RNA–Protein interactions for RNA: ENST00000548401.1

LETMD1-216, Transcript of LETM1 domain containing 1, humanhuman

TSL 3

Gene LETMD1, Length 433 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-216ENST00000548401 BRK1Q8WUW1 75 aa6.36□□□□□ -1.39
LETMD1-216ENST00000548401 KRTAP23-1A1A580 65 aa6.25□□□□□ -1.41
LETMD1-216ENST00000548401 KRTAP19-3Q7Z4W3 81 aa6.25□□□□□ -1.41
LETMD1-216ENST00000548401 LCE5AQ5TCM9 118 aa6.22□□□□□ -1.41
LETMD1-216ENST00000548401 KRTAP12-3P60328 96 aa6.21□□□□□ -1.42
LETMD1-216ENST00000548401 SPRR2DP22532 72 aa6.2□□□□□ -1.42
LETMD1-216ENST00000548401 MT1LQ93083 61 aa6.19□□□□□ -1.42
LETMD1-216ENST00000548401 KRTAP20-1Q3LI63 56 aa6.15□□□□□ -1.42
LETMD1-216ENST00000548401 MT1GP13640 62 aa6.11□□□□□ -1.43
LETMD1-216ENST00000548401 PP632Q6XCG6 107 aa6.09□□□□□ -1.43
LETMD1-216ENST00000548401 KRTAP2-3P0C7H8 128 aa6.08□□□□□ -1.44
LETMD1-216ENST00000548401 KRTAP2-4Q9BYR9 128 aa6.08□□□□□ -1.44
LETMD1-216ENST00000548401 MT1MQ8N339 61 aa6.06□□□□□ -1.44
LETMD1-216ENST00000548401 LCE3BQ5TA77 95 aa6□□□□□ -1.45
LETMD1-216ENST00000548401 PMAIP1Q13794 54 aa5.96□□□□□ -1.46
LETMD1-216ENST00000548401 KRTAP15-1Q3LI76 137 aa5.95□□□□□ -1.46
LETMD1-216ENST00000548401 PRO0628Q9UI54 55 aa5.93□□□□□ -1.46
LETMD1-216ENST00000548401 KRTAP2-2Q9BYT5 123 aa5.92□□□□□ -1.46
LETMD1-216ENST00000548401 KRTAP2-1Q9BYU5 128 aa5.92□□□□□ -1.46
LETMD1-216ENST00000548401 KRTAP4-7Q9BYR0 210 aa5.9□□□□□ -1.46
LETMD1-216ENST00000548401 KRTAP4-3Q9BYR4 195 aa5.9□□□□□ -1.46
LETMD1-216ENST00000548401 KRTAP4-12Q9BQ66 201 aa5.87□□□□□ -1.47
LETMD1-216ENST00000548401 KRTAP19-4Q3LI73 84 aa5.85□□□□□ -1.47
LETMD1-216ENST00000548401 DSTQ03001 7570 aaKnown RBP5.78□□□□□ -1.48
LETMD1-216ENST00000548401 KRTAP9-9Q9BYP9 154 aa5.77□□□□□ -1.49
LETMD1-216ENST00000548401 KRTAP9-4Q9BYQ2 154 aa5.77□□□□□ -1.49
LETMD1-216ENST00000548401 LCE3CQ5T5A8 94 aa5.76□□□□□ -1.49
LETMD1-216ENST00000548401 PRAC1Q96KF2 57 aa5.71□□□□□ -1.5
LETMD1-216ENST00000548401 A0A0A0MQY5 61 aa5.64□□□□□ -1.51
LETMD1-216ENST00000548401 KTN1-AS1Q86SY8 53 aa5.59□□□□□ -1.51
LETMD1-216ENST00000548401 KRTAP5-4Q6L8H1 288 aa5.55□□□□□ -1.52
LETMD1-216ENST00000548401 KRTAP5-5Q701N2 237 aaPredicted RBP5.55□□□□□ -1.52
LETMD1-216ENST00000548401 LCE1DQ5T752 114 aa5.53□□□□□ -1.52
LETMD1-216ENST00000548401 LCE4AQ5TA78 99 aa5.51□□□□□ -1.53
LETMD1-216ENST00000548401 KRTAP9-6A8MVA2 160 aa5.49□□□□□ -1.53
LETMD1-216ENST00000548401 KRTAP4-9Q9BYQ8 210 aa5.46□□□□□ -1.54
LETMD1-216ENST00000548401 MT4P47944 62 aa5.39□□□□□ -1.55
LETMD1-216ENST00000548401 GPR98Q8WXG9 6306 aa5.34□□□□□ -1.55
