RNA–Protein interactions for RNA: ENST00000548263.5

CALCOCO1-210, Transcript of calcium binding and coiled-coil domain 1, humanhuman

TSL 1 (best) BASIC

Gene CALCOCO1, Length 3,888 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO1-210ENST00000548263 KRTAP9-2Q9BYQ4 174 aa3.26□□□□□ -1.89
CALCOCO1-210ENST00000548263 MACF1Q9UPN3 7388 aaKnown RBP3.2□□□□□ -1.9
CALCOCO1-210ENST00000548263 KRTAP19-4Q3LI73 84 aa3.19□□□□□ -1.9
CALCOCO1-210ENST00000548263 KRTAP9-6A0A140TA67 174 aa3.18□□□□□ -1.9
CALCOCO1-210ENST00000548263 KRTAP9-6A8MVA2 160 aa3.18□□□□□ -1.9
CALCOCO1-210ENST00000548263 KRTAP4-3Q9BYR4 195 aa3.18□□□□□ -1.9
CALCOCO1-210ENST00000548263 MT1GP13640 62 aa3.17□□□□□ -1.9
CALCOCO1-210ENST00000548263 MT1LQ93083 61 aa3.17□□□□□ -1.9
CALCOCO1-210ENST00000548263 KRTAP19-7Q3SYF9 63 aa3.15□□□□□ -1.9
CALCOCO1-210ENST00000548263 KRTAP12-4P60329 112 aa3.15□□□□□ -1.91
CALCOCO1-210ENST00000548263 MT1EP04732 61 aa3.14□□□□□ -1.91
CALCOCO1-210ENST00000548263 KRTAP19-6Q3LI70 58 aa3.13□□□□□ -1.91
CALCOCO1-210ENST00000548263 LOC100996750A0A140TA64 210 aa3.12□□□□□ -1.91
CALCOCO1-210ENST00000548263 KRTAP2-3P0C7H8 128 aa3.09□□□□□ -1.91
CALCOCO1-210ENST00000548263 KRTAP2-4Q9BYR9 128 aa3.09□□□□□ -1.91
CALCOCO1-210ENST00000548263 KRTAP2-1Q9BYU5 128 aa3.09□□□□□ -1.91
CALCOCO1-210ENST00000548263 MDN1Q9NU22 5596 aa3.06□□□□□ -1.92
CALCOCO1-210ENST00000548263 LCE3BQ5TA77 95 aa3.06□□□□□ -1.92
CALCOCO1-210ENST00000548263 SPRR2EP22531 72 aa3.04□□□□□ -1.92
CALCOCO1-210ENST00000548263 SPRR2BP35325 72 aa3.04□□□□□ -1.92
CALCOCO1-210ENST00000548263 SPRR2AP35326 72 aa3.04□□□□□ -1.92
CALCOCO1-210ENST00000548263 KRTAP19-3Q7Z4W3 81 aa3.03□□□□□ -1.92
CALCOCO1-210ENST00000548263 MT1MQ8N339 61 aa2.98□□□□□ -1.93
CALCOCO1-210ENST00000548263 KRTAP9-7A8MTY7 169 aa2.93□□□□□ -1.94
CALCOCO1-210ENST00000548263 SPRR2DP22532 72 aa2.9□□□□□ -1.95
CALCOCO1-210ENST00000548263 LCE3DQ9BYE3 92 aa2.9□□□□□ -1.95
CALCOCO1-210ENST00000548263 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.88□□□□□ -1.95
CALCOCO1-210ENST00000548263 KRTAP4-9Q9BYQ8 210 aa2.88□□□□□ -1.95
CALCOCO1-210ENST00000548263 LCE3EQ5T5B0 92 aa2.86□□□□□ -1.95
CALCOCO1-210ENST00000548263 KRTAP5-9P26371 169 aa2.83□□□□□ -1.96
CALCOCO1-210ENST00000548263 LCE5AQ5TCM9 118 aa2.79□□□□□ -1.96
CALCOCO1-210ENST00000548263 LCE1AQ5T7P2 110 aa2.78□□□□□ -1.96
CALCOCO1-210ENST00000548263 PRM1P04553 51 aa2.77□□□□□ -1.97
CALCOCO1-210ENST00000548263 KRTAP6-3Q3LI67 103 aa2.76□□□□□ -1.97
CALCOCO1-210ENST00000548263 NEBP20929 6669 aa2.73□□□□□ -1.97
CALCOCO1-210ENST00000548263 KRTAP6-1Q3LI64 71 aa2.71□□□□□ -1.97
CALCOCO1-210ENST00000548263 MT4P47944 62 aa2.71□□□□□ -1.98
