RNA–Protein interactions for RNA: ENST00000549078.5

KRT18-206, Transcript of keratin 18, humanhuman

TSL 5

Gene KRT18, Length 2,088 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT18-206ENST00000549078 MUC12Q9UKN1 5478 aa6.99□□□□□ -1.29
KRT18-206ENST00000549078 MT1LQ93083 61 aa6.92□□□□□ -1.3
KRT18-206ENST00000549078 KRTAP9-7A8MTY7 169 aa6.91□□□□□ -1.3
KRT18-206ENST00000549078 KRTAP19-3Q7Z4W3 81 aa6.84□□□□□ -1.31
KRT18-206ENST00000549078 LCE1AQ5T7P2 110 aa6.81□□□□□ -1.32
KRT18-206ENST00000549078 MDN1Q9NU22 5596 aa6.8□□□□□ -1.32
KRT18-206ENST00000549078 MT1GP13640 62 aa6.77□□□□□ -1.33
KRT18-206ENST00000549078 SPRR2EP22531 72 aa6.77□□□□□ -1.33
KRT18-206ENST00000549078 SPRR2BP35325 72 aa6.77□□□□□ -1.33
KRT18-206ENST00000549078 SPRR2AP35326 72 aa6.77□□□□□ -1.33
KRT18-206ENST00000549078 LCE5AQ5TCM9 118 aa6.75□□□□□ -1.33
KRT18-206ENST00000549078 KRTAP19-4Q3LI73 84 aa6.72□□□□□ -1.33
KRT18-206ENST00000549078 LCE3CQ5T5A8 94 aa6.72□□□□□ -1.33
KRT18-206ENST00000549078 KRTAP4-7Q9BYR0 210 aa6.7□□□□□ -1.34
KRT18-206ENST00000549078 MT1MQ8N339 61 aa6.69□□□□□ -1.34
KRT18-206ENST00000549078 SPRR5A0A1B0GTR4 108 aa6.66□□□□□ -1.34
KRT18-206ENST00000549078 LUZP6Q538Z0 58 aa6.62□□□□□ -1.35
KRT18-206ENST00000549078 NEBP20929 6669 aa6.6□□□□□ -1.35
KRT18-206ENST00000549078 KRTAP4-3Q9BYR4 195 aa6.57□□□□□ -1.36
KRT18-206ENST00000549078 SPRR2DP22532 72 aa6.52□□□□□ -1.37
KRT18-206ENST00000549078 DSTQ03001 7570 aaKnown RBP6.39□□□□□ -1.39
KRT18-206ENST00000549078 KRTAP9-6A8MVA2 160 aa6.38□□□□□ -1.39
KRT18-206ENST00000549078 LOC100996750A0A140TA64 210 aa6.3□□□□□ -1.4
KRT18-206ENST00000549078 LCE3BQ5TA77 95 aa6.28□□□□□ -1.4
KRT18-206ENST00000549078 A0A0A0MQY5 61 aa6.26□□□□□ -1.41
KRT18-206ENST00000549078 KRTAP2-3P0C7H8 128 aa6.18□□□□□ -1.42
KRT18-206ENST00000549078 KRTAP2-4Q9BYR9 128 aa6.18□□□□□ -1.42
KRT18-206ENST00000549078 KRTAP20-1Q3LI63 56 aa6.11□□□□□ -1.43
KRT18-206ENST00000549078 KRTAP5-5Q701N2 237 aaPredicted RBP6.05□□□□□ -1.44
KRT18-206ENST00000549078 KRTAP2-2Q9BYT5 123 aa6.03□□□□□ -1.44
KRT18-206ENST00000549078 KRTAP2-1Q9BYU5 128 aa6.03□□□□□ -1.44
KRT18-206ENST00000549078 MT1AP04731 61 aa5.87□□□□□ -1.47
KRT18-206ENST00000549078 KRTAP5-4Q6L8H1 288 aa5.86□□□□□ -1.47
KRT18-206ENST00000549078 KRTAP6-1Q3LI64 71 aa5.84□□□□□ -1.47
KRT18-206ENST00000549078 LCE4AQ5TA78 99 aa5.78□□□□□ -1.48
KRT18-206ENST00000549078 SYNE1Q8NF91 8797 aaKnown RBP5.74□□□□□ -1.49
KRT18-206ENST00000549078 INE1O15225 51 aa5.73□□□□□ -1.49
KRT18-206ENST00000549078 KRTAP4-9Q9BYQ8 210 aa5.68□□□□□ -1.5