LETMD1-216ENST00000548401 KRTAP4-2Q9BYR5 136 aa5.32□□□□□ -1.56
LETMD1-216ENST00000548401 MT1AP04731 61 aa5.27□□□□□ -1.57
LETMD1-216ENST00000548401 SPRR5A0A1B0GTR4 108 aa5.25□□□□□ -1.57
LETMD1-216ENST00000548401 HMCN1Q96RW7 5635 aa5.25□□□□□ -1.57
LETMD1-216ENST00000548401 KRTAP6-1Q3LI64 71 aa5.22□□□□□ -1.57
LETMD1-216ENST00000548401 KRTAP12-4P60329 112 aa5.2□□□□□ -1.58
LETMD1-216ENST00000548401 KRTAP20-2Q3LI61 65 aa5.19□□□□□ -1.58
LETMD1-216ENST00000548401 KRTAP4-11Q9BYQ6 195 aa5.15□□□□□ -1.59
LETMD1-216ENST00000548401 SYNE1Q8NF91 8797 aaKnown RBP5.11□□□□□ -1.59
LETMD1-216ENST00000548401 KRTAP5-3Q6L8H2 238 aa5.04□□□□□ -1.6
LETMD1-216ENST00000548401 KRTAP5-2Q701N4 177 aa4.95□□□□□ -1.62
LETMD1-216ENST00000548401 AHNAK2Q8IVF2 5795 aa4.89□□□□□ -1.63
LETMD1-216ENST00000548401 KRTAP6-2Q3LI66 62 aa4.88□□□□□ -1.63
LETMD1-216ENST00000548401 KRTAP5-10Q6L8G5 202 aa4.84□□□□□ -1.63
LETMD1-216ENST00000548401 MT3P25713 68 aa4.75□□□□□ -1.65
LETMD1-216ENST00000548401 LUZP6Q538Z0 58 aa4.66□□□□□ -1.66
LETMD1-216ENST00000548401 KRTAP5-7Q6L8G8 165 aa4.57□□□□□ -1.68
LETMD1-216ENST00000548401 KRTAP5-8O75690 187 aa4.47□□□□□ -1.69
LETMD1-216ENST00000548401 OBSCNQ5VST9 7968 aa4.37□□□□□ -1.71
LETMD1-216ENST00000548401 KRTAP5-1Q6L8H4 278 aa4.35□□□□□ -1.71
LETMD1-216ENST00000548401 LCE1EQ5T753 118 aa4.29□□□□□ -1.72
LETMD1-216ENST00000548401 NDUFAF8A1L188 74 aa4.25□□□□□ -1.73
LETMD1-216ENST00000548401 LCE3DQ9BYE3 92 aa4.22□□□□□ -1.73
LETMD1-216ENST00000548401 MUC5ACP98088 5654 aa4.12□□□□□ -1.75
LETMD1-216ENST00000548401 AHNAKQ09666 5890 aaKnown RBP4.1□□□□□ -1.75
LETMD1-216ENST00000548401 LCE3EQ5T5B0 92 aa4.04□□□□□ -1.76
LETMD1-216ENST00000548401 LCE1CQ5T751 118 aa3.98□□□□□ -1.77
LETMD1-216ENST00000548401 LCE1BQ5T7P3 118 aa3.98□□□□□ -1.77
LETMD1-216ENST00000548401 MUC5BQ9HC84 5762 aaPredicted RBP3.92□□□□□ -1.78
LETMD1-216ENST00000548401 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.71□□□□□ -1.82
LETMD1-216ENST00000548401 LCE1FQ5T754 118 aa3.68□□□□□ -1.82
LETMD1-216ENST00000548401 KRTAP5-11Q6L8G4 156 aa3.6□□□□□ -1.83
LETMD1-216ENST00000548401 KRTAP21-2Q3LI59 83 aa3.44□□□□□ -1.86
LETMD1-216ENST00000548401 INE1O15225 51 aa3.43□□□□□ -1.86
LETMD1-216ENST00000548401 PRM1P04553 51 aa3.3□□□□□ -1.88
LETMD1-216ENST00000548401 PHGR1C9JFL3 82 aa3.08□□□□□ -1.92
LETMD1-216ENST00000548401 KRTAP4-4Q9BYR3 166 aa3.05□□□□□ -1.92
LETMD1-216ENST00000548401 MUC19Q7Z5P9 8384 aa2.66□□□□□ -1.98
LETMD1-216ENST00000548401 KRTAP21-1Q3LI58 79 aa2.08□□□□□ -2.08
LETMD1-216ENST00000548401 MUC16Q8WXI7 14507 aa1.96□□□□□ -2.1
Retrieved 78 of 20,778 RNA–protein pairs in 20.3 ms