RNA–Protein interactions for RNA: ENST00000545354.1

UBE4A-203, Transcript of ubiquitination factor E4A, humanhuman

TSL 2 BASIC

Gene UBE4A, Length 2,149 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4A-203ENST00000545354 M0R2T5 61 aa1.94□□□□□ -2.1
UBE4A-203ENST00000545354 KRTAP8-1Q8IUC2 63 aa1.91□□□□□ -2.1
UBE4A-203ENST00000545354 KRTAP9-6A8MVA2 160 aa1.91□□□□□ -2.1
UBE4A-203ENST00000545354 KRTAP12-4P60329 112 aa1.88□□□□□ -2.11
UBE4A-203ENST00000545354 SYNE2Q8WXH0 6885 aaKnown RBP1.88□□□□□ -2.11
UBE4A-203ENST00000545354 KRTAP2-3P0C7H8 128 aa1.87□□□□□ -2.11
UBE4A-203ENST00000545354 KRTAP2-4Q9BYR9 128 aa1.87□□□□□ -2.11
UBE4A-203ENST00000545354 KRTAP2-1Q9BYU5 128 aa1.87□□□□□ -2.11
UBE4A-203ENST00000545354 KRTAP5-1Q6L8H4 278 aa1.87□□□□□ -2.11
UBE4A-203ENST00000545354 MUC17Q685J3 4493 aa1.86□□□□□ -2.11
UBE4A-203ENST00000545354 KRTAP6-3Q3LI67 103 aa1.86□□□□□ -2.11
UBE4A-203ENST00000545354 LCE3CQ5T5A8 94 aa1.86□□□□□ -2.11
UBE4A-203ENST00000545354 KRTAP5-4Q6L8H1 288 aa1.85□□□□□ -2.11
UBE4A-203ENST00000545354 SSPOA2VEC9 5147 aa1.85□□□□□ -2.11
UBE4A-203ENST00000545354 USH2AO75445 5202 aa1.84□□□□□ -2.11
UBE4A-203ENST00000545354 FCGBPQ9Y6R7 5405 aaPredicted RBP1.84□□□□□ -2.11
UBE4A-203ENST00000545354 MACF1Q9UPN3 7388 aaKnown RBP1.83□□□□□ -2.12
UBE4A-203ENST00000545354 LCE3AQ5TA76 89 aa1.81□□□□□ -2.12
UBE4A-203ENST00000545354 KRTAP12-3P60328 96 aa1.8□□□□□ -2.12
UBE4A-203ENST00000545354 GPR98Q8WXG9 6306 aa1.79□□□□□ -2.12
UBE4A-203ENST00000545354 KRTAP4-1Q9BYQ7 146 aa1.79□□□□□ -2.12
UBE4A-203ENST00000545354 KRTAP4-4Q9BYR3 166 aa1.78□□□□□ -2.12
UBE4A-203ENST00000545354 NEBP20929 6669 aa1.78□□□□□ -2.13
UBE4A-203ENST00000545354 MT1HP80294 61 aa1.77□□□□□ -2.13
UBE4A-203ENST00000545354 KRTAP19-2Q3LHN2 52 aa1.76□□□□□ -2.13
UBE4A-203ENST00000545354 KRTAP20-1Q3LI63 56 aa1.75□□□□□ -2.13
UBE4A-203ENST00000545354 FLGP20930 4061 aaPredicted RBP1.75□□□□□ -2.13
UBE4A-203ENST00000545354 MUC12Q9UKN1 5478 aa1.71□□□□□ -2.14
UBE4A-203ENST00000545354 LCE3EQ5T5B0 92 aa1.69□□□□□ -2.14
UBE4A-203ENST00000545354 KMT2DO14686 5537 aa1.67□□□□□ -2.14
UBE4A-203ENST00000545354 KRTAP5-2Q701N4 177 aa1.66□□□□□ -2.14
UBE4A-203ENST00000545354 MDN1Q9NU22 5596 aa1.64□□□□□ -2.15
UBE4A-203ENST00000545354 OBSCNQ5VST9 7968 aa1.64□□□□□ -2.15
UBE4A-203ENST00000545354 KRTAP19-6Q3LI70 58 aa1.61□□□□□ -2.15
UBE4A-203ENST00000545354 SPRR2GQ9BYE4 73 aa1.61□□□□□ -2.15
UBE4A-203ENST00000545354 KRTAP5-8O75690 187 aa1.6□□□□□ -2.15
UBE4A-203ENST00000545354 MT2AP02795 61 aa1.59□□□□□ -2.15
