RNA–Protein interactions for RNA: ENST00000548796.1

PACS2-208, Transcript of phosphofurin acidic cluster sorting protein 2, humanhuman

TSL 5

Gene PACS2, Length 1,621 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACS2-208ENST00000548796 SYNE2Q8WXH0 6885 aaKnown RBP6.94□□□□□ -1.3
PACS2-208ENST00000548796 KRTAP9-7A8MTY7 169 aa6.94□□□□□ -1.3
PACS2-208ENST00000548796 SPRR2FQ96RM1 72 aa6.87□□□□□ -1.31
PACS2-208ENST00000548796 KRTAP19-3Q7Z4W3 81 aa6.86□□□□□ -1.31
PACS2-208ENST00000548796 H3BS24 57 aa6.83□□□□□ -1.32
PACS2-208ENST00000548796 MT1GP13640 62 aa6.83□□□□□ -1.32
PACS2-208ENST00000548796 KRTAP4-7Q9BYR0 210 aa6.81□□□□□ -1.32
PACS2-208ENST00000548796 KRTAP5-9P26371 169 aa6.73□□□□□ -1.33
PACS2-208ENST00000548796 MT1MQ8N339 61 aa6.73□□□□□ -1.33
PACS2-208ENST00000548796 KRTAP6-3Q3LI67 103 aa6.72□□□□□ -1.33
PACS2-208ENST00000548796 LCE5AQ5TCM9 118 aa6.69□□□□□ -1.34
PACS2-208ENST00000548796 KRTAP9-6A8MVA2 160 aa6.68□□□□□ -1.34
PACS2-208ENST00000548796 MUC12Q9UKN1 5478 aa6.61□□□□□ -1.35
PACS2-208ENST00000548796 KRTAP4-3Q9BYR4 195 aa6.57□□□□□ -1.36
PACS2-208ENST00000548796 LCE1AQ5T7P2 110 aa6.53□□□□□ -1.36
PACS2-208ENST00000548796 SPRR2EP22531 72 aa6.47□□□□□ -1.37
PACS2-208ENST00000548796 SPRR2BP35325 72 aa6.47□□□□□ -1.37
PACS2-208ENST00000548796 SPRR2AP35326 72 aa6.47□□□□□ -1.37
PACS2-208ENST00000548796 MDN1Q9NU22 5596 aa6.45□□□□□ -1.38
PACS2-208ENST00000548796 A0A0A0MQY5 61 aa6.43□□□□□ -1.38
PACS2-208ENST00000548796 NEBP20929 6669 aa6.43□□□□□ -1.38
PACS2-208ENST00000548796 LOC100996750A0A140TA64 210 aa6.39□□□□□ -1.39
PACS2-208ENST00000548796 KRTAP2-3P0C7H8 128 aa6.32□□□□□ -1.4
PACS2-208ENST00000548796 KRTAP2-4Q9BYR9 128 aa6.32□□□□□ -1.4
PACS2-208ENST00000548796 KRTAP2-1Q9BYU5 128 aa6.32□□□□□ -1.4
PACS2-208ENST00000548796 SPRR2DP22532 72 aa6.23□□□□□ -1.41
PACS2-208ENST00000548796 KRTAP20-1Q3LI63 56 aa6.08□□□□□ -1.44
PACS2-208ENST00000548796 DSTQ03001 7570 aaKnown RBP6.08□□□□□ -1.44
PACS2-208ENST00000548796 KRTAP5-5Q701N2 237 aaPredicted RBP6.04□□□□□ -1.44
PACS2-208ENST00000548796 MT1AP04731 61 aa6.01□□□□□ -1.45
PACS2-208ENST00000548796 INE1O15225 51 aa5.99□□□□□ -1.45
PACS2-208ENST00000548796 LCE3BQ5TA77 95 aa5.96□□□□□ -1.45
PACS2-208ENST00000548796 KRTAP6-1Q3LI64 71 aa5.92□□□□□ -1.46
PACS2-208ENST00000548796 KRTAP2-2Q9BYT5 123 aa5.83□□□□□ -1.48
PACS2-208ENST00000548796 KRTAP9-4Q9BYQ2 154 aa5.69□□□□□ -1.5
PACS2-208ENST00000548796 KRTAP5-4Q6L8H1 288 aa5.68□□□□□ -1.5
PACS2-208ENST00000548796 SYNE1Q8NF91 8797 aaKnown RBP5.62□□□□□ -1.51
PACS2-208ENST00000548796 KRTAP12-4P60329 112 aa5.59□□□□□ -1.51
