RNA–Protein interactions for RNA: ENST00000549686.5

LETMD1-220, Transcript of LETM1 domain containing 1, humanhuman

TSL 2

Gene LETMD1, Length 563 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-220ENST00000549686 KRTAP19-4Q3LI73 84 aa6.23□□□□□ -1.41
LETMD1-220ENST00000549686 MT1LQ93083 61 aa6.21□□□□□ -1.42
LETMD1-220ENST00000549686 KRTAP19-3Q7Z4W3 81 aa6.2□□□□□ -1.42
LETMD1-220ENST00000549686 LCE1AQ5T7P2 110 aa6.18□□□□□ -1.42
LETMD1-220ENST00000549686 SPRR2EP22531 72 aa6.17□□□□□ -1.42
LETMD1-220ENST00000549686 SPRR2BP35325 72 aa6.17□□□□□ -1.42
LETMD1-220ENST00000549686 SPRR2AP35326 72 aa6.17□□□□□ -1.42
LETMD1-220ENST00000549686 MDN1Q9NU22 5596 aa6.16□□□□□ -1.42
LETMD1-220ENST00000549686 MT1GP13640 62 aa6.15□□□□□ -1.42
LETMD1-220ENST00000549686 LCE5AQ5TCM9 118 aa6.11□□□□□ -1.43
LETMD1-220ENST00000549686 NEBP20929 6669 aa6.07□□□□□ -1.44
LETMD1-220ENST00000549686 MT1MQ8N339 61 aa6.02□□□□□ -1.45
LETMD1-220ENST00000549686 LCE3CQ5T5A8 94 aa6.01□□□□□ -1.45
LETMD1-220ENST00000549686 SPRR2DP22532 72 aa5.96□□□□□ -1.46
LETMD1-220ENST00000549686 KRTAP4-7Q9BYR0 210 aa5.88□□□□□ -1.47
LETMD1-220ENST00000549686 KRTAP4-3Q9BYR4 195 aa5.8□□□□□ -1.48
LETMD1-220ENST00000549686 SPRR5A0A1B0GTR4 108 aa5.76□□□□□ -1.49
LETMD1-220ENST00000549686 LCE3BQ5TA77 95 aa5.74□□□□□ -1.49
LETMD1-220ENST00000549686 KRTAP2-3P0C7H8 128 aa5.73□□□□□ -1.49
LETMD1-220ENST00000549686 KRTAP2-4Q9BYR9 128 aa5.73□□□□□ -1.49
LETMD1-220ENST00000549686 KRTAP20-1Q3LI63 56 aa5.68□□□□□ -1.5
LETMD1-220ENST00000549686 DSTQ03001 7570 aaKnown RBP5.64□□□□□ -1.51
LETMD1-220ENST00000549686 KRTAP9-6A8MVA2 160 aa5.59□□□□□ -1.51
LETMD1-220ENST00000549686 KRTAP2-2Q9BYT5 123 aa5.59□□□□□ -1.51
LETMD1-220ENST00000549686 KRTAP2-1Q9BYU5 128 aa5.59□□□□□ -1.51
LETMD1-220ENST00000549686 LOC100996750A0A140TA64 210 aa5.54□□□□□ -1.52
LETMD1-220ENST00000549686 LUZP6Q538Z0 58 aa5.5□□□□□ -1.53
LETMD1-220ENST00000549686 KRTAP5-5Q701N2 237 aaPredicted RBP5.46□□□□□ -1.54
LETMD1-220ENST00000549686 LCE4AQ5TA78 99 aa5.35□□□□□ -1.55
LETMD1-220ENST00000549686 KRTAP5-4Q6L8H1 288 aa5.35□□□□□ -1.55
LETMD1-220ENST00000549686 MT1AP04731 61 aa5.31□□□□□ -1.56
LETMD1-220ENST00000549686 KRTAP6-1Q3LI64 71 aa5.2□□□□□ -1.58
LETMD1-220ENST00000549686 KRTAP12-4P60329 112 aa5.19□□□□□ -1.58
LETMD1-220ENST00000549686 MT4P47944 62 aa5.13□□□□□ -1.59
LETMD1-220ENST00000549686 SYNE1Q8NF91 8797 aaKnown RBP5.11□□□□□ -1.59
LETMD1-220ENST00000549686 KRTAP4-9Q9BYQ8 210 aa5.11□□□□□ -1.59
LETMD1-220ENST00000549686 LCE1DQ5T752 114 aa5.1□□□□□ -1.59
LETMD1-220ENST00000549686 NDUFAF8A1L188 74 aa5.08□□□□□ -1.6
