RNA–Protein interactions for RNA: ENST00000545067.6

CCDC7-210, Transcript of coiled-coil domain containing 7, humanhuman

TSL 1 (best)

Gene CCDC7, Length 4,001 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-210ENST00000545067 SYNE1Q8NF91 8797 aaKnown RBP3.11□□□□□ -1.91
CCDC7-210ENST00000545067 FCGBPQ9Y6R7 5405 aaPredicted RBP3.07□□□□□ -1.92
CCDC7-210ENST00000545067 KRTAP9-6A0A140TA67 174 aa3.05□□□□□ -1.92
CCDC7-210ENST00000545067 KRTAP9-9Q9BYP9 154 aa3.03□□□□□ -1.93
CCDC7-210ENST00000545067 KRTAP9-4Q9BYQ2 154 aa3.03□□□□□ -1.93
CCDC7-210ENST00000545067 SPRR2FQ96RM1 72 aa2.98□□□□□ -1.93
CCDC7-210ENST00000545067 MT1GP13640 62 aa2.97□□□□□ -1.93
CCDC7-210ENST00000545067 KRTAP9-7A8MTY7 169 aa2.97□□□□□ -1.93
CCDC7-210ENST00000545067 KRTAP19-7Q3SYF9 63 aa2.96□□□□□ -1.94
CCDC7-210ENST00000545067 MUC12Q9UKN1 5478 aa2.96□□□□□ -1.94
CCDC7-210ENST00000545067 KRTAP4-3Q9BYR4 195 aa2.95□□□□□ -1.94
CCDC7-210ENST00000545067 KRTAP9-6A8MVA2 160 aa2.95□□□□□ -1.94
CCDC7-210ENST00000545067 MT1LQ93083 61 aa2.94□□□□□ -1.94
CCDC7-210ENST00000545067 LCE4AQ5TA78 99 aa2.93□□□□□ -1.94
CCDC7-210ENST00000545067 MT1EP04732 61 aa2.93□□□□□ -1.94
CCDC7-210ENST00000545067 SSPOA2VEC9 5147 aa2.91□□□□□ -1.94
CCDC7-210ENST00000545067 SYNE2Q8WXH0 6885 aaKnown RBP2.88□□□□□ -1.95
CCDC7-210ENST00000545067 LCE3BQ5TA77 95 aa2.85□□□□□ -1.95
CCDC7-210ENST00000545067 KRTAP12-4P60329 112 aa2.8□□□□□ -1.96
CCDC7-210ENST00000545067 KRTAP19-3Q7Z4W3 81 aa2.8□□□□□ -1.96
CCDC7-210ENST00000545067 KRTAP19-6Q3LI70 58 aa2.79□□□□□ -1.96
CCDC7-210ENST00000545067 MT1MQ8N339 61 aa2.77□□□□□ -1.97
CCDC7-210ENST00000545067 KRTAP19-4Q3LI73 84 aa2.76□□□□□ -1.97
CCDC7-210ENST00000545067 KRTAP4-9Q9BYQ8 210 aa2.75□□□□□ -1.97
CCDC7-210ENST00000545067 MACF1Q9UPN3 7388 aaKnown RBP2.74□□□□□ -1.97
CCDC7-210ENST00000545067 KRTAP2-3P0C7H8 128 aa2.73□□□□□ -1.97
CCDC7-210ENST00000545067 KRTAP2-4Q9BYR9 128 aa2.73□□□□□ -1.97
CCDC7-210ENST00000545067 KRTAP2-1Q9BYU5 128 aa2.73□□□□□ -1.97
CCDC7-210ENST00000545067 LCE1DQ5T752 114 aa2.73□□□□□ -1.97
CCDC7-210ENST00000545067 LCE5AQ5TCM9 118 aa2.72□□□□□ -1.97
CCDC7-210ENST00000545067 KRTAP4-2Q9BYR5 136 aa2.7□□□□□ -1.98
CCDC7-210ENST00000545067 SPRR2EP22531 72 aa2.68□□□□□ -1.98
CCDC7-210ENST00000545067 SPRR2BP35325 72 aa2.68□□□□□ -1.98
CCDC7-210ENST00000545067 SPRR2AP35326 72 aa2.68□□□□□ -1.98
CCDC7-210ENST00000545067 KRTAP4-11Q9BYQ6 195 aa2.65□□□□□ -1.98
CCDC7-210ENST00000545067 MDN1Q9NU22 5596 aa2.6□□□□□ -1.99
CCDC7-210ENST00000545067 LCE3DQ9BYE3 92 aa2.6□□□□□ -1.99
CCDC7-210ENST00000545067 SPRR2DP22532 72 aa2.55□□□□□ -2
