RNA–Protein interactions for RNA: ENST00000549472.1

ERBB3-210, Transcript of erb-b2 receptor tyrosine kinase 3, humanhuman

TSL 5

Gene ERBB3, Length 519 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB3-210ENST00000549472 MT1EP04732 61 aa4.3□□□□□ -1.72
ERBB3-210ENST00000549472 KRTAP19-4Q3LI73 84 aa4.3□□□□□ -1.72
ERBB3-210ENST00000549472 SPRR5A0A1B0GTR4 108 aa4.29□□□□□ -1.72
ERBB3-210ENST00000549472 KRTAP5-9P26371 169 aa4.29□□□□□ -1.72
ERBB3-210ENST00000549472 MT1LQ93083 61 aa4.23□□□□□ -1.73
ERBB3-210ENST00000549472 LCE3CQ5T5A8 94 aa4.2□□□□□ -1.74
ERBB3-210ENST00000549472 SPRR2EP22531 72 aa4.18□□□□□ -1.74
ERBB3-210ENST00000549472 SPRR2BP35325 72 aa4.18□□□□□ -1.74
ERBB3-210ENST00000549472 SPRR2AP35326 72 aa4.18□□□□□ -1.74
ERBB3-210ENST00000549472 LOC100996750A0A140TA64 210 aa4.15□□□□□ -1.75
ERBB3-210ENST00000549472 KRTAP4-6Q9BYQ5 205 aa4.15□□□□□ -1.75
ERBB3-210ENST00000549472 KRTAP20-1Q3LI63 56 aa4.14□□□□□ -1.75
ERBB3-210ENST00000549472 KRTAP19-3Q7Z4W3 81 aa4.14□□□□□ -1.75
ERBB3-210ENST00000549472 MUC12Q9UKN1 5478 aa4.13□□□□□ -1.75
ERBB3-210ENST00000549472 MT1GP13640 62 aa4.12□□□□□ -1.75
ERBB3-210ENST00000549472 NDUFAF8A1L188 74 aa4.11□□□□□ -1.75
ERBB3-210ENST00000549472 LCE1AQ5T7P2 110 aa4.11□□□□□ -1.75
ERBB3-210ENST00000549472 MDN1Q9NU22 5596 aa4.07□□□□□ -1.76
ERBB3-210ENST00000549472 NEBP20929 6669 aa4.06□□□□□ -1.76
ERBB3-210ENST00000549472 LCE5AQ5TCM9 118 aa4.06□□□□□ -1.76
ERBB3-210ENST00000549472 SPRR2DP22532 72 aa4.05□□□□□ -1.76
ERBB3-210ENST00000549472 MT1MQ8N339 61 aa4.05□□□□□ -1.76
ERBB3-210ENST00000549472 KRTAP4-7Q9BYR0 210 aa4.04□□□□□ -1.76
ERBB3-210ENST00000549472 KRTAP9-6A8MVA2 160 aa3.95□□□□□ -1.78
ERBB3-210ENST00000549472 KRTAP4-3Q9BYR4 195 aa3.92□□□□□ -1.78
ERBB3-210ENST00000549472 KRTAP2-3P0C7H8 128 aa3.88□□□□□ -1.79
ERBB3-210ENST00000549472 LCE3BQ5TA77 95 aa3.88□□□□□ -1.79
ERBB3-210ENST00000549472 KRTAP2-4Q9BYR9 128 aa3.88□□□□□ -1.79
ERBB3-210ENST00000549472 DSTQ03001 7570 aaKnown RBP3.79□□□□□ -1.8
ERBB3-210ENST00000549472 KRTAP2-2Q9BYT5 123 aa3.78□□□□□ -1.8
ERBB3-210ENST00000549472 KRTAP2-1Q9BYU5 128 aa3.78□□□□□ -1.8
ERBB3-210ENST00000549472 INE1O15225 51 aa3.71□□□□□ -1.82
ERBB3-210ENST00000549472 GPR98Q8WXG9 6306 aa3.71□□□□□ -1.82
ERBB3-210ENST00000549472 KRTAP5-5Q701N2 237 aaPredicted RBP3.67□□□□□ -1.82
ERBB3-210ENST00000549472 MT1AP04731 61 aa3.61□□□□□ -1.83
ERBB3-210ENST00000549472 LCE4AQ5TA78 99 aa3.59□□□□□ -1.83
ERBB3-210ENST00000549472 KRTAP6-1Q3LI64 71 aa3.54□□□□□ -1.84
ERBB3-210ENST00000549472 KRTAP12-4P60329 112 aa3.52□□□□□ -1.85
