RNA–Protein interactions for RNA: ENST00000543162.1

DDB1-221, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 4

Gene DDB1, Length 575 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-221ENST00000543162 SYNE2Q8WXH0 6885 aaKnown RBP3.94□□□□□ -1.78
DDB1-221ENST00000543162 KRTAP9-7A8MTY7 169 aa3.92□□□□□ -1.78
DDB1-221ENST00000543162 MT1EP04732 61 aa3.91□□□□□ -1.78
DDB1-221ENST00000543162 KRTAP15-1Q3LI76 137 aa3.84□□□□□ -1.79
DDB1-221ENST00000543162 MT1LQ93083 61 aa3.81□□□□□ -1.8
DDB1-221ENST00000543162 SPRR2EP22531 72 aa3.8□□□□□ -1.8
DDB1-221ENST00000543162 SPRR2BP35325 72 aa3.8□□□□□ -1.8
DDB1-221ENST00000543162 SPRR2AP35326 72 aa3.8□□□□□ -1.8
DDB1-221ENST00000543162 LCE1AQ5T7P2 110 aa3.79□□□□□ -1.8
DDB1-221ENST00000543162 KRTAP19-3Q7Z4W3 81 aa3.79□□□□□ -1.8
DDB1-221ENST00000543162 MUC12Q9UKN1 5478 aa3.79□□□□□ -1.8
DDB1-221ENST00000543162 NDUFAF8A1L188 74 aa3.76□□□□□ -1.81
DDB1-221ENST00000543162 MT1GP13640 62 aa3.75□□□□□ -1.81
DDB1-221ENST00000543162 LCE5AQ5TCM9 118 aa3.74□□□□□ -1.81
DDB1-221ENST00000543162 KRTAP19-4Q3LI73 84 aa3.73□□□□□ -1.81
DDB1-221ENST00000543162 MDN1Q9NU22 5596 aa3.69□□□□□ -1.82
DDB1-221ENST00000543162 LCE3BQ5TA77 95 aa3.69□□□□□ -1.82
DDB1-221ENST00000543162 MT1MQ8N339 61 aa3.69□□□□□ -1.82
DDB1-221ENST00000543162 KRTAP4-12Q9BQ66 201 aa3.69□□□□□ -1.82
DDB1-221ENST00000543162 LCE3CQ5T5A8 94 aa3.68□□□□□ -1.82
DDB1-221ENST00000543162 SPRR2DP22532 72 aa3.67□□□□□ -1.82
DDB1-221ENST00000543162 KRTAP4-7Q9BYR0 210 aa3.66□□□□□ -1.82
DDB1-221ENST00000543162 NEBP20929 6669 aa3.66□□□□□ -1.82
DDB1-221ENST00000543162 KRTAP9-9Q9BYP9 154 aa3.64□□□□□ -1.83
DDB1-221ENST00000543162 KRTAP9-4Q9BYQ2 154 aa3.64□□□□□ -1.83
DDB1-221ENST00000543162 KRTAP4-3Q9BYR4 195 aa3.61□□□□□ -1.83
DDB1-221ENST00000543162 SPRR5A0A1B0GTR4 108 aa3.51□□□□□ -1.85
DDB1-221ENST00000543162 KRTAP2-3P0C7H8 128 aa3.5□□□□□ -1.85
DDB1-221ENST00000543162 KRTAP2-4Q9BYR9 128 aa3.5□□□□□ -1.85
DDB1-221ENST00000543162 KRTAP20-1Q3LI63 56 aa3.49□□□□□ -1.85
DDB1-221ENST00000543162 DSTQ03001 7570 aaKnown RBP3.47□□□□□ -1.85
DDB1-221ENST00000543162 LCE1DQ5T752 114 aa3.46□□□□□ -1.86
DDB1-221ENST00000543162 KRTAP9-6A8MVA2 160 aa3.45□□□□□ -1.86
DDB1-221ENST00000543162 KRTAP2-2Q9BYT5 123 aa3.42□□□□□ -1.86
DDB1-221ENST00000543162 KRTAP2-1Q9BYU5 128 aa3.42□□□□□ -1.86
DDB1-221ENST00000543162 KRTAP4-9Q9BYQ8 210 aa3.38□□□□□ -1.87
DDB1-221ENST00000543162 KRTAP4-2Q9BYR5 136 aa3.35□□□□□ -1.87
DDB1-221ENST00000543162 KRTAP5-5Q701N2 237 aaPredicted RBP3.33□□□□□ -1.88