CALCOCO1-210ENST00000548263 KRTAP20-1Q3LI63 56 aa2.71□□□□□ -1.98
CALCOCO1-210ENST00000548263 KRTAP2-2Q9BYT5 123 aa2.71□□□□□ -1.98
CALCOCO1-210ENST00000548263 MT1AP04731 61 aa2.69□□□□□ -1.98
CALCOCO1-210ENST00000548263 MT3P25713 68 aa2.58□□□□□ -2
CALCOCO1-210ENST00000548263 KRTAP6-2Q3LI66 62 aa2.56□□□□□ -2
CALCOCO1-210ENST00000548263 KRTAP9-4Q9BYQ2 154 aa2.5□□□□□ -2.01
CALCOCO1-210ENST00000548263 KRTAP4-6Q9BYQ5 205 aa2.5□□□□□ -2.01
CALCOCO1-210ENST00000548263 KRTAP5-5Q701N2 237 aaPredicted RBP2.43□□□□□ -2.02
CALCOCO1-210ENST00000548263 LCE1DQ5T752 114 aa2.42□□□□□ -2.02
CALCOCO1-210ENST00000548263 GPR98Q8WXG9 6306 aa2.42□□□□□ -2.02
CALCOCO1-210ENST00000548263 LCE1EQ5T753 118 aa2.38□□□□□ -2.03
CALCOCO1-210ENST00000548263 LCE1BQ5T7P3 118 aa2.38□□□□□ -2.03
CALCOCO1-210ENST00000548263 KRTAP5-4Q6L8H1 288 aa2.37□□□□□ -2.03
CALCOCO1-210ENST00000548263 HMCN1Q96RW7 5635 aa2.31□□□□□ -2.04
CALCOCO1-210ENST00000548263 MUC19Q7Z5P9 8384 aa2.3□□□□□ -2.04
CALCOCO1-210ENST00000548263 LCE4AQ5TA78 99 aa2.28□□□□□ -2.04
CALCOCO1-210ENST00000548263 KRTAP20-2Q3LI61 65 aa2.24□□□□□ -2.05
CALCOCO1-210ENST00000548263 MUC5ACP98088 5654 aa2.2□□□□□ -2.06
CALCOCO1-210ENST00000548263 LCE1FQ5T754 118 aa2.18□□□□□ -2.06
CALCOCO1-210ENST00000548263 KRTAP5-3Q6L8H2 238 aa2.15□□□□□ -2.07
CALCOCO1-210ENST00000548263 KRTAP5-2Q701N4 177 aa2.13□□□□□ -2.07
CALCOCO1-210ENST00000548263 AHNAK2Q8IVF2 5795 aa2.12□□□□□ -2.07
CALCOCO1-210ENST00000548263 KRTAP4-11Q9BYQ6 195 aa2.1□□□□□ -2.07
CALCOCO1-210ENST00000548263 KRTAP5-10Q6L8G5 202 aa2.04□□□□□ -2.08
CALCOCO1-210ENST00000548263 KRTAP9-9Q9BYP9 154 aa2.04□□□□□ -2.08
CALCOCO1-210ENST00000548263 KRTAP4-12Q9BQ66 201 aa2.02□□□□□ -2.09
CALCOCO1-210ENST00000548263 MUC5BQ9HC84 5762 aaPredicted RBP1.93□□□□□ -2.1
CALCOCO1-210ENST00000548263 KRTAP4-2Q9BYR5 136 aa1.93□□□□□ -2.1
CALCOCO1-210ENST00000548263 KRTAP5-7Q6L8G8 165 aa1.92□□□□□ -2.1
CALCOCO1-210ENST00000548263 KRTAP4-4Q9BYR3 166 aa1.92□□□□□ -2.1
CALCOCO1-210ENST00000548263 KRTAP5-8O75690 187 aa1.87□□□□□ -2.11
CALCOCO1-210ENST00000548263 KRTAP5-1Q6L8H4 278 aa1.85□□□□□ -2.11
CALCOCO1-210ENST00000548263 LCE1CQ5T751 118 aa1.8□□□□□ -2.12
CALCOCO1-210ENST00000548263 AHNAKQ09666 5890 aaKnown RBP1.74□□□□□ -2.13
CALCOCO1-210ENST00000548263 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.62□□□□□ -2.15
CALCOCO1-210ENST00000548263 KRTAP21-1Q3LI58 79 aa1.6□□□□□ -2.15
CALCOCO1-210ENST00000548263 KRTAP21-2Q3LI59 83 aa1.6□□□□□ -2.15
CALCOCO1-210ENST00000548263 KRTAP5-11Q6L8G4 156 aa1.48□□□□□ -2.17
CALCOCO1-210ENST00000548263 PHGR1C9JFL3 82 aa1.39□□□□□ -2.19
CALCOCO1-210ENST00000548263 MUC16Q8WXI7 14507 aa0.91□□□□□ -2.26
Retrieved 77 of 20,778 RNA–protein pairs in 10.7 ms