ERBB3-210ENST00000549472 KRTAP5-4Q6L8H1 288 aa3.52□□□□□ -1.85
ERBB3-210ENST00000549472 MT4P47944 62 aa3.49□□□□□ -1.85
ERBB3-210ENST00000549472 KRTAP4-9Q9BYQ8 210 aa3.46□□□□□ -1.86
ERBB3-210ENST00000549472 LCE1DQ5T752 114 aa3.42□□□□□ -1.86
ERBB3-210ENST00000549472 KRTAP9-4Q9BYQ2 154 aa3.42□□□□□ -1.86
ERBB3-210ENST00000549472 SYNE1Q8NF91 8797 aaKnown RBP3.4□□□□□ -1.87
ERBB3-210ENST00000549472 KRTAP9-9Q9BYP9 154 aa3.38□□□□□ -1.87
ERBB3-210ENST00000549472 HMCN1Q96RW7 5635 aa3.34□□□□□ -1.87
ERBB3-210ENST00000549472 KRTAP20-2Q3LI61 65 aa3.32□□□□□ -1.88
ERBB3-210ENST00000549472 MT3P25713 68 aa3.27□□□□□ -1.89
ERBB3-210ENST00000549472 KRTAP6-2Q3LI66 62 aa3.25□□□□□ -1.89
ERBB3-210ENST00000549472 KRTAP5-3Q6L8H2 238 aa3.25□□□□□ -1.89
ERBB3-210ENST00000549472 AHNAK2Q8IVF2 5795 aa3.24□□□□□ -1.89
ERBB3-210ENST00000549472 KRTAP5-10Q6L8G5 202 aa3.22□□□□□ -1.89
ERBB3-210ENST00000549472 KRTAP4-12Q9BQ66 201 aa3.22□□□□□ -1.89
ERBB3-210ENST00000549472 KRTAP4-2Q9BYR5 136 aa3.2□□□□□ -1.9
ERBB3-210ENST00000549472 KRTAP5-7Q6L8G8 165 aa3.18□□□□□ -1.9
ERBB3-210ENST00000549472 KRTAP5-2Q701N4 177 aa3.17□□□□□ -1.9
ERBB3-210ENST00000549472 LCE3DQ9BYE3 92 aa3.17□□□□□ -1.9
ERBB3-210ENST00000549472 LCE3EQ5T5B0 92 aa3.09□□□□□ -1.91
ERBB3-210ENST00000549472 OBSCNQ5VST9 7968 aa2.97□□□□□ -1.93
ERBB3-210ENST00000549472 KRTAP4-11Q9BYQ6 195 aa2.95□□□□□ -1.94
ERBB3-210ENST00000549472 LCE1EQ5T753 118 aa2.85□□□□□ -1.95
ERBB3-210ENST00000549472 AHNAKQ09666 5890 aaKnown RBP2.84□□□□□ -1.95
ERBB3-210ENST00000549472 MUC5ACP98088 5654 aa2.81□□□□□ -1.96
ERBB3-210ENST00000549472 KRTAP5-8O75690 187 aa2.79□□□□□ -1.96
ERBB3-210ENST00000549472 KRTAP5-1Q6L8H4 278 aa2.74□□□□□ -1.97
ERBB3-210ENST00000549472 MUC5BQ9HC84 5762 aaPredicted RBP2.73□□□□□ -1.97
ERBB3-210ENST00000549472 PRM1P04553 51 aa2.68□□□□□ -1.98
ERBB3-210ENST00000549472 LCE1BQ5T7P3 118 aa2.68□□□□□ -1.98
ERBB3-210ENST00000549472 LCE1CQ5T751 118 aa2.65□□□□□ -1.99
ERBB3-210ENST00000549472 LCE1FQ5T754 118 aa2.53□□□□□ -2
ERBB3-210ENST00000549472 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.5□□□□□ -2.01
ERBB3-210ENST00000549472 KRTAP5-11Q6L8G4 156 aa2.34□□□□□ -2.03
ERBB3-210ENST00000549472 KRTAP21-2Q3LI59 83 aa2.33□□□□□ -2.04
ERBB3-210ENST00000549472 KRTAP4-4Q9BYR3 166 aa2.01□□□□□ -2.09
ERBB3-210ENST00000549472 PHGR1C9JFL3 82 aa2□□□□□ -2.09
ERBB3-210ENST00000549472 MUC19Q7Z5P9 8384 aa1.78□□□□□ -2.13
ERBB3-210ENST00000549472 KRTAP21-1Q3LI58 79 aa1.68□□□□□ -2.14
ERBB3-210ENST00000549472 MUC16Q8WXI7 14507 aa1.31□□□□□ -2.2
Retrieved 78 of 20,778 RNA–protein pairs in 5.7 ms