DDB1-221ENST00000543162 KRTAP5-4Q6L8H1 288 aa3.26□□□□□ -1.89
DDB1-221ENST00000543162 MT1AP04731 61 aa3.25□□□□□ -1.89
DDB1-221ENST00000543162 LCE4AQ5TA78 99 aa3.25□□□□□ -1.89
DDB1-221ENST00000543162 KRTAP4-11Q9BYQ6 195 aa3.24□□□□□ -1.89
DDB1-221ENST00000543162 KRTAP6-1Q3LI64 71 aa3.2□□□□□ -1.9
DDB1-221ENST00000543162 INE1O15225 51 aa3.19□□□□□ -1.9
DDB1-221ENST00000543162 MT4P47944 62 aa3.18□□□□□ -1.9
DDB1-221ENST00000543162 KRTAP12-4P60329 112 aa3.17□□□□□ -1.9
DDB1-221ENST00000543162 SYNE1Q8NF91 8797 aaKnown RBP3.08□□□□□ -1.92
DDB1-221ENST00000543162 KRTAP20-2Q3LI61 65 aa3.06□□□□□ -1.92
DDB1-221ENST00000543162 KRTAP5-3Q6L8H2 238 aa3.06□□□□□ -1.92
DDB1-221ENST00000543162 HMCN1Q96RW7 5635 aa3.04□□□□□ -1.92
DDB1-221ENST00000543162 KRTAP6-2Q3LI66 62 aa2.99□□□□□ -1.93
DDB1-221ENST00000543162 MT3P25713 68 aa2.96□□□□□ -1.94
DDB1-221ENST00000543162 KRTAP5-2Q701N4 177 aa2.93□□□□□ -1.94
DDB1-221ENST00000543162 AHNAK2Q8IVF2 5795 aa2.77□□□□□ -1.97
DDB1-221ENST00000543162 LCE3DQ9BYE3 92 aa2.74□□□□□ -1.97
DDB1-221ENST00000543162 KRTAP5-10Q6L8G5 202 aa2.69□□□□□ -1.98
DDB1-221ENST00000543162 OBSCNQ5VST9 7968 aa2.65□□□□□ -1.98
DDB1-221ENST00000543162 LCE3EQ5T5B0 92 aa2.65□□□□□ -1.99
DDB1-221ENST00000543162 GPR98Q8WXG9 6306 aa2.64□□□□□ -1.99
DDB1-221ENST00000543162 LCE1EQ5T753 118 aa2.6□□□□□ -1.99
DDB1-221ENST00000543162 KRTAP5-8O75690 187 aa2.59□□□□□ -1.99
DDB1-221ENST00000543162 KRTAP5-1Q6L8H4 278 aa2.55□□□□□ -2
DDB1-221ENST00000543162 KRTAP5-7Q6L8G8 165 aa2.53□□□□□ -2
DDB1-221ENST00000543162 LCE1BQ5T7P3 118 aa2.45□□□□□ -2.02
DDB1-221ENST00000543162 MUC5ACP98088 5654 aa2.42□□□□□ -2.02
DDB1-221ENST00000543162 LCE1CQ5T751 118 aa2.41□□□□□ -2.02
DDB1-221ENST00000543162 LCE1FQ5T754 118 aa2.39□□□□□ -2.03
DDB1-221ENST00000543162 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.29□□□□□ -2.04
DDB1-221ENST00000543162 PRM1P04553 51 aa2.23□□□□□ -2.05
DDB1-221ENST00000543162 MUC5BQ9HC84 5762 aaPredicted RBP2.21□□□□□ -2.06
DDB1-221ENST00000543162 KRTAP5-11Q6L8G4 156 aa2.19□□□□□ -2.06
DDB1-221ENST00000543162 AHNAKQ09666 5890 aaKnown RBP2.16□□□□□ -2.06
DDB1-221ENST00000543162 KRTAP21-2Q3LI59 83 aa2.1□□□□□ -2.07
DDB1-221ENST00000543162 KRTAP4-4Q9BYR3 166 aa1.9□□□□□ -2.11
DDB1-221ENST00000543162 PHGR1C9JFL3 82 aa1.84□□□□□ -2.11
DDB1-221ENST00000543162 MUC19Q7Z5P9 8384 aa1.59□□□□□ -2.15
DDB1-221ENST00000543162 KRTAP21-1Q3LI58 79 aa1.33□□□□□ -2.2
DDB1-221ENST00000543162 MUC16Q8WXI7 14507 aa1.16□□□□□ -2.22
Retrieved 78 of 20,778 RNA–protein pairs in 114.2 ms