KRT18-206ENST00000549078 MT4P47944 62 aa5.68□□□□□ -1.5
KRT18-206ENST00000549078 KRTAP12-4P60329 112 aa5.65□□□□□ -1.51
KRT18-206ENST00000549078 KRTAP4-6Q9BYQ5 205 aa5.63□□□□□ -1.51
KRT18-206ENST00000549078 LCE1DQ5T752 114 aa5.61□□□□□ -1.51
KRT18-206ENST00000549078 KRTAP9-4Q9BYQ2 154 aa5.6□□□□□ -1.51
KRT18-206ENST00000549078 HMCN1Q96RW7 5635 aa5.52□□□□□ -1.53
KRT18-206ENST00000549078 KRTAP20-2Q3LI61 65 aa5.49□□□□□ -1.53
KRT18-206ENST00000549078 KRTAP6-2Q3LI66 62 aa5.41□□□□□ -1.54
KRT18-206ENST00000549078 MT3P25713 68 aa5.33□□□□□ -1.56
KRT18-206ENST00000549078 KRTAP5-3Q6L8H2 238 aa5.3□□□□□ -1.56
KRT18-206ENST00000549078 KRTAP5-2Q701N4 177 aa5.28□□□□□ -1.56
KRT18-206ENST00000549078 LCE3DQ9BYE3 92 aa5.01□□□□□ -1.61
KRT18-206ENST00000549078 AHNAK2Q8IVF2 5795 aa4.98□□□□□ -1.61
KRT18-206ENST00000549078 OBSCNQ5VST9 7968 aa4.91□□□□□ -1.62
KRT18-206ENST00000549078 LCE3EQ5T5B0 92 aa4.84□□□□□ -1.63
KRT18-206ENST00000549078 KRTAP4-11Q9BYQ6 195 aa4.81□□□□□ -1.64
KRT18-206ENST00000549078 KRTAP5-10Q6L8G5 202 aa4.76□□□□□ -1.65
KRT18-206ENST00000549078 LCE1EQ5T753 118 aa4.67□□□□□ -1.66
KRT18-206ENST00000549078 KRTAP5-8O75690 187 aa4.63□□□□□ -1.67
KRT18-206ENST00000549078 GPR98Q8WXG9 6306 aa4.63□□□□□ -1.67
KRT18-206ENST00000549078 KRTAP5-1Q6L8H4 278 aa4.61□□□□□ -1.67
KRT18-206ENST00000549078 KRTAP5-7Q6L8G8 165 aa4.44□□□□□ -1.7
KRT18-206ENST00000549078 MUC5ACP98088 5654 aa4.43□□□□□ -1.7
KRT18-206ENST00000549078 LCE1BQ5T7P3 118 aa4.39□□□□□ -1.71
KRT18-206ENST00000549078 KRTAP4-2Q9BYR5 136 aa4.39□□□□□ -1.71
KRT18-206ENST00000549078 LCE1CQ5T751 118 aa4.35□□□□□ -1.71
KRT18-206ENST00000549078 PRM1P04553 51 aa4.28□□□□□ -1.72
KRT18-206ENST00000549078 KRTAP9-9Q9BYP9 154 aa4.2□□□□□ -1.74
KRT18-206ENST00000549078 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.06□□□□□ -1.76
KRT18-206ENST00000549078 MUC5BQ9HC84 5762 aaPredicted RBP3.99□□□□□ -1.77
KRT18-206ENST00000549078 KRTAP5-11Q6L8G4 156 aa3.85□□□□□ -1.79
KRT18-206ENST00000549078 KRTAP21-2Q3LI59 83 aa3.83□□□□□ -1.8
KRT18-206ENST00000549078 AHNAKQ09666 5890 aaKnown RBP3.82□□□□□ -1.8
KRT18-206ENST00000549078 KRTAP4-12Q9BQ66 201 aa3.71□□□□□ -1.82
KRT18-206ENST00000549078 LCE1FQ5T754 118 aa3.51□□□□□ -1.85
KRT18-206ENST00000549078 KRTAP4-4Q9BYR3 166 aa3.43□□□□□ -1.86
KRT18-206ENST00000549078 PHGR1C9JFL3 82 aa3.32□□□□□ -1.88
KRT18-206ENST00000549078 MUC19Q7Z5P9 8384 aa2.97□□□□□ -1.93
KRT18-206ENST00000549078 KRTAP21-1Q3LI58 79 aa2.72□□□□□ -1.97
KRT18-206ENST00000549078 MUC16Q8WXI7 14507 aa2.11□□□□□ -2.07
Retrieved 78 of 20,778 RNA–protein pairs in 11.5 ms