RNA–Protein interactions for RNA: ENST00000547068.5

NPAS3-205, Transcript of neuronal PAS domain protein 3, humanhuman

TSL 1 (best) BASIC

Gene NPAS3, Length 2,531 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-205ENST00000547068 LCE3BQ5TA77 95 aa3.83□□□□□ -1.8
NPAS3-205ENST00000547068 KRTAP2-3P0C7H8 128 aa3.82□□□□□ -1.8
NPAS3-205ENST00000547068 KRTAP2-4Q9BYR9 128 aa3.82□□□□□ -1.8
NPAS3-205ENST00000547068 KRTAP2-1Q9BYU5 128 aa3.82□□□□□ -1.8
NPAS3-205ENST00000547068 KRTAP4-8A0A0G2JLE6 195 aa3.8□□□□□ -1.8
NPAS3-205ENST00000547068 KRTAP9-7A8MTY7 169 aa3.79□□□□□ -1.8
NPAS3-205ENST00000547068 KRTAP4-7Q9BYR0 210 aa3.77□□□□□ -1.81
NPAS3-205ENST00000547068 KRTAP9-9Q9BYP9 154 aa3.74□□□□□ -1.81
NPAS3-205ENST00000547068 KRTAP9-4Q9BYQ2 154 aa3.74□□□□□ -1.81
NPAS3-205ENST00000547068 KMT2DO14686 5537 aa3.73□□□□□ -1.81
NPAS3-205ENST00000547068 MACF1Q9UPN3 7388 aaKnown RBP3.71□□□□□ -1.82
NPAS3-205ENST00000547068 SYNE2Q8WXH0 6885 aaKnown RBP3.69□□□□□ -1.82
NPAS3-205ENST00000547068 KRTAP19-7Q3SYF9 63 aa3.61□□□□□ -1.83
NPAS3-205ENST00000547068 LCE1DQ5T752 114 aa3.61□□□□□ -1.83
NPAS3-205ENST00000547068 KRTAP19-4Q3LI73 84 aa3.58□□□□□ -1.84
NPAS3-205ENST00000547068 MT1LQ93083 61 aa3.54□□□□□ -1.84
NPAS3-205ENST00000547068 KRTAP4-2Q9BYR5 136 aa3.54□□□□□ -1.84
NPAS3-205ENST00000547068 MUC12Q9UKN1 5478 aa3.54□□□□□ -1.84
NPAS3-205ENST00000547068 KRTAP6-3Q3LI67 103 aa3.53□□□□□ -1.84
NPAS3-205ENST00000547068 HMCN1Q96RW7 5635 aa3.52□□□□□ -1.85
NPAS3-205ENST00000547068 SPRR2FQ96RM1 72 aa3.51□□□□□ -1.85
NPAS3-205ENST00000547068 KRTAP4-9Q9BYQ8 210 aa3.51□□□□□ -1.85
NPAS3-205ENST00000547068 KRTAP5-9P26371 169 aa3.5□□□□□ -1.85
NPAS3-205ENST00000547068 MT1EP04732 61 aa3.48□□□□□ -1.85
NPAS3-205ENST00000547068 KRTAP12-4P60329 112 aa3.48□□□□□ -1.85
NPAS3-205ENST00000547068 MDN1Q9NU22 5596 aa3.47□□□□□ -1.85
NPAS3-205ENST00000547068 SPRR2EP22531 72 aa3.38□□□□□ -1.87
NPAS3-205ENST00000547068 SPRR2BP35325 72 aa3.38□□□□□ -1.87
NPAS3-205ENST00000547068 SPRR2AP35326 72 aa3.38□□□□□ -1.87
NPAS3-205ENST00000547068 KRTAP4-11Q9BYQ6 195 aa3.37□□□□□ -1.87
NPAS3-205ENST00000547068 MT1GP13640 62 aa3.36□□□□□ -1.87
NPAS3-205ENST00000547068 LCE4AQ5TA78 99 aa3.36□□□□□ -1.87
NPAS3-205ENST00000547068 KRTAP4-3Q9BYR4 195 aa3.36□□□□□ -1.87
NPAS3-205ENST00000547068 LCE1AQ5T7P2 110 aa3.35□□□□□ -1.87
NPAS3-205ENST00000547068 KRTAP19-3Q7Z4W3 81 aa3.35□□□□□ -1.87
NPAS3-205ENST00000547068 LCE5AQ5TCM9 118 aa3.3□□□□□ -1.88
NPAS3-205ENST00000547068 KRTAP20-1Q3LI63 56 aa3.29□□□□□ -1.88
NPAS3-205ENST00000547068 NEBP20929 6669 aa3.29□□□□□ -1.88
