RNA–Protein interactions for RNA: ENST00000542772.1

ABCF1-207, Transcript of ATP binding cassette subfamily F member 1, humanhuman

TSL 3

Gene ABCF1, Length 223 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF1-207ENST00000542772 SPRR2EP22531 72 aa2.12□□□□□ -2.07
ABCF1-207ENST00000542772 SPRR2BP35325 72 aa2.12□□□□□ -2.07
ABCF1-207ENST00000542772 SPRR2AP35326 72 aa2.12□□□□□ -2.07
ABCF1-207ENST00000542772 KRTAP12-3P60328 96 aa2.12□□□□□ -2.07
ABCF1-207ENST00000542772 MT1GP13640 62 aa2.11□□□□□ -2.07
ABCF1-207ENST00000542772 LCE5AQ5TCM9 118 aa2.11□□□□□ -2.07
ABCF1-207ENST00000542772 KRTAP19-3Q7Z4W3 81 aa2.11□□□□□ -2.07
ABCF1-207ENST00000542772 MDN1Q9NU22 5596 aa2.11□□□□□ -2.07
ABCF1-207ENST00000542772 KRTAP19-4Q3LI73 84 aa2.1□□□□□ -2.07
ABCF1-207ENST00000542772 MT1LQ93083 61 aa2.1□□□□□ -2.07
ABCF1-207ENST00000542772 KRTAP15-1Q3LI76 137 aa2.09□□□□□ -2.07
ABCF1-207ENST00000542772 H3BS24 57 aa2.05□□□□□ -2.08
ABCF1-207ENST00000542772 KRTAP2-3P0C7H8 128 aa2.04□□□□□ -2.08
ABCF1-207ENST00000542772 SPRR2DP22532 72 aa2.04□□□□□ -2.08
ABCF1-207ENST00000542772 MT1MQ8N339 61 aa2.04□□□□□ -2.08
ABCF1-207ENST00000542772 KRTAP2-4Q9BYR9 128 aa2.04□□□□□ -2.08
ABCF1-207ENST00000542772 DSTQ03001 7570 aaKnown RBP2.03□□□□□ -2.09
ABCF1-207ENST00000542772 NDUFAF8A1L188 74 aa2.02□□□□□ -2.09
ABCF1-207ENST00000542772 LUZP6Q538Z0 58 aa2.02□□□□□ -2.09
ABCF1-207ENST00000542772 KRTAP20-1Q3LI63 56 aa2.01□□□□□ -2.09
ABCF1-207ENST00000542772 LCE3CQ5T5A8 94 aa1.99□□□□□ -2.09
ABCF1-207ENST00000542772 LCE3BQ5TA77 95 aa1.99□□□□□ -2.09
ABCF1-207ENST00000542772 KRTAP4-7Q9BYR0 210 aa1.99□□□□□ -2.09
ABCF1-207ENST00000542772 KRTAP2-2Q9BYT5 123 aa1.99□□□□□ -2.09
ABCF1-207ENST00000542772 KRTAP2-1Q9BYU5 128 aa1.99□□□□□ -2.09
ABCF1-207ENST00000542772 KRTAP4-3Q9BYR4 195 aa1.97□□□□□ -2.09
ABCF1-207ENST00000542772 SPRR5A0A1B0GTR4 108 aa1.92□□□□□ -2.1
ABCF1-207ENST00000542772 A0A0A0MQY5 61 aa1.88□□□□□ -2.11
ABCF1-207ENST00000542772 KRTAP5-4Q6L8H1 288 aa1.88□□□□□ -2.11
ABCF1-207ENST00000542772 KRTAP5-5Q701N2 237 aaPredicted RBP1.88□□□□□ -2.11
ABCF1-207ENST00000542772 LOC100996750A0A140TA64 210 aa1.87□□□□□ -2.11
ABCF1-207ENST00000542772 KRTAP9-6A8MVA2 160 aa1.87□□□□□ -2.11
ABCF1-207ENST00000542772 LCE4AQ5TA78 99 aa1.87□□□□□ -2.11
ABCF1-207ENST00000542772 SYNE1Q8NF91 8797 aaKnown RBP1.82□□□□□ -2.12
ABCF1-207ENST00000542772 KRTAP4-9Q9BYQ8 210 aa1.8□□□□□ -2.12
ABCF1-207ENST00000542772 LCE1DQ5T752 114 aa1.79□□□□□ -2.12
ABCF1-207ENST00000542772 MT1AP04731 61 aa1.78□□□□□ -2.12
ABCF1-207ENST00000542772 KRTAP4-6Q9BYQ5 205 aa1.77□□□□□ -2.13
