-209ENST00000550164 PRM1P04553 51 aa3.03□□□□□ -1.92
SMARCC2-209ENST00000550164 SYNE2Q8WXH0 6885 aaKnown RBP3.03□□□□□ -1.92
SMARCC2-209ENST00000550164 MUC12Q9UKN1 5478 aa2.97□□□□□ -1.93
SMARCC2-209ENST00000550164 SSPOA2VEC9 5147 aa2.97□□□□□ -1.93
SMARCC2-209ENST00000550164 SPRR2DP22532 72 aa2.96□□□□□ -1.94
SMARCC2-209ENST00000550164 MT1AP04731 61 aa2.91□□□□□ -1.94
SMARCC2-209ENST00000550164 KRTAP6-1Q3LI64 71 aa2.91□□□□□ -1.94
SMARCC2-209ENST00000550164 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.88□□□□□ -1.95
SMARCC2-209ENST00000550164 LCE5AQ5TCM9 118 aa2.88□□□□□ -1.95
SMARCC2-209ENST00000550164 MT3P25713 68 aa2.85□□□□□ -1.95
SMARCC2-209ENST00000550164 KRTAP9-7A8MTY7 169 aa2.84□□□□□ -1.96
SMARCC2-209ENST00000550164 KRTAP6-2Q3LI66 62 aa2.77□□□□□ -1.97
SMARCC2-209ENST00000550164 MACF1Q9UPN3 7388 aaKnown RBP2.75□□□□□ -1.97
SMARCC2-209ENST00000550164 LCE4AQ5TA78 99 aa2.73□□□□□ -1.97
SMARCC2-209ENST00000550164 KRTAP6-3Q3LI67 103 aa2.71□□□□□ -1.97
SMARCC2-209ENST00000550164 LCE1AQ5T7P2 110 aa2.71□□□□□ -1.98
SMARCC2-209ENST00000550164 MT4P47944 62 aa2.7□□□□□ -1.98
SMARCC2-209ENST00000550164 KRTAP9-4Q9BYQ2 154 aa2.69□□□□□ -1.98
SMARCC2-209ENST00000550164 KRTAP5-9P26371 169 aa2.66□□□□□ -1.98
SMARCC2-209ENST00000550164 LCE1DQ5T752 114 aa2.62□□□□□ -1.99
SMARCC2-209ENST00000550164 LCE1BQ5T7P3 118 aa2.6□□□□□ -1.99
SMARCC2-209ENST00000550164 KRTAP20-1Q3LI63 56 aa2.58□□□□□ -2
SMARCC2-209ENST00000550164 NEBP20929 6669 aa2.56□□□□□ -2
SMARCC2-209ENST00000550164 GPR98Q8WXG9 6306 aa2.54□□□□□ -2
SMARCC2-209ENST00000550164 KRTAP9-9Q9BYP9 154 aa2.53□□□□□ -2.01
SMARCC2-209ENST00000550164 KRTAP5-5Q701N2 237 aaPredicted RBP2.52□□□□□ -2.01
SMARCC2-209ENST00000550164 KRTAP2-2Q9BYT5 123 aa2.51□□□□□ -2.01
SMARCC2-209ENST00000550164 MDN1Q9NU22 5596 aa2.5□□□□□ -2.01
SMARCC2-209ENST00000550164 MUC19Q7Z5P9 8384 aa2.49□□□□□ -2.01
SMARCC2-209ENST00000550164 LCE1EQ5T753 118 aa2.48□□□□□ -2.01
SMARCC2-209ENST00000550164 LCE1FQ5T754 118 aa2.46□□□□□ -2.02
SMARCC2-209ENST00000550164 KRTAP4-6Q9BYQ5 205 aa2.32□□□□□ -2.04
SMARCC2-209ENST00000550164 KRTAP4-11Q9BYQ6 195 aa2.28□□□□□ -2.04
SMARCC2-209ENST00000550164 KRTAP4-12Q9BQ66 201 aa2.27□□□□□ -2.05
SMARCC2-209ENST00000550164 KRTAP20-2Q3LI61 65 aa2.22□□□□□ -2.05
SMARCC2-209ENST00000550164 KRTAP5-4Q6L8H1 288 aa2.2□□□□□ -2.06
SMARCC2-209ENST00000550164 MUC5ACP98088 5654 aa2.09□□□□□ -2.08
SMARCC2-209ENST00000550164 HMCN1Q96RW7 5635 aa2.06□□□□□ -2.08
SMARCC2-209ENST00000550164 KRTAP5-10Q6L8G5 202 aa2.03□□□□□ -2.08
SMARCC2-209ENST00000550164 KRTAP4-4Q9BYR3 166 aa2.01□□□□□ -2.09
SMARCC2-209ENST00000550164 KRTAP5-2Q701N4 177 aa2□□□□□ -2.09
SMARCC2-209ENST00000550164 AHNAK2Q8IVF2 5795 aa2□□□□□ -2.09
SMARCC2-209ENST00000550164 LCE1CQ5T751 118 aa1.97□□□□□ -2.09
SMARCC2-209ENST00000550164 KRTAP5-7Q6L8G8 165 aa1.97□□□□□ -2.09
SMARCC2-209ENST00000550164 KRTAP5-3Q6L8H2 238 aa1.97□□□□□ -2.09
SMARCC2-209ENST00000550164 KRTAP4-2Q9BYR5 136 aa1.88□□□□□ -2.11
SMARCC2-209ENST00000550164 KRTAP5-8O75690 187 aa1.76□□□□□ -2.13
SMARCC2-209ENST00000550164 KRTAP5-1Q6L8H4 278 aa1.69□□□□□ -2.14
SMARCC2-209ENST00000550164 KRTAP21-2Q3LI59 83 aa1.65□□□□□ -2.14
SMARCC2-209ENST00000550164 AHNAKQ09666 5890 aaKnown RBP1.62□□□□□ -2.15
SMARCC2-209ENST00000550164 MUC5BQ9HC84 5762 aaPredicted RBP1.6□□□□□ -2.15
SMARCC2-209ENST00000550164 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.6□□□□□ -2.15
SMARCC2-209ENST00000550164 KRTAP21-1Q3LI58 79 aa1.54□□□□□ -2.16
SMARCC2-209ENST00000550164 KRTAP5-11Q6L8G4 156 aa1.53□□□□□ -2.16
SMARCC2-209ENST00000550164 PHGR1C9JFL3 82 aa1.31□□□□□ -2.2
SMARCC2-209ENST00000550164 MUC16Q8WXI7 14507 aa0.85□□□□□ -2.27
Retrieved 77 of 20,778 RNA–protein pairs in 30.5 ms