RNA–Protein interactions for RNA: ENST00000541549.2

EIF3A-203, Transcript of eukaryotic translation initiation factor 3 subunit A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene EIF3A, Length 4,495 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EIF3A-203ENST00000541549 KRTAP19-3Q7Z4W3 81 aa3.84□□□□□ -1.79
EIF3A-203ENST00000541549 FAT4Q6V0I7 4981 aa3.83□□□□□ -1.8
EIF3A-203ENST00000541549 RNF213Q63HN8 5207 aa3.83□□□□□ -1.8
EIF3A-203ENST00000541549 LOC100996750A0A140TA64 210 aa3.79□□□□□ -1.8
EIF3A-203ENST00000541549 KRTAP4-3Q9BYR4 195 aa3.76□□□□□ -1.81
EIF3A-203ENST00000541549 FCGBPQ9Y6R7 5405 aaPredicted RBP3.73□□□□□ -1.81
EIF3A-203ENST00000541549 SPRR2DP22532 72 aa3.73□□□□□ -1.81
EIF3A-203ENST00000541549 MT1MQ8N339 61 aa3.72□□□□□ -1.81
EIF3A-203ENST00000541549 KRTAP19-7Q3SYF9 63 aa3.71□□□□□ -1.82
EIF3A-203ENST00000541549 PRM1P04553 51 aa3.68□□□□□ -1.82
EIF3A-203ENST00000541549 DSTQ03001 7570 aaKnown RBP3.68□□□□□ -1.82
EIF3A-203ENST00000541549 KRTAP2-3P0C7H8 128 aa3.62□□□□□ -1.83
EIF3A-203ENST00000541549 KRTAP2-4Q9BYR9 128 aa3.62□□□□□ -1.83
EIF3A-203ENST00000541549 KRTAP2-1Q9BYU5 128 aa3.62□□□□□ -1.83
EIF3A-203ENST00000541549 KRTAP9-6A8MVA2 160 aa3.61□□□□□ -1.83
EIF3A-203ENST00000541549 KRTAP4-9Q9BYQ8 210 aa3.6□□□□□ -1.83
EIF3A-203ENST00000541549 SYNE2Q8WXH0 6885 aaKnown RBP3.57□□□□□ -1.84
EIF3A-203ENST00000541549 KRTAP19-6Q3LI70 58 aa3.54□□□□□ -1.84
EIF3A-203ENST00000541549 MT3P25713 68 aa3.54□□□□□ -1.84
EIF3A-203ENST00000541549 USH2AO75445 5202 aa3.51□□□□□ -1.85
EIF3A-203ENST00000541549 KMT2DO14686 5537 aa3.49□□□□□ -1.85
EIF3A-203ENST00000541549 LCE2AQ5TA79 106 aaPredicted RBP3.46□□□□□ -1.86
EIF3A-203ENST00000541549 LCE2DQ5TA82 110 aaPredicted RBP3.44□□□□□ -1.86
EIF3A-203ENST00000541549 MT1AP04731 61 aa3.43□□□□□ -1.86
EIF3A-203ENST00000541549 MT4P47944 62 aa3.4□□□□□ -1.86
EIF3A-203ENST00000541549 LCE1BQ5T7P3 118 aa3.36□□□□□ -1.87
EIF3A-203ENST00000541549 LCE1DQ5T752 114 aa3.36□□□□□ -1.87
EIF3A-203ENST00000541549 MACF1Q9UPN3 7388 aaKnown RBP3.34□□□□□ -1.87
EIF3A-203ENST00000541549 KRTAP6-1Q3LI64 71 aa3.33□□□□□ -1.88
EIF3A-203ENST00000541549 KRTAP9-7A8MTY7 169 aa3.27□□□□□ -1.89
EIF3A-203ENST00000541549 KRTAP6-2Q3LI66 62 aa3.27□□□□□ -1.89
EIF3A-203ENST00000541549 MUC19Q7Z5P9 8384 aa3.27□□□□□ -1.89
EIF3A-203ENST00000541549 KRTAP9-2Q9BYQ4 174 aa3.24□□□□□ -1.89
EIF3A-203ENST00000541549 LCE5AQ5TCM9 118 aa3.23□□□□□ -1.89
EIF3A-203ENST00000541549 MUC12Q9UKN1 5478 aa3.22□□□□□ -1.89
EIF3A-203ENST00000541549 KRTAP9-4Q9BYQ2 154 aa3.13□□□□□ -1.91
EIF3A-203ENST00000541549 LCE1AQ5T7P2 110 aa3.09□□□□□ -1.91