NPAS3-205ENST00000547068 SPRR2DP22532 72 aa3.26□□□□□ -1.89
NPAS3-205ENST00000547068 MT1MQ8N339 61 aa3.25□□□□□ -1.89
NPAS3-205ENST00000547068 DSTQ03001 7570 aaKnown RBP3.22□□□□□ -1.89
NPAS3-205ENST00000547068 GPR98Q8WXG9 6306 aa3.2□□□□□ -1.9
NPAS3-205ENST00000547068 MT1AP04731 61 aa3.14□□□□□ -1.91
NPAS3-205ENST00000547068 PRM1P04553 51 aa3.13□□□□□ -1.91
NPAS3-205ENST00000547068 LCE3DQ9BYE3 92 aa3.11□□□□□ -1.91
NPAS3-205ENST00000547068 LCE3EQ5T5B0 92 aa3.1□□□□□ -1.91
NPAS3-205ENST00000547068 SYNE1Q8NF91 8797 aaKnown RBP3.09□□□□□ -1.91
NPAS3-205ENST00000547068 KRTAP5-5Q701N2 237 aaPredicted RBP3.09□□□□□ -1.92
NPAS3-205ENST00000547068 KRTAP2-2Q9BYT5 123 aa3.07□□□□□ -1.92
NPAS3-205ENST00000547068 KRTAP6-1Q3LI64 71 aa3.02□□□□□ -1.93
NPAS3-205ENST00000547068 KRTAP6-2Q3LI66 62 aa2.92□□□□□ -1.94
NPAS3-205ENST00000547068 MUC5BQ9HC84 5762 aaPredicted RBP2.88□□□□□ -1.95
NPAS3-205ENST00000547068 KRTAP5-4Q6L8H1 288 aa2.88□□□□□ -1.95
NPAS3-205ENST00000547068 MT4P47944 62 aa2.83□□□□□ -1.96
NPAS3-205ENST00000547068 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.82□□□□□ -1.96
NPAS3-205ENST00000547068 KRTAP20-2Q3LI61 65 aa2.71□□□□□ -1.98
NPAS3-205ENST00000547068 OBSCNQ5VST9 7968 aa2.68□□□□□ -1.98
NPAS3-205ENST00000547068 KRTAP5-7Q6L8G8 165 aa2.67□□□□□ -1.98
NPAS3-205ENST00000547068 MT3P25713 68 aa2.65□□□□□ -1.99
NPAS3-205ENST00000547068 AHNAK2Q8IVF2 5795 aa2.62□□□□□ -1.99
NPAS3-205ENST00000547068 KRTAP5-10Q6L8G5 202 aa2.61□□□□□ -1.99
NPAS3-205ENST00000547068 LCE1EQ5T753 118 aa2.59□□□□□ -1.99
NPAS3-205ENST00000547068 KRTAP5-2Q701N4 177 aa2.58□□□□□ -2
NPAS3-205ENST00000547068 AHNAKQ09666 5890 aaKnown RBP2.5□□□□□ -2.01
NPAS3-205ENST00000547068 KRTAP4-4Q9BYR3 166 aa2.37□□□□□ -2.03
NPAS3-205ENST00000547068 KRTAP5-8O75690 187 aa2.29□□□□□ -2.04
NPAS3-205ENST00000547068 MUC5ACP98088 5654 aa2.25□□□□□ -2.05
NPAS3-205ENST00000547068 KRTAP5-1Q6L8H4 278 aa2.25□□□□□ -2.05
NPAS3-205ENST00000547068 KRTAP5-11Q6L8G4 156 aa2.24□□□□□ -2.05
NPAS3-205ENST00000547068 LCE1BQ5T7P3 118 aa2.17□□□□□ -2.06
NPAS3-205ENST00000547068 LCE1CQ5T751 118 aa2.14□□□□□ -2.07
NPAS3-205ENST00000547068 LCE1FQ5T754 118 aa2.02□□□□□ -2.09
NPAS3-205ENST00000547068 KRTAP21-1Q3LI58 79 aa1.98□□□□□ -2.09
NPAS3-205ENST00000547068 KRTAP21-2Q3LI59 83 aa1.92□□□□□ -2.1
NPAS3-205ENST00000547068 MUC19Q7Z5P9 8384 aa1.86□□□□□ -2.11
NPAS3-205ENST00000547068 PHGR1C9JFL3 82 aa1.62□□□□□ -2.15
NPAS3-205ENST00000547068 MUC16Q8WXI7 14507 aa1.07□□□□□ -2.24
Retrieved 77 of 20,778 RNA–protein pairs in 11.6 ms