RNA–Protein interactions for RNA: ENST00000545368.5

CDCA3-210, Transcript of cell division cycle associated 3, humanhuman

TSL 3

Gene CDCA3, Length 619 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-210ENST00000545368 KRTAP19-5Q3LI72 72 aa4.84□□□□□ -1.63
CDCA3-210ENST00000545368 KRTAP19-7Q3SYF9 63 aa4.84□□□□□ -1.63
CDCA3-210ENST00000545368 MUC12Q9UKN1 5478 aa4.82□□□□□ -1.64
CDCA3-210ENST00000545368 PMAIP1Q13794 54 aa4.81□□□□□ -1.64
CDCA3-210ENST00000545368 PRO0628Q9UI54 55 aa4.81□□□□□ -1.64
CDCA3-210ENST00000545368 SPRR2EP22531 72 aa4.8□□□□□ -1.64
CDCA3-210ENST00000545368 SPRR2BP35325 72 aa4.8□□□□□ -1.64
CDCA3-210ENST00000545368 SPRR2AP35326 72 aa4.8□□□□□ -1.64
CDCA3-210ENST00000545368 MT1EP04732 61 aa4.79□□□□□ -1.64
CDCA3-210ENST00000545368 NEBP20929 6669 aa4.79□□□□□ -1.64
CDCA3-210ENST00000545368 PP632Q6XCG6 107 aa4.78□□□□□ -1.64
CDCA3-210ENST00000545368 MDN1Q9NU22 5596 aa4.77□□□□□ -1.65
CDCA3-210ENST00000545368 KRTAP12-3P60328 96 aa4.75□□□□□ -1.65
CDCA3-210ENST00000545368 LCE1AQ5T7P2 110 aa4.75□□□□□ -1.65
CDCA3-210ENST00000545368 KRTAP19-3Q7Z4W3 81 aa4.69□□□□□ -1.66
CDCA3-210ENST00000545368 LCE3BQ5TA77 95 aa4.68□□□□□ -1.66
CDCA3-210ENST00000545368 MT1LQ93083 61 aa4.65□□□□□ -1.67
CDCA3-210ENST00000545368 SPRR2DP22532 72 aa4.63□□□□□ -1.67
CDCA3-210ENST00000545368 LCE5AQ5TCM9 118 aa4.63□□□□□ -1.67
CDCA3-210ENST00000545368 MT1GP13640 62 aa4.61□□□□□ -1.67
CDCA3-210ENST00000545368 MT1MQ8N339 61 aa4.54□□□□□ -1.68
CDCA3-210ENST00000545368 KRTAP20-1Q3LI63 56 aa4.53□□□□□ -1.68
CDCA3-210ENST00000545368 KTN1-AS1Q86SY8 53 aa4.51□□□□□ -1.69
CDCA3-210ENST00000545368 KRTAP2-3P0C7H8 128 aa4.5□□□□□ -1.69
CDCA3-210ENST00000545368 KRTAP2-4Q9BYR9 128 aa4.5□□□□□ -1.69
CDCA3-210ENST00000545368 KRTAP4-7Q9BYR0 210 aa4.42□□□□□ -1.7
CDCA3-210ENST00000545368 NDUFAF8A1L188 74 aa4.4□□□□□ -1.71
CDCA3-210ENST00000545368 LCE3CQ5T5A8 94 aa4.4□□□□□ -1.71
CDCA3-210ENST00000545368 LCE1DQ5T752 114 aa4.4□□□□□ -1.71
CDCA3-210ENST00000545368 KRTAP4-3Q9BYR4 195 aa4.39□□□□□ -1.71
CDCA3-210ENST00000545368 KRTAP2-2Q9BYT5 123 aa4.39□□□□□ -1.71
CDCA3-210ENST00000545368 KRTAP2-1Q9BYU5 128 aa4.39□□□□□ -1.71
CDCA3-210ENST00000545368 DSTQ03001 7570 aaKnown RBP4.39□□□□□ -1.71
CDCA3-210ENST00000545368 KRTAP4-9Q9BYQ8 210 aa4.19□□□□□ -1.74
CDCA3-210ENST00000545368 KRTAP4-11Q9BYQ6 195 aa4.14□□□□□ -1.75
CDCA3-210ENST00000545368 KRTAP9-6A8MVA2 160 aa4.11□□□□□ -1.75
CDCA3-210ENST00000545368 KRTAP5-5Q701N2 237 aaPredicted RBP4.1□□□□□ -1.75
CDCA3-210ENST00000545368 MT3P25713 68 aa4.09□□□□□ -1.75