ABCF1-207ENST00000542772 MT4P47944 62 aa1.76□□□□□ -2.13
ABCF1-207ENST00000542772 KRTAP12-4P60329 112 aa1.76□□□□□ -2.13
ABCF1-207ENST00000542772 KRTAP6-1Q3LI64 71 aa1.76□□□□□ -2.13
ABCF1-207ENST00000542772 HMCN1Q96RW7 5635 aa1.76□□□□□ -2.13
ABCF1-207ENST00000542772 KRTAP20-2Q3LI61 65 aa1.73□□□□□ -2.13
ABCF1-207ENST00000542772 KRTAP9-4Q9BYQ2 154 aa1.73□□□□□ -2.13
ABCF1-207ENST00000542772 INE1O15225 51 aa1.72□□□□□ -2.13
ABCF1-207ENST00000542772 KRTAP5-3Q6L8H2 238 aa1.71□□□□□ -2.14
ABCF1-207ENST00000542772 GPR98Q8WXG9 6306 aa1.69□□□□□ -2.14
ABCF1-207ENST00000542772 KRTAP5-2Q701N4 177 aa1.68□□□□□ -2.14
ABCF1-207ENST00000542772 KRTAP6-2Q3LI66 62 aa1.64□□□□□ -2.15
ABCF1-207ENST00000542772 MT3P25713 68 aa1.63□□□□□ -2.15
ABCF1-207ENST00000542772 AHNAK2Q8IVF2 5795 aa1.63□□□□□ -2.15
ABCF1-207ENST00000542772 KRTAP5-10Q6L8G5 202 aa1.59□□□□□ -2.15
ABCF1-207ENST00000542772 OBSCNQ5VST9 7968 aa1.56□□□□□ -2.16
ABCF1-207ENST00000542772 KRTAP4-11Q9BYQ6 195 aa1.54□□□□□ -2.16
ABCF1-207ENST00000542772 KRTAP5-7Q6L8G8 165 aa1.51□□□□□ -2.17
ABCF1-207ENST00000542772 KRTAP5-8O75690 187 aa1.5□□□□□ -2.17
ABCF1-207ENST00000542772 LCE1EQ5T753 118 aa1.49□□□□□ -2.17
ABCF1-207ENST00000542772 KRTAP5-1Q6L8H4 278 aa1.47□□□□□ -2.17
ABCF1-207ENST00000542772 LCE3DQ9BYE3 92 aa1.46□□□□□ -2.18
ABCF1-207ENST00000542772 LCE3EQ5T5B0 92 aa1.41□□□□□ -2.18
ABCF1-207ENST00000542772 LCE1CQ5T751 118 aa1.38□□□□□ -2.19
ABCF1-207ENST00000542772 LCE1BQ5T7P3 118 aa1.38□□□□□ -2.19
ABCF1-207ENST00000542772 KRTAP4-2Q9BYR5 136 aa1.37□□□□□ -2.19
ABCF1-207ENST00000542772 KRTAP9-9Q9BYP9 154 aa1.36□□□□□ -2.19
ABCF1-207ENST00000542772 MUC5ACP98088 5654 aa1.36□□□□□ -2.19
ABCF1-207ENST00000542772 MUC5BQ9HC84 5762 aaPredicted RBP1.34□□□□□ -2.19
ABCF1-207ENST00000542772 AHNAKQ09666 5890 aaKnown RBP1.32□□□□□ -2.2
ABCF1-207ENST00000542772 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.29□□□□□ -2.2
ABCF1-207ENST00000542772 PRM1P04553 51 aa1.23□□□□□ -2.21
ABCF1-207ENST00000542772 KRTAP5-11Q6L8G4 156 aa1.22□□□□□ -2.21
ABCF1-207ENST00000542772 KRTAP4-12Q9BQ66 201 aa1.21□□□□□ -2.22
ABCF1-207ENST00000542772 KRTAP21-2Q3LI59 83 aa1.18□□□□□ -2.22
ABCF1-207ENST00000542772 LCE1FQ5T754 118 aa1.16□□□□□ -2.22
ABCF1-207ENST00000542772 PHGR1C9JFL3 82 aa1.04□□□□□ -2.24
ABCF1-207ENST00000542772 KRTAP4-4Q9BYR3 166 aa1.01□□□□□ -2.25
ABCF1-207ENST00000542772 MUC19Q7Z5P9 8384 aa0.92□□□□□ -2.26
ABCF1-207ENST00000542772 KRTAP21-1Q3LI58 79 aa0.77□□□□□ -2.29
ABCF1-207ENST00000542772 MUC16Q8WXI7 14507 aa0.68□□□□□ -2.3
Retrieved 78 of 20,778 RNA–protein pairs in 12.7 ms