PACS2-208ENST00000548796 LCE4AQ5TA78 99 aa5.56□□□□□ -1.52
PACS2-208ENST00000548796 KRTAP4-9Q9BYQ8 210 aa5.48□□□□□ -1.53
PACS2-208ENST00000548796 MT3P25713 68 aa5.45□□□□□ -1.54
PACS2-208ENST00000548796 KRTAP6-2Q3LI66 62 aa5.42□□□□□ -1.54
PACS2-208ENST00000548796 MT4P47944 62 aa5.37□□□□□ -1.55
PACS2-208ENST00000548796 LCE3DQ9BYE3 92 aa5.37□□□□□ -1.55
PACS2-208ENST00000548796 KRTAP4-6Q9BYQ5 205 aa5.35□□□□□ -1.55
PACS2-208ENST00000548796 KRTAP20-2Q3LI61 65 aa5.3□□□□□ -1.56
PACS2-208ENST00000548796 LCE1DQ5T752 114 aa5.3□□□□□ -1.56
PACS2-208ENST00000548796 LCE3EQ5T5B0 92 aa5.26□□□□□ -1.57
PACS2-208ENST00000548796 HMCN1Q96RW7 5635 aa5.24□□□□□ -1.57
PACS2-208ENST00000548796 KRTAP5-2Q701N4 177 aa5.19□□□□□ -1.58
PACS2-208ENST00000548796 KRTAP5-3Q6L8H2 238 aa5.08□□□□□ -1.6
PACS2-208ENST00000548796 GPR98Q8WXG9 6306 aa5.08□□□□□ -1.6
PACS2-208ENST00000548796 AHNAK2Q8IVF2 5795 aa4.92□□□□□ -1.62
PACS2-208ENST00000548796 OBSCNQ5VST9 7968 aa4.84□□□□□ -1.64
PACS2-208ENST00000548796 KRTAP5-10Q6L8G5 202 aa4.78□□□□□ -1.64
PACS2-208ENST00000548796 LCE1EQ5T753 118 aa4.68□□□□□ -1.66
PACS2-208ENST00000548796 PRM1P04553 51 aa4.66□□□□□ -1.66
PACS2-208ENST00000548796 KRTAP5-7Q6L8G8 165 aa4.54□□□□□ -1.68
PACS2-208ENST00000548796 KRTAP4-11Q9BYQ6 195 aa4.54□□□□□ -1.68
PACS2-208ENST00000548796 KRTAP5-1Q6L8H4 278 aa4.44□□□□□ -1.7
PACS2-208ENST00000548796 LCE1BQ5T7P3 118 aa4.37□□□□□ -1.71
PACS2-208ENST00000548796 KRTAP5-8O75690 187 aa4.35□□□□□ -1.71
PACS2-208ENST00000548796 LCE1CQ5T751 118 aa4.35□□□□□ -1.71
PACS2-208ENST00000548796 KRTAP4-2Q9BYR5 136 aa4.32□□□□□ -1.72
PACS2-208ENST00000548796 MUC5ACP98088 5654 aa4.29□□□□□ -1.72
PACS2-208ENST00000548796 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.1□□□□□ -1.75
PACS2-208ENST00000548796 MUC5BQ9HC84 5762 aaPredicted RBP4.04□□□□□ -1.76
PACS2-208ENST00000548796 KRTAP9-9Q9BYP9 154 aa4.03□□□□□ -1.77
PACS2-208ENST00000548796 AHNAKQ09666 5890 aaKnown RBP3.96□□□□□ -1.77
PACS2-208ENST00000548796 KRTAP21-2Q3LI59 83 aa3.87□□□□□ -1.79
PACS2-208ENST00000548796 KRTAP5-11Q6L8G4 156 aa3.82□□□□□ -1.8
PACS2-208ENST00000548796 KRTAP4-12Q9BQ66 201 aa3.51□□□□□ -1.85
PACS2-208ENST00000548796 LCE1FQ5T754 118 aa3.42□□□□□ -1.86
PACS2-208ENST00000548796 KRTAP4-4Q9BYR3 166 aa3.4□□□□□ -1.87
PACS2-208ENST00000548796 PHGR1C9JFL3 82 aa3.26□□□□□ -1.89
PACS2-208ENST00000548796 KRTAP21-1Q3LI58 79 aa2.9□□□□□ -1.95
PACS2-208ENST00000548796 MUC19Q7Z5P9 8384 aa2.78□□□□□ -1.96
PACS2-208ENST00000548796 MUC16Q8WXI7 14507 aa2.15□□□□□ -2.07
Retrieved 78 of 20,778 RNA–protein pairs in 504.1 ms