EIF3A-203ENST00000541549 SSPOA2VEC9 5147 aa3.09□□□□□ -1.91
EIF3A-203ENST00000541549 MDN1Q9NU22 5596 aa2.99□□□□□ -1.93
EIF3A-203ENST00000541549 KRTAP2-2Q9BYT5 123 aa2.96□□□□□ -1.94
EIF3A-203ENST00000541549 KRTAP6-3Q3LI67 103 aa2.88□□□□□ -1.95
EIF3A-203ENST00000541549 KRTAP9-6A0A140TA67 174 aa2.88□□□□□ -1.95
EIF3A-203ENST00000541549 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.81□□□□□ -1.96
EIF3A-203ENST00000541549 LCE4AQ5TA78 99 aa2.81□□□□□ -1.96
EIF3A-203ENST00000541549 KRTAP4-11Q9BYQ6 195 aa2.76□□□□□ -1.97
EIF3A-203ENST00000541549 KRTAP20-1Q3LI63 56 aa2.76□□□□□ -1.97
EIF3A-203ENST00000541549 LCE1CQ5T751 118 aa2.71□□□□□ -1.98
EIF3A-203ENST00000541549 LCE1EQ5T753 118 aa2.71□□□□□ -1.98
EIF3A-203ENST00000541549 LCE1FQ5T754 118 aa2.71□□□□□ -1.98
EIF3A-203ENST00000541549 KRTAP5-5Q701N2 237 aaPredicted RBP2.68□□□□□ -1.98
EIF3A-203ENST00000541549 KRTAP4-6Q9BYQ5 205 aa2.66□□□□□ -1.98
EIF3A-203ENST00000541549 KRTAP5-9P26371 169 aa2.64□□□□□ -1.99
EIF3A-203ENST00000541549 NEBP20929 6669 aa2.64□□□□□ -1.99
EIF3A-203ENST00000541549 KRTAP20-2Q3LI61 65 aa2.55□□□□□ -2
EIF3A-203ENST00000541549 MUC5ACP98088 5654 aa2.53□□□□□ -2
EIF3A-203ENST00000541549 GPR98Q8WXG9 6306 aa2.5□□□□□ -2.01
EIF3A-203ENST00000541549 KRTAP4-4Q9BYR3 166 aa2.47□□□□□ -2.01
EIF3A-203ENST00000541549 HMCN1Q96RW7 5635 aa2.46□□□□□ -2.02
EIF3A-203ENST00000541549 KRTAP9-9Q9BYP9 154 aa2.38□□□□□ -2.03
EIF3A-203ENST00000541549 KRTAP4-12Q9BQ66 201 aa2.34□□□□□ -2.03
EIF3A-203ENST00000541549 KRTAP4-2Q9BYR5 136 aa2.34□□□□□ -2.03
EIF3A-203ENST00000541549 KRTAP5-4Q6L8H1 288 aa2.23□□□□□ -2.05
EIF3A-203ENST00000541549 AHNAK2Q8IVF2 5795 aa2.18□□□□□ -2.06
EIF3A-203ENST00000541549 KRTAP5-10Q6L8G5 202 aa2.09□□□□□ -2.08
EIF3A-203ENST00000541549 KRTAP5-3Q6L8H2 238 aa1.97□□□□□ -2.09
EIF3A-203ENST00000541549 KRTAP5-2Q701N4 177 aa1.97□□□□□ -2.09
EIF3A-203ENST00000541549 KRTAP5-8O75690 187 aa1.87□□□□□ -2.11
EIF3A-203ENST00000541549 AHNAKQ09666 5890 aaKnown RBP1.79□□□□□ -2.12
EIF3A-203ENST00000541549 KRTAP5-1Q6L8H4 278 aa1.79□□□□□ -2.12
EIF3A-203ENST00000541549 MUC5BQ9HC84 5762 aaPredicted RBP1.79□□□□□ -2.12
EIF3A-203ENST00000541549 KRTAP21-2Q3LI59 83 aa1.75□□□□□ -2.13
EIF3A-203ENST00000541549 KRTAP5-11Q6L8G4 156 aa1.7□□□□□ -2.14
EIF3A-203ENST00000541549 KRTAP21-1Q3LI58 79 aa1.65□□□□□ -2.14
EIF3A-203ENST00000541549 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.56□□□□□ -2.16
EIF3A-203ENST00000541549 PHGR1C9JFL3 82 aa1.52□□□□□ -2.17
EIF3A-203ENST00000541549 KRTAP5-7Q6L8G8 165 aa1.46□□□□□ -2.18
EIF3A-203ENST00000541549 MUC16Q8WXI7 14507 aa1.03□□□□□ -2.24
Retrieved 77 of 20,778 RNA–protein pairs in 13.5 ms