RNA–Protein interactions for RNA: ENST00000541427.1

KNTC1-211, Transcript of kinetochore associated 1, humanhuman

TSL 2

Gene KNTC1, Length 641 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNTC1-211ENST00000541427 SPATA8Q6RVD6 105 aa1.41□□□□□ -2.18
KNTC1-211ENST00000541427 BRK1Q8WUW1 75 aa1.41□□□□□ -2.18
KNTC1-211ENST00000541427 CDC42SE1Q9NRR8 79 aa1.41□□□□□ -2.18
KNTC1-211ENST00000541427 H0YAA0 97 aa1.4□□□□□ -2.19
KNTC1-211ENST00000541427 LPAP08519 4548 aa1.4□□□□□ -2.19
KNTC1-211ENST00000541427 KRTAP13-4Q3LI77 160 aa1.39□□□□□ -2.19
KNTC1-211ENST00000541427 S4R3F8 94 aa1.39□□□□□ -2.19
KNTC1-211ENST00000541427 UQCR11O14957 56 aa1.38□□□□□ -2.19
KNTC1-211ENST00000541427 A6NN06 94 aa1.37□□□□□ -2.19
KNTC1-211ENST00000541427 MIR22HGQ0VDD5 57 aa1.36□□□□□ -2.19
KNTC1-211ENST00000541427 CSAG1Q6PB30 78 aa1.36□□□□□ -2.19
KNTC1-211ENST00000541427 A0A1B0GU33 70 aa1.35□□□□□ -2.19
KNTC1-211ENST00000541427 UBR4Q5T4S7 5183 aa1.34□□□□□ -2.19
KNTC1-211ENST00000541427 RNF213Q63HN8 5207 aa1.34□□□□□ -2.19
KNTC1-211ENST00000541427 M0QZ58 72 aa1.33□□□□□ -2.2
KNTC1-211ENST00000541427 FAT4Q6V0I7 4981 aa1.31□□□□□ -2.2
KNTC1-211ENST00000541427 MT1HP80294 61 aa1.31□□□□□ -2.2
KNTC1-211ENST00000541427 FLGP20930 4061 aaPredicted RBP1.3□□□□□ -2.2
KNTC1-211ENST00000541427 ROMO1P60602 79 aa1.3□□□□□ -2.2
KNTC1-211ENST00000541427 CRIPTQ9P021 101 aa1.3□□□□□ -2.2
KNTC1-211ENST00000541427 MUC2Q02817 5179 aa1.28□□□□□ -2.2
KNTC1-211ENST00000541427 MT2AP02795 61 aa1.28□□□□□ -2.2
KNTC1-211ENST00000541427 SPRR2GQ9BYE4 73 aa1.28□□□□□ -2.2
KNTC1-211ENST00000541427 MT1FP04733 61 aa1.26□□□□□ -2.21
KNTC1-211ENST00000541427 A0A0D9SG42 100 aa1.25□□□□□ -2.21
KNTC1-211ENST00000541427 KRTAP19-8Q3LI54 63 aa1.25□□□□□ -2.21
KNTC1-211ENST00000541427 PRO2289Q9P1D8 64 aa1.24□□□□□ -2.21
KNTC1-211ENST00000541427 C10orf95Q9H7T3 257 aa1.23□□□□□ -2.21
KNTC1-211ENST00000541427 MT1BP07438 61 aa1.22□□□□□ -2.21
KNTC1-211ENST00000541427 M0R2T5 61 aa1.21□□□□□ -2.22
KNTC1-211ENST00000541427 MT1XP80297 61 aa1.18□□□□□ -2.22
KNTC1-211ENST00000541427 PLAC4Q8WY50 150 aa1.17□□□□□ -2.22
KNTC1-211ENST00000541427 TNP1P09430 55 aa1.16□□□□□ -2.22
KNTC1-211ENST00000541427 USH2AO75445 5202 aa1.14□□□□□ -2.23
KNTC1-211ENST00000541427 KRTAP8-1Q8IUC2 63 aa1.14□□□□□ -2.23
KNTC1-211ENST00000541427 KRTAP19-6Q3LI70 58 aa1.12□□□□□ -2.23