UBE4A-203ENST00000545354 MT1FP04733 61 aa1.58□□□□□ -2.16
UBE4A-203ENST00000545354 KRTAP4-3Q9BYR4 195 aa1.58□□□□□ -2.16
UBE4A-203ENST00000545354 KRTAP19-5Q3LI72 72 aa1.58□□□□□ -2.16
UBE4A-203ENST00000545354 PRM1P04553 51 aa1.57□□□□□ -2.16
UBE4A-203ENST00000545354 MT1AP04731 61 aa1.54□□□□□ -2.16
UBE4A-203ENST00000545354 MUC5BQ9HC84 5762 aaPredicted RBP1.53□□□□□ -2.16
UBE4A-203ENST00000545354 LCE3DQ9BYE3 92 aa1.52□□□□□ -2.17
UBE4A-203ENST00000545354 KRTAP5-5Q701N2 237 aaPredicted RBP1.5□□□□□ -2.17
UBE4A-203ENST00000545354 KRTAP5-7Q6L8G8 165 aa1.48□□□□□ -2.17
UBE4A-203ENST00000545354 DSTQ03001 7570 aaKnown RBP1.46□□□□□ -2.18
UBE4A-203ENST00000545354 SPRR2EP22531 72 aa1.45□□□□□ -2.18
UBE4A-203ENST00000545354 SPRR2BP35325 72 aa1.45□□□□□ -2.18
UBE4A-203ENST00000545354 SPRR2AP35326 72 aa1.45□□□□□ -2.18
UBE4A-203ENST00000545354 AHNAKQ09666 5890 aaKnown RBP1.44□□□□□ -2.18
UBE4A-203ENST00000545354 MT1EP04732 61 aa1.44□□□□□ -2.18
UBE4A-203ENST00000545354 KRTAP19-8Q3LI54 63 aa1.43□□□□□ -2.18
UBE4A-203ENST00000545354 MT1BP07438 61 aa1.43□□□□□ -2.18
UBE4A-203ENST00000545354 AHNAK2Q8IVF2 5795 aa1.42□□□□□ -2.18
UBE4A-203ENST00000545354 KRTAP5-10Q6L8G5 202 aa1.42□□□□□ -2.18
UBE4A-203ENST00000545354 SPRR2FQ96RM1 72 aa1.42□□□□□ -2.18
UBE4A-203ENST00000545354 LCE1CQ5T751 118 aa1.41□□□□□ -2.18
UBE4A-203ENST00000545354 LCE1BQ5T7P3 118 aa1.41□□□□□ -2.18
UBE4A-203ENST00000545354 SPRR2DP22532 72 aa1.4□□□□□ -2.18
UBE4A-203ENST00000545354 MT1XP80297 61 aa1.4□□□□□ -2.19
UBE4A-203ENST00000545354 MT1LQ93083 61 aa1.4□□□□□ -2.19
UBE4A-203ENST00000545354 KRTAP6-2Q3LI66 62 aa1.33□□□□□ -2.2
UBE4A-203ENST00000545354 MT4P47944 62 aa1.27□□□□□ -2.21
UBE4A-203ENST00000545354 SYNE1Q8NF91 8797 aaKnown RBP1.25□□□□□ -2.21
UBE4A-203ENST00000545354 KRTAP19-7Q3SYF9 63 aa1.23□□□□□ -2.21
UBE4A-203ENST00000545354 KRTAP19-3Q7Z4W3 81 aa1.23□□□□□ -2.21
UBE4A-203ENST00000545354 MUC5ACP98088 5654 aa1.22□□□□□ -2.21
UBE4A-203ENST00000545354 MUC19Q7Z5P9 8384 aa1.17□□□□□ -2.22
UBE4A-203ENST00000545354 MT1GP13640 62 aa1.16□□□□□ -2.22
UBE4A-203ENST00000545354 MT1MQ8N339 61 aa1.13□□□□□ -2.23
UBE4A-203ENST00000545354 KRTAP21-1Q3LI58 79 aa1.12□□□□□ -2.23
UBE4A-203ENST00000545354 KRTAP20-2Q3LI61 65 aa1.12□□□□□ -2.23
UBE4A-203ENST00000545354 KRTAP6-1Q3LI64 71 aa1.03□□□□□ -2.25
UBE4A-203ENST00000545354 KRTAP21-2Q3LI59 83 aa1.01□□□□□ -2.25
UBE4A-203ENST00000545354 PHGR1C9JFL3 82 aa0.82□□□□□ -2.28
UBE4A-203ENST00000545354 MUC16Q8WXI7 14507 aa0.53□□□□□ -2.32
Retrieved 77 of 20,778 RNA–protein pairs in 5.8 ms