RNA–Protein interactions for RNA: ENST00000549613.1

CALCOCO1-214, Transcript of calcium binding and coiled-coil domain 1, humanhuman

TSL 2

Gene CALCOCO1, Length 884 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO1-214ENST00000549613 KRTAP4-8A0A0G2JLE6 195 aa5.21□□□□□ -1.58
CALCOCO1-214ENST00000549613 KRTAP4-8Q9BYQ9 185 aa5.21□□□□□ -1.58
CALCOCO1-214ENST00000549613 KRTAP12-3P60328 96 aa5.15□□□□□ -1.59
CALCOCO1-214ENST00000549613 KRTAP19-5Q3LI72 72 aa5.12□□□□□ -1.59
CALCOCO1-214ENST00000549613 KRTAP15-1Q3LI76 137 aa5.05□□□□□ -1.6
CALCOCO1-214ENST00000549613 KRTAP19-7Q3SYF9 63 aa5.05□□□□□ -1.6
CALCOCO1-214ENST00000549613 SPRR2EP22531 72 aa5.03□□□□□ -1.6
CALCOCO1-214ENST00000549613 SPRR2BP35325 72 aa5.03□□□□□ -1.6
CALCOCO1-214ENST00000549613 SPRR2AP35326 72 aa5.03□□□□□ -1.6
CALCOCO1-214ENST00000549613 MT1EP04732 61 aa4.97□□□□□ -1.61
CALCOCO1-214ENST00000549613 KRTAP19-4Q3LI73 84 aa4.95□□□□□ -1.62
CALCOCO1-214ENST00000549613 SPRR2FQ96RM1 72 aa4.92□□□□□ -1.62
CALCOCO1-214ENST00000549613 SPRR2DP22532 72 aa4.87□□□□□ -1.63
CALCOCO1-214ENST00000549613 MT1LQ93083 61 aa4.87□□□□□ -1.63
CALCOCO1-214ENST00000549613 LCE1AQ5T7P2 110 aa4.84□□□□□ -1.63
CALCOCO1-214ENST00000549613 LCE3CQ5T5A8 94 aa4.81□□□□□ -1.64
CALCOCO1-214ENST00000549613 LCE3BQ5TA77 95 aa4.81□□□□□ -1.64
CALCOCO1-214ENST00000549613 KRTAP19-3Q7Z4W3 81 aa4.81□□□□□ -1.64
CALCOCO1-214ENST00000549613 MT1GP13640 62 aa4.8□□□□□ -1.64
CALCOCO1-214ENST00000549613 SPRR5A0A1B0GTR4 108 aa4.75□□□□□ -1.65
CALCOCO1-214ENST00000549613 LCE5AQ5TCM9 118 aa4.71□□□□□ -1.66
CALCOCO1-214ENST00000549613 KRTAP4-9Q9BYQ8 210 aa4.71□□□□□ -1.66
CALCOCO1-214ENST00000549613 DSTQ03001 7570 aaKnown RBP4.7□□□□□ -1.66
CALCOCO1-214ENST00000549613 MT1MQ8N339 61 aa4.7□□□□□ -1.66
CALCOCO1-214ENST00000549613 KRTAP4-7Q9BYR0 210 aa4.66□□□□□ -1.66
CALCOCO1-214ENST00000549613 LUZP6Q538Z0 58 aa4.65□□□□□ -1.67
CALCOCO1-214ENST00000549613 KRTAP5-10Q6L8G5 202 aa4.55□□□□□ -1.68
CALCOCO1-214ENST00000549613 KRTAP4-3Q9BYR4 195 aa4.54□□□□□ -1.68
CALCOCO1-214ENST00000549613 AHNAK2Q8IVF2 5795 aa4.53□□□□□ -1.68
CALCOCO1-214ENST00000549613 HMCN1Q96RW7 5635 aa4.51□□□□□ -1.69
CALCOCO1-214ENST00000549613 KRTAP5-7Q6L8G8 165 aa4.49□□□□□ -1.69
CALCOCO1-214ENST00000549613 LCE1DQ5T752 114 aa4.48□□□□□ -1.69
CALCOCO1-214ENST00000549613 KRTAP9-6A8MVA2 160 aa4.47□□□□□ -1.69
CALCOCO1-214ENST00000549613 NDUFAF8A1L188 74 aa4.42□□□□□ -1.7
CALCOCO1-214ENST00000549613 LOC100996750A0A140TA64 210 aa4.37□□□□□ -1.71
CALCOCO1-214ENST00000549613 MT4P47944 62 aa4.34□□□□□ -1.71
CALCOCO1-214ENST00000549613 KRTAP5-3Q6L8H2 238 aa4.27□□□□□ -1.73
CALCOCO1-214ENST00000549613 LCE4AQ5TA78 99 aa4.24□□□□□ -1.73
