RNA–Protein interactions for RNA: ENST00000548436.5

PRPF40B-208, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 2

Gene PRPF40B, Length 2,059 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-208ENST00000548436 KRTAP9-6A8MVA2 160 aa6.49□□□□□ -1.37
PRPF40B-208ENST00000548436 KRTAP19-4Q3LI73 84 aa6.41□□□□□ -1.38
PRPF40B-208ENST00000548436 MACF1Q9UPN3 7388 aaKnown RBP6.39□□□□□ -1.39
PRPF40B-208ENST00000548436 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.39□□□□□ -1.39
PRPF40B-208ENST00000548436 SYNE2Q8WXH0 6885 aaKnown RBP6.25□□□□□ -1.41
PRPF40B-208ENST00000548436 INE1O15225 51 aa6.19□□□□□ -1.42
PRPF40B-208ENST00000548436 KRTAP9-7A8MTY7 169 aa6.16□□□□□ -1.42
PRPF40B-208ENST00000548436 KRTAP4-3Q9BYR4 195 aa6.16□□□□□ -1.42
PRPF40B-208ENST00000548436 MUC12Q9UKN1 5478 aa6.16□□□□□ -1.42
PRPF40B-208ENST00000548436 KRTAP2-3P0C7H8 128 aa6.16□□□□□ -1.42
PRPF40B-208ENST00000548436 KRTAP2-4Q9BYR9 128 aa6.16□□□□□ -1.42
PRPF40B-208ENST00000548436 KRTAP2-1Q9BYU5 128 aa6.16□□□□□ -1.42
PRPF40B-208ENST00000548436 KRTAP19-3Q7Z4W3 81 aa6.14□□□□□ -1.43
PRPF40B-208ENST00000548436 KRTAP6-3Q3LI67 103 aa6.13□□□□□ -1.43
PRPF40B-208ENST00000548436 MT1MQ8N339 61 aa6.11□□□□□ -1.43
PRPF40B-208ENST00000548436 MT1GP13640 62 aa6.1□□□□□ -1.43
PRPF40B-208ENST00000548436 LOC100996750A0A140TA64 210 aa6.08□□□□□ -1.44
PRPF40B-208ENST00000548436 KRTAP5-9P26371 169 aa6.06□□□□□ -1.44
PRPF40B-208ENST00000548436 SPRR2FQ96RM1 72 aa6.04□□□□□ -1.44
PRPF40B-208ENST00000548436 LCE5AQ5TCM9 118 aa5.98□□□□□ -1.45
PRPF40B-208ENST00000548436 MDN1Q9NU22 5596 aa5.88□□□□□ -1.47
PRPF40B-208ENST00000548436 SPRR2EP22531 72 aa5.83□□□□□ -1.48
PRPF40B-208ENST00000548436 SPRR2BP35325 72 aa5.83□□□□□ -1.48
PRPF40B-208ENST00000548436 SPRR2AP35326 72 aa5.83□□□□□ -1.48
PRPF40B-208ENST00000548436 NEBP20929 6669 aa5.8□□□□□ -1.48
PRPF40B-208ENST00000548436 LCE1AQ5T7P2 110 aa5.79□□□□□ -1.48
PRPF40B-208ENST00000548436 DSTQ03001 7570 aaKnown RBP5.76□□□□□ -1.49
PRPF40B-208ENST00000548436 SPRR2DP22532 72 aa5.62□□□□□ -1.51
PRPF40B-208ENST00000548436 KRTAP6-1Q3LI64 71 aa5.51□□□□□ -1.53
PRPF40B-208ENST00000548436 LCE3BQ5TA77 95 aa5.51□□□□□ -1.53
PRPF40B-208ENST00000548436 MT1AP04731 61 aa5.46□□□□□ -1.54
PRPF40B-208ENST00000548436 KRTAP20-1Q3LI63 56 aa5.46□□□□□ -1.54
PRPF40B-208ENST00000548436 KRTAP5-5Q701N2 237 aaPredicted RBP5.45□□□□□ -1.54
PRPF40B-208ENST00000548436 KRTAP12-4P60329 112 aa5.37□□□□□ -1.55
PRPF40B-208ENST00000548436 KRTAP4-9Q9BYQ8 210 aa5.37□□□□□ -1.55
PRPF40B-208ENST00000548436 KRTAP2-2Q9BYT5 123 aa5.3□□□□□ -1.56
PRPF40B-208ENST00000548436 SYNE1Q8NF91 8797 aaKnown RBP5.26□□□□□ -1.57
PRPF40B-208ENST00000548436 KRTAP9-4Q9BYQ2 154 aa5.16□□□□□ -1.58