CDCA3-210ENST00000545368 KRTAP5-4Q6L8H1 288 aa4.08□□□□□ -1.76
CDCA3-210ENST00000545368 SPRR5A0A1B0GTR4 108 aa4.03□□□□□ -1.76
CDCA3-210ENST00000545368 MT4P47944 62 aa4.01□□□□□ -1.77
CDCA3-210ENST00000545368 MT1AP04731 61 aa3.97□□□□□ -1.77
CDCA3-210ENST00000545368 KRTAP12-4P60329 112 aa3.94□□□□□ -1.78
CDCA3-210ENST00000545368 KRTAP4-2Q9BYR5 136 aa3.93□□□□□ -1.78
CDCA3-210ENST00000545368 KRTAP6-1Q3LI64 71 aa3.9□□□□□ -1.79
CDCA3-210ENST00000545368 HMCN1Q96RW7 5635 aa3.9□□□□□ -1.79
CDCA3-210ENST00000545368 SYNE1Q8NF91 8797 aaKnown RBP3.89□□□□□ -1.79
CDCA3-210ENST00000545368 KRTAP20-2Q3LI61 65 aa3.84□□□□□ -1.79
CDCA3-210ENST00000545368 LUZP6Q538Z0 58 aa3.81□□□□□ -1.8
CDCA3-210ENST00000545368 LCE1FQ5T754 118 aa3.78□□□□□ -1.8
CDCA3-210ENST00000545368 KRTAP5-3Q6L8H2 238 aa3.69□□□□□ -1.82
CDCA3-210ENST00000545368 KRTAP6-2Q3LI66 62 aa3.66□□□□□ -1.82
CDCA3-210ENST00000545368 KRTAP5-2Q701N4 177 aa3.64□□□□□ -1.83
CDCA3-210ENST00000545368 AHNAK2Q8IVF2 5795 aa3.6□□□□□ -1.83
CDCA3-210ENST00000545368 GPR98Q8WXG9 6306 aa3.55□□□□□ -1.84
CDCA3-210ENST00000545368 KRTAP5-10Q6L8G5 202 aa3.5□□□□□ -1.85
CDCA3-210ENST00000545368 OBSCNQ5VST9 7968 aa3.33□□□□□ -1.88
CDCA3-210ENST00000545368 KRTAP5-7Q6L8G8 165 aa3.32□□□□□ -1.88
CDCA3-210ENST00000545368 KRTAP5-8O75690 187 aa3.27□□□□□ -1.89
CDCA3-210ENST00000545368 LCE3DQ9BYE3 92 aa3.26□□□□□ -1.89
CDCA3-210ENST00000545368 LCE1EQ5T753 118 aa3.22□□□□□ -1.89
CDCA3-210ENST00000545368 LCE3EQ5T5B0 92 aa3.19□□□□□ -1.9
CDCA3-210ENST00000545368 KRTAP5-1Q6L8H4 278 aa3.19□□□□□ -1.9
CDCA3-210ENST00000545368 MUC5ACP98088 5654 aa3.08□□□□□ -1.92
CDCA3-210ENST00000545368 LCE1BQ5T7P3 118 aa3.01□□□□□ -1.93
CDCA3-210ENST00000545368 LCE1CQ5T751 118 aa2.99□□□□□ -1.93
CDCA3-210ENST00000545368 MUC5BQ9HC84 5762 aaPredicted RBP2.93□□□□□ -1.94
CDCA3-210ENST00000545368 AHNAKQ09666 5890 aaKnown RBP2.86□□□□□ -1.95
CDCA3-210ENST00000545368 INE1O15225 51 aa2.84□□□□□ -1.95
CDCA3-210ENST00000545368 KRTAP5-11Q6L8G4 156 aa2.79□□□□□ -1.96
CDCA3-210ENST00000545368 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.76□□□□□ -1.97
CDCA3-210ENST00000545368 PRM1P04553 51 aa2.57□□□□□ -2
CDCA3-210ENST00000545368 KRTAP21-2Q3LI59 83 aa2.55□□□□□ -2
CDCA3-210ENST00000545368 KRTAP4-4Q9BYR3 166 aa2.29□□□□□ -2.04
CDCA3-210ENST00000545368 PHGR1C9JFL3 82 aa2.28□□□□□ -2.04
CDCA3-210ENST00000545368 MUC19Q7Z5P9 8384 aa1.99□□□□□ -2.09
CDCA3-210ENST00000545368 KRTAP21-1Q3LI58 79 aa1.55□□□□□ -2.16
CDCA3-210ENST00000545368 MUC16Q8WXI7 14507 aa1.49□□□□□ -2.17
Retrieved 78 of 20,778 RNA–protein pairs in 261.5 ms