LETMD1-220ENST00000549686 KRTAP9-4Q9BYQ2 154 aa5.06□□□□□ -1.6
LETMD1-220ENST00000549686 KRTAP4-6Q9BYQ5 205 aa5.05□□□□□ -1.6
LETMD1-220ENST00000549686 HMCN1Q96RW7 5635 aa5.04□□□□□ -1.6
LETMD1-220ENST00000549686 KRTAP20-2Q3LI61 65 aa4.99□□□□□ -1.61
LETMD1-220ENST00000549686 MT3P25713 68 aa4.85□□□□□ -1.63
LETMD1-220ENST00000549686 KRTAP6-2Q3LI66 62 aa4.85□□□□□ -1.63
LETMD1-220ENST00000549686 KRTAP5-3Q6L8H2 238 aa4.82□□□□□ -1.64
LETMD1-220ENST00000549686 KRTAP5-2Q701N4 177 aa4.81□□□□□ -1.64
LETMD1-220ENST00000549686 AHNAK2Q8IVF2 5795 aa4.61□□□□□ -1.67
LETMD1-220ENST00000549686 GPR98Q8WXG9 6306 aa4.55□□□□□ -1.68
LETMD1-220ENST00000549686 A0A0A0MQY5 61 aa4.49□□□□□ -1.69
LETMD1-220ENST00000549686 LCE3DQ9BYE3 92 aa4.48□□□□□ -1.69
LETMD1-220ENST00000549686 KRTAP5-10Q6L8G5 202 aa4.39□□□□□ -1.71
LETMD1-220ENST00000549686 KRTAP4-11Q9BYQ6 195 aa4.39□□□□□ -1.71
LETMD1-220ENST00000549686 LCE3EQ5T5B0 92 aa4.34□□□□□ -1.71
LETMD1-220ENST00000549686 OBSCNQ5VST9 7968 aa4.33□□□□□ -1.72
LETMD1-220ENST00000549686 LCE1EQ5T753 118 aa4.3□□□□□ -1.72
LETMD1-220ENST00000549686 INE1O15225 51 aa4.29□□□□□ -1.72
LETMD1-220ENST00000549686 KRTAP5-8O75690 187 aa4.22□□□□□ -1.73
LETMD1-220ENST00000549686 KRTAP5-7Q6L8G8 165 aa4.18□□□□□ -1.74
LETMD1-220ENST00000549686 KRTAP5-1Q6L8H4 278 aa4.17□□□□□ -1.74
LETMD1-220ENST00000549686 MUC5ACP98088 5654 aa4.06□□□□□ -1.76
LETMD1-220ENST00000549686 LCE1CQ5T751 118 aa3.98□□□□□ -1.77
LETMD1-220ENST00000549686 LCE1BQ5T7P3 118 aa3.98□□□□□ -1.77
LETMD1-220ENST00000549686 H3BS24 57 aa3.97□□□□□ -1.77
LETMD1-220ENST00000549686 KRTAP4-2Q9BYR5 136 aa3.94□□□□□ -1.78
LETMD1-220ENST00000549686 KRTAP9-9Q9BYP9 154 aa3.91□□□□□ -1.78
LETMD1-220ENST00000549686 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.71□□□□□ -1.82
LETMD1-220ENST00000549686 MUC5BQ9HC84 5762 aaPredicted RBP3.7□□□□□ -1.82
LETMD1-220ENST00000549686 AHNAKQ09666 5890 aaKnown RBP3.67□□□□□ -1.82
LETMD1-220ENST00000549686 PRM1P04553 51 aa3.62□□□□□ -1.83
LETMD1-220ENST00000549686 KRTAP5-11Q6L8G4 156 aa3.54□□□□□ -1.84
LETMD1-220ENST00000549686 KRTAP21-2Q3LI59 83 aa3.43□□□□□ -1.86
LETMD1-220ENST00000549686 LCE1FQ5T754 118 aa3.3□□□□□ -1.88
LETMD1-220ENST00000549686 KRTAP4-12Q9BQ66 201 aa3.29□□□□□ -1.88
LETMD1-220ENST00000549686 PHGR1C9JFL3 82 aa3.02□□□□□ -1.93
LETMD1-220ENST00000549686 KRTAP4-4Q9BYR3 166 aa2.99□□□□□ -1.93
LETMD1-220ENST00000549686 MUC19Q7Z5P9 8384 aa2.58□□□□□ -2
LETMD1-220ENST00000549686 KRTAP21-1Q3LI58 79 aa2.19□□□□□ -2.06
LETMD1-220ENST00000549686 MUC16Q8WXI7 14507 aa1.94□□□□□ -2.1
Retrieved 78 of 20,778 RNA–protein pairs in 111.3 ms