CALCOCO1-214ENST00000549613 KRTAP5-5Q701N2 237 aaPredicted RBP4.22□□□□□ -1.73
CALCOCO1-214ENST00000549613 MT1AP04731 61 aa4.17□□□□□ -1.74
CALCOCO1-214ENST00000549613 KRTAP4-6Q9BYQ5 205 aa4.13□□□□□ -1.75
CALCOCO1-214ENST00000549613 KRTAP6-1Q3LI64 71 aa4.09□□□□□ -1.75
CALCOCO1-214ENST00000549613 KRTAP5-4Q6L8H1 288 aa4.07□□□□□ -1.76
CALCOCO1-214ENST00000549613 KRTAP12-4P60329 112 aa4□□□□□ -1.77
CALCOCO1-214ENST00000549613 AHNAKQ09666 5890 aaKnown RBP3.99□□□□□ -1.77
CALCOCO1-214ENST00000549613 KRTAP9-4Q9BYQ2 154 aa3.97□□□□□ -1.77
CALCOCO1-214ENST00000549613 A0A0A0MQY5 61 aa3.96□□□□□ -1.78
CALCOCO1-214ENST00000549613 SYNE1Q8NF91 8797 aaKnown RBP3.92□□□□□ -1.78
CALCOCO1-214ENST00000549613 MUC5ACP98088 5654 aa3.87□□□□□ -1.79
CALCOCO1-214ENST00000549613 KRTAP20-2Q3LI61 65 aa3.85□□□□□ -1.79
CALCOCO1-214ENST00000549613 MUC5BQ9HC84 5762 aaPredicted RBP3.82□□□□□ -1.8
CALCOCO1-214ENST00000549613 MT3P25713 68 aa3.81□□□□□ -1.8
CALCOCO1-214ENST00000549613 KRTAP6-2Q3LI66 62 aa3.78□□□□□ -1.8
CALCOCO1-214ENST00000549613 H3BS24 57 aa3.76□□□□□ -1.81
CALCOCO1-214ENST00000549613 INE1O15225 51 aa3.72□□□□□ -1.81
CALCOCO1-214ENST00000549613 KRTAP4-11Q9BYQ6 195 aa3.72□□□□□ -1.81
CALCOCO1-214ENST00000549613 KRTAP5-8O75690 187 aa3.69□□□□□ -1.82
CALCOCO1-214ENST00000549613 KRTAP5-2Q701N4 177 aa3.68□□□□□ -1.82
CALCOCO1-214ENST00000549613 LCE3DQ9BYE3 92 aa3.62□□□□□ -1.83
CALCOCO1-214ENST00000549613 KRTAP9-9Q9BYP9 154 aa3.58□□□□□ -1.84
CALCOCO1-214ENST00000549613 LCE3EQ5T5B0 92 aa3.53□□□□□ -1.84
CALCOCO1-214ENST00000549613 OBSCNQ5VST9 7968 aa3.37□□□□□ -1.87
CALCOCO1-214ENST00000549613 LCE1EQ5T753 118 aa3.32□□□□□ -1.88
CALCOCO1-214ENST00000549613 KRTAP4-12Q9BQ66 201 aa3.21□□□□□ -1.9
CALCOCO1-214ENST00000549613 KRTAP5-1Q6L8H4 278 aa3.18□□□□□ -1.9
CALCOCO1-214ENST00000549613 LCE1BQ5T7P3 118 aa3.08□□□□□ -1.92
CALCOCO1-214ENST00000549613 LCE1CQ5T751 118 aa3.07□□□□□ -1.92
CALCOCO1-214ENST00000549613 KRTAP4-2Q9BYR5 136 aa3.04□□□□□ -1.92
CALCOCO1-214ENST00000549613 PRM1P04553 51 aa3.01□□□□□ -1.93
CALCOCO1-214ENST00000549613 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.87□□□□□ -1.95
CALCOCO1-214ENST00000549613 PHGR1C9JFL3 82 aa2.71□□□□□ -1.98
CALCOCO1-214ENST00000549613 KRTAP5-11Q6L8G4 156 aa2.71□□□□□ -1.98
CALCOCO1-214ENST00000549613 KRTAP21-2Q3LI59 83 aa2.68□□□□□ -1.98
CALCOCO1-214ENST00000549613 LCE1FQ5T754 118 aa2.5□□□□□ -2.01
CALCOCO1-214ENST00000549613 KRTAP4-4Q9BYR3 166 aa2.36□□□□□ -2.03
CALCOCO1-214ENST00000549613 MUC19Q7Z5P9 8384 aa2.09□□□□□ -2.07
CALCOCO1-214ENST00000549613 KRTAP21-1Q3LI58 79 aa2.06□□□□□ -2.08
CALCOCO1-214ENST00000549613 MUC16Q8WXI7 14507 aa1.54□□□□□ -2.16
Retrieved 78 of 20,778 RNA–protein pairs in 82.7 ms