CCDC7-210ENST00000545067 KRTAP6-1Q3LI64 71 aa2.55□□□□□ -2
CCDC7-210ENST00000545067 LCE3EQ5T5B0 92 aa2.54□□□□□ -2
CCDC7-210ENST00000545067 PRM1P04553 51 aa2.47□□□□□ -2.01
CCDC7-210ENST00000545067 MT1AP04731 61 aa2.46□□□□□ -2.01
CCDC7-210ENST00000545067 LCE1AQ5T7P2 110 aa2.46□□□□□ -2.01
CCDC7-210ENST00000545067 MT4P47944 62 aa2.38□□□□□ -2.03
CCDC7-210ENST00000545067 KRTAP6-2Q3LI66 62 aa2.36□□□□□ -2.03
CCDC7-210ENST00000545067 MT3P25713 68 aa2.35□□□□□ -2.03
CCDC7-210ENST00000545067 KRTAP5-9P26371 169 aa2.25□□□□□ -2.05
CCDC7-210ENST00000545067 KRTAP5-3Q6L8H2 238 aa2.23□□□□□ -2.05
CCDC7-210ENST00000545067 KRTAP6-3Q3LI67 103 aa2.2□□□□□ -2.06
CCDC7-210ENST00000545067 LCE1BQ5T7P3 118 aa2.19□□□□□ -2.06
CCDC7-210ENST00000545067 KRTAP5-5Q701N2 237 aaPredicted RBP2.19□□□□□ -2.06
CCDC7-210ENST00000545067 NEBP20929 6669 aa2.12□□□□□ -2.07
CCDC7-210ENST00000545067 MUC19Q7Z5P9 8384 aa2.1□□□□□ -2.07
CCDC7-210ENST00000545067 KRTAP2-2Q9BYT5 123 aa2.06□□□□□ -2.08
CCDC7-210ENST00000545067 MUC5ACP98088 5654 aa1.99□□□□□ -2.09
CCDC7-210ENST00000545067 KRTAP20-2Q3LI61 65 aa1.99□□□□□ -2.09
CCDC7-210ENST00000545067 HMCN1Q96RW7 5635 aa1.97□□□□□ -2.09
CCDC7-210ENST00000545067 LCE1FQ5T754 118 aa1.94□□□□□ -2.1
CCDC7-210ENST00000545067 KRTAP20-1Q3LI63 56 aa1.93□□□□□ -2.1
CCDC7-210ENST00000545067 KRTAP5-11Q6L8G4 156 aa1.88□□□□□ -2.11
CCDC7-210ENST00000545067 KRTAP5-4Q6L8H1 288 aa1.88□□□□□ -2.11
CCDC7-210ENST00000545067 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.87□□□□□ -2.11
CCDC7-210ENST00000545067 LCE1EQ5T753 118 aa1.78□□□□□ -2.12
CCDC7-210ENST00000545067 KRTAP4-4Q9BYR3 166 aa1.77□□□□□ -2.13
CCDC7-210ENST00000545067 KRTAP5-2Q701N4 177 aa1.73□□□□□ -2.13
CCDC7-210ENST00000545067 MUC5BQ9HC84 5762 aaPredicted RBP1.72□□□□□ -2.13
CCDC7-210ENST00000545067 AHNAK2Q8IVF2 5795 aa1.67□□□□□ -2.14
CCDC7-210ENST00000545067 GPR98Q8WXG9 6306 aa1.67□□□□□ -2.14
CCDC7-210ENST00000545067 KRTAP5-10Q6L8G5 202 aa1.66□□□□□ -2.14
CCDC7-210ENST00000545067 LCE1CQ5T751 118 aa1.62□□□□□ -2.15
CCDC7-210ENST00000545067 KRTAP5-1Q6L8H4 278 aa1.56□□□□□ -2.16
CCDC7-210ENST00000545067 KRTAP5-8O75690 187 aa1.52□□□□□ -2.17
CCDC7-210ENST00000545067 KRTAP21-2Q3LI59 83 aa1.49□□□□□ -2.17
CCDC7-210ENST00000545067 AHNAKQ09666 5890 aaKnown RBP1.35□□□□□ -2.19
CCDC7-210ENST00000545067 KRTAP21-1Q3LI58 79 aa1.27□□□□□ -2.21
CCDC7-210ENST00000545067 KRTAP5-7Q6L8G8 165 aa1.24□□□□□ -2.21
CCDC7-210ENST00000545067 PHGR1C9JFL3 82 aa1.17□□□□□ -2.22
CCDC7-210ENST00000545067 MUC16Q8WXI7 14507 aa0.76□□□□□ -2.29
Retrieved 78 of 20,778 RNA–protein pairs in 68.5 ms