PRPF40B-208ENST00000548436 LCE3DQ9BYE3 92 aa5.13□□□□□ -1.59
PRPF40B-208ENST00000548436 LCE3EQ5T5B0 92 aa5.04□□□□□ -1.6
PRPF40B-208ENST00000548436 LCE4AQ5TA78 99 aa4.98□□□□□ -1.61
PRPF40B-208ENST00000548436 KRTAP6-2Q3LI66 62 aa4.97□□□□□ -1.61
PRPF40B-208ENST00000548436 KRTAP5-4Q6L8H1 288 aa4.97□□□□□ -1.61
PRPF40B-208ENST00000548436 MT3P25713 68 aa4.9□□□□□ -1.62
PRPF40B-208ENST00000548436 MT4P47944 62 aa4.88□□□□□ -1.63
PRPF40B-208ENST00000548436 LCE1DQ5T752 114 aa4.85□□□□□ -1.63
PRPF40B-208ENST00000548436 HMCN1Q96RW7 5635 aa4.79□□□□□ -1.64
PRPF40B-208ENST00000548436 KRTAP4-6Q9BYQ5 205 aa4.78□□□□□ -1.64
PRPF40B-208ENST00000548436 PRM1P04553 51 aa4.73□□□□□ -1.65
PRPF40B-208ENST00000548436 KRTAP20-2Q3LI61 65 aa4.68□□□□□ -1.66
PRPF40B-208ENST00000548436 OBSCNQ5VST9 7968 aa4.65□□□□□ -1.67
PRPF40B-208ENST00000548436 KRTAP5-2Q701N4 177 aa4.55□□□□□ -1.68
PRPF40B-208ENST00000548436 KRTAP5-3Q6L8H2 238 aa4.5□□□□□ -1.69
PRPF40B-208ENST00000548436 AHNAK2Q8IVF2 5795 aa4.42□□□□□ -1.7
PRPF40B-208ENST00000548436 GPR98Q8WXG9 6306 aa4.31□□□□□ -1.72
PRPF40B-208ENST00000548436 KRTAP5-10Q6L8G5 202 aa4.23□□□□□ -1.73
PRPF40B-208ENST00000548436 KRTAP4-11Q9BYQ6 195 aa4.14□□□□□ -1.75
PRPF40B-208ENST00000548436 MUC5ACP98088 5654 aa4.09□□□□□ -1.75
PRPF40B-208ENST00000548436 LCE1EQ5T753 118 aa4.08□□□□□ -1.76
PRPF40B-208ENST00000548436 KRTAP5-7Q6L8G8 165 aa3.99□□□□□ -1.77
PRPF40B-208ENST00000548436 KRTAP5-8O75690 187 aa3.98□□□□□ -1.77
PRPF40B-208ENST00000548436 LCE1BQ5T7P3 118 aa3.98□□□□□ -1.77
PRPF40B-208ENST00000548436 KRTAP5-1Q6L8H4 278 aa3.9□□□□□ -1.79
PRPF40B-208ENST00000548436 KRTAP4-2Q9BYR5 136 aa3.88□□□□□ -1.79
PRPF40B-208ENST00000548436 LCE1CQ5T751 118 aa3.85□□□□□ -1.79
PRPF40B-208ENST00000548436 KRTAP9-9Q9BYP9 154 aa3.7□□□□□ -1.82
PRPF40B-208ENST00000548436 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.63□□□□□ -1.83
PRPF40B-208ENST00000548436 KRTAP21-2Q3LI59 83 aa3.58□□□□□ -1.84
PRPF40B-208ENST00000548436 MUC5BQ9HC84 5762 aaPredicted RBP3.57□□□□□ -1.84
PRPF40B-208ENST00000548436 AHNAKQ09666 5890 aaKnown RBP3.48□□□□□ -1.85
PRPF40B-208ENST00000548436 KRTAP5-11Q6L8G4 156 aa3.33□□□□□ -1.88
PRPF40B-208ENST00000548436 KRTAP4-4Q9BYR3 166 aa3.24□□□□□ -1.89
PRPF40B-208ENST00000548436 KRTAP4-12Q9BQ66 201 aa3.16□□□□□ -1.9
PRPF40B-208ENST00000548436 LCE1FQ5T754 118 aa3.04□□□□□ -1.92
PRPF40B-208ENST00000548436 KRTAP21-1Q3LI58 79 aa2.95□□□□□ -1.94
PRPF40B-208ENST00000548436 PHGR1C9JFL3 82 aa2.88□□□□□ -1.95
PRPF40B-208ENST00000548436 MUC19Q7Z5P9 8384 aa2.86□□□□□ -1.95
PRPF40B-208ENST00000548436 MUC16Q8WXI7 14507 aa1.91□□□□□ -2.1
Retrieved 78 of 20,778 RNA–protein pairs in 91.5 ms