RNA–Protein interactions for RNA: ENST00000548823.1

CTDSP2-204, Transcript of CTD small phosphatase 2, humanhuman

TSL 1 (best) BASIC

Gene CTDSP2, Length 1,368 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP2-204ENST00000548823 PP632Q6XCG6 107 aa8.1□□□□□ -1.11
CTDSP2-204ENST00000548823 MT1XP80297 61 aa8.08□□□□□ -1.12
CTDSP2-204ENST00000548823 PRO2289Q9P1D8 64 aa8.04□□□□□ -1.12
CTDSP2-204ENST00000548823 LOC100996750A0A140TA64 210 aa7.97□□□□□ -1.13
CTDSP2-204ENST00000548823 KRTAP4-6Q9BYQ5 205 aa7.97□□□□□ -1.13
CTDSP2-204ENST00000548823 DSTQ03001 7570 aaKnown RBP7.91□□□□□ -1.14
CTDSP2-204ENST00000548823 KRTAP4-8A0A0G2JLE6 195 aa7.89□□□□□ -1.15
CTDSP2-204ENST00000548823 KRTAP4-8Q9BYQ9 185 aa7.89□□□□□ -1.15
CTDSP2-204ENST00000548823 KRTAP4-9Q9BYQ8 210 aa7.83□□□□□ -1.16
CTDSP2-204ENST00000548823 LCE3AQ5TA76 89 aa7.73□□□□□ -1.17
CTDSP2-204ENST00000548823 KRTAP10-7P60409 375 aaPredicted RBP7.72□□□□□ -1.17
CTDSP2-204ENST00000548823 KRTAP10-12P60413 245 aa7.72□□□□□ -1.17
CTDSP2-204ENST00000548823 LCE1DQ5T752 114 aa7.56□□□□□ -1.2
CTDSP2-204ENST00000548823 KRTAP15-1Q3LI76 137 aa7.53□□□□□ -1.2
CTDSP2-204ENST00000548823 HMCN1Q96RW7 5635 aa7.52□□□□□ -1.21
CTDSP2-204ENST00000548823 AHNAK2Q8IVF2 5795 aa7.48□□□□□ -1.21
CTDSP2-204ENST00000548823 KRTAP12-3P60328 96 aa7.46□□□□□ -1.22
CTDSP2-204ENST00000548823 KRTAP5-10Q6L8G5 202 aa7.46□□□□□ -1.22
CTDSP2-204ENST00000548823 LCE5AQ5TCM9 118 aa7.38□□□□□ -1.23
CTDSP2-204ENST00000548823 MT4P47944 62 aa7.34□□□□□ -1.23
CTDSP2-204ENST00000548823 LCE4AQ5TA78 99 aa7.33□□□□□ -1.24
CTDSP2-204ENST00000548823 KRTAP19-5Q3LI72 72 aa7.32□□□□□ -1.24
CTDSP2-204ENST00000548823 KRTAP5-7Q6L8G8 165 aa7.3□□□□□ -1.24
CTDSP2-204ENST00000548823 SPRR5A0A1B0GTR4 108 aa7.26□□□□□ -1.25
CTDSP2-204ENST00000548823 KRTAP19-3Q7Z4W3 81 aa7.23□□□□□ -1.25
CTDSP2-204ENST00000548823 KRTAP19-7Q3SYF9 63 aa7.2□□□□□ -1.26
CTDSP2-204ENST00000548823 KRTAP19-4Q3LI73 84 aa7.15□□□□□ -1.26
CTDSP2-204ENST00000548823 MT1EP04732 61 aa7.11□□□□□ -1.27
CTDSP2-204ENST00000548823 KRTAP5-3Q6L8H2 238 aa7.08□□□□□ -1.28
CTDSP2-204ENST00000548823 LUZP6Q538Z0 58 aa7.04□□□□□ -1.28
CTDSP2-204ENST00000548823 KRTAP5-4Q6L8H1 288 aa7.03□□□□□ -1.28
CTDSP2-204ENST00000548823 LCE3CQ5T5A8 94 aa6.99□□□□□ -1.29
CTDSP2-204ENST00000548823 MT1GP13640 62 aa6.98□□□□□ -1.29
CTDSP2-204ENST00000548823 MT1LQ93083 61 aa6.96□□□□□ -1.29
CTDSP2-204ENST00000548823 NDUFAF8A1L188 74 aa6.95□□□□□ -1.3
CTDSP2-204ENST00000548823 MT1MQ8N339 61 aa6.83□□□□□ -1.32
CTDSP2-204ENST00000548823 KRTAP20-2Q3LI61 65 aa6.69□□□□□ -1.34
CTDSP2-204ENST00000548823 KRTAP4-3Q9BYR4 195 aa6.69□□□□□ -1.34
CTDSP2-204ENST00000548823 KRTAP4-12Q9BQ66 201 aa6.68□□□□□ -1.34
CTDSP2-204ENST00000548823 KRTAP9-9Q9BYP9 154 aa6.68□□□□□ -1.34
CTDSP2-204ENST00000548823 KRTAP9-4Q9BYQ2 154 aa6.68□□□□□ -1.34
CTDSP2-204ENST00000548823 KRTAP4-7Q9BYR0 210 aa6.68□□□□□ -1.34
CTDSP2-204ENST00000548823 KRTAP9-6A8MVA2 160 aa6.57□□□□□ -1.36
CTDSP2-204ENST00000548823 AHNAKQ09666 5890 aaKnown RBP6.43□□□□□ -1.38
CTDSP2-204ENST00000548823 KRTAP12-4P60329 112 aa6.42□□□□□ -1.38
CTDSP2-204ENST00000548823 H3BS24 57 aa6.39□□□□□ -1.39
CTDSP2-204ENST00000548823 KRTAP5-5Q701N2 237 aaPredicted RBP6.35□□□□□ -1.39
CTDSP2-204ENST00000548823 MUC5ACP98088 5654 aa6.33□□□□□ -1.4
CTDSP2-204ENST00000548823 KRTAP4-11Q9BYQ6 195 aa6.32□□□□□ -1.4
CTDSP2-204ENST00000548823 MUC5BQ9HC84 5762 aaPredicted RBP6.27□□□□□ -1.41
CTDSP2-204ENST00000548823 A0A0A0MQY5 61 aa6.23□□□□□ -1.41
CTDSP2-204ENST00000548823 SYNE1Q8NF91 8797 aaKnown RBP6.23□□□□□ -1.41
CTDSP2-204ENST00000548823 KRTAP5-8O75690 187 aa6.17□□□□□ -1.42
CTDSP2-204ENST00000548823 KRTAP4-2Q9BYR5 136 aa6.17□□□□□ -1.42
CTDSP2-204ENST00000548823 KRTAP5-2Q701N4 177 aa6□□□□□ -1.45
CTDSP2-204ENST00000548823 MT1AP04731 61 aa5.95□□□□□ -1.46
CTDSP2-204ENST00000548823 INE1O15225 51 aa5.86□□□□□ -1.47
CTDSP2-204ENST00000548823 KRTAP6-1Q3LI64 71 aa5.83□□□□□ -1.48
CTDSP2-204ENST00000548823 OBSCNQ5VST9 7968 aa5.81□□□□□ -1.48
CTDSP2-204ENST00000548823 KRTAP6-2Q3LI66 62 aa5.58□□□□□ -1.52
CTDSP2-204ENST00000548823 KRTAP5-1Q6L8H4 278 aa5.55□□□□□ -1.52
CTDSP2-204ENST00000548823 MT3P25713 68 aa5.38□□□□□ -1.55
CTDSP2-204ENST00000548823 LCE3DQ9BYE3 92 aa5.28□□□□□ -1.56
CTDSP2-204ENST00000548823 LCE3EQ5T5B0 92 aa5.16□□□□□ -1.58
CTDSP2-204ENST00000548823 LCE1EQ5T753 118 aa5.01□□□□□ -1.61
CTDSP2-204ENST00000548823 LCE1BQ5T7P3 118 aa4.76□□□□□ -1.65
CTDSP2-204ENST00000548823 LCE1CQ5T751 118 aa4.65□□□□□ -1.67
CTDSP2-204ENST00000548823 PRM1P04553 51 aa4.54□□□□□ -1.68
CTDSP2-204ENST00000548823 KRTAP5-11Q6L8G4 156 aa4.46□□□□□ -1.7
CTDSP2-204ENST00000548823 LCE1FQ5T754 118 aa4.39□□□□□ -1.71
CTDSP2-204ENST00000548823 PHGR1C9JFL3 82 aa4.38□□□□□ -1.71
CTDSP2-204ENST00000548823 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.22□□□□□ -1.73
CTDSP2-204ENST00000548823 KRTAP21-2Q3LI59 83 aa3.84□□□□□ -1.79
CTDSP2-204ENST00000548823 MUC19Q7Z5P9 8384 aa3.63□□□□□ -1.83
CTDSP2-204ENST00000548823 KRTAP4-4Q9BYR3 166 aa3.55□□□□□ -1.84
CTDSP2-204ENST00000548823 KRTAP21-1Q3LI58 79 aa3.35□□□□□ -1.87
CTDSP2-204ENST00000548823 MUC16Q8WXI7 14507 aa2.53□□□□□ -2
Retrieved 77 of 20,778 RNA–protein pairs in 12.8 ms