KNTC1-211ENST00000541427 SSPOA2VEC9 5147 aa1.12□□□□□ -2.23
KNTC1-211ENST00000541427 INE1O15225 51 aa1.11□□□□□ -2.23
KNTC1-211ENST00000541427 KRTAP19-7Q3SYF9 63 aa1.07□□□□□ -2.24
KNTC1-211ENST00000541427 KRTAP19-5Q3LI72 72 aa1.05□□□□□ -2.24
KNTC1-211ENST00000541427 MT1EP04732 61 aa1.04□□□□□ -2.24
KNTC1-211ENST00000541427 MT1LQ93083 61 aa1.02□□□□□ -2.25
KNTC1-211ENST00000541427 FSIP2Q5CZC0 6907 aa0.98□□□□□ -2.25
KNTC1-211ENST00000541427 MT1GP13640 62 aa0.98□□□□□ -2.25
KNTC1-211ENST00000541427 KRTAP5-10Q6L8G5 202 aa0.98□□□□□ -2.25
KNTC1-211ENST00000541427 KRTAP19-3Q7Z4W3 81 aa0.98□□□□□ -2.25
KNTC1-211ENST00000541427 KMT2DO14686 5537 aa0.98□□□□□ -2.25
KNTC1-211ENST00000541427 MT1MQ8N339 61 aa0.97□□□□□ -2.25
KNTC1-211ENST00000541427 MACF1Q9UPN3 7388 aaKnown RBP0.95□□□□□ -2.26
KNTC1-211ENST00000541427 KRTAP2-3P0C7H8 128 aa0.94□□□□□ -2.26
KNTC1-211ENST00000541427 SPRR2FQ96RM1 72 aa0.94□□□□□ -2.26
KNTC1-211ENST00000541427 KRTAP2-4Q9BYR9 128 aa0.94□□□□□ -2.26
KNTC1-211ENST00000541427 KRTAP2-1Q9BYU5 128 aa0.94□□□□□ -2.26
KNTC1-211ENST00000541427 MUC12Q9UKN1 5478 aa0.92□□□□□ -2.26
KNTC1-211ENST00000541427 MUC16Q8WXI7 14507 aa0.91□□□□□ -2.26
KNTC1-211ENST00000541427 SYNE2Q8WXH0 6885 aaKnown RBP0.9□□□□□ -2.27
KNTC1-211ENST00000541427 MT1AP04731 61 aa0.88□□□□□ -2.27
KNTC1-211ENST00000541427 SPRR2EP22531 72 aa0.88□□□□□ -2.27
KNTC1-211ENST00000541427 SPRR2BP35325 72 aa0.88□□□□□ -2.27
KNTC1-211ENST00000541427 SPRR2AP35326 72 aa0.88□□□□□ -2.27
KNTC1-211ENST00000541427 NEBP20929 6669 aa0.87□□□□□ -2.27
KNTC1-211ENST00000541427 SPRR2DP22532 72 aa0.86□□□□□ -2.27
KNTC1-211ENST00000541427 MDN1Q9NU22 5596 aa0.86□□□□□ -2.27
KNTC1-211ENST00000541427 KRTAP6-1Q3LI64 71 aa0.85□□□□□ -2.27
KNTC1-211ENST00000541427 SYNE1Q8NF91 8797 aaKnown RBP0.81□□□□□ -2.28
KNTC1-211ENST00000541427 DSTQ03001 7570 aaKnown RBP0.8□□□□□ -2.28
KNTC1-211ENST00000541427 AHNAK2Q8IVF2 5795 aa0.77□□□□□ -2.29
KNTC1-211ENST00000541427 KRTAP20-2Q3LI61 65 aa0.76□□□□□ -2.29
KNTC1-211ENST00000541427 KRTAP20-1Q3LI63 56 aa0.76□□□□□ -2.29
KNTC1-211ENST00000541427 KRTAP6-2Q3LI66 62 aa0.76□□□□□ -2.29
KNTC1-211ENST00000541427 MT4P47944 62 aa0.71□□□□□ -2.3
KNTC1-211ENST00000541427 PRM1P04553 51 aa0.65□□□□□ -2.31
KNTC1-211ENST00000541427 MUC5ACP98088 5654 aa0.61□□□□□ -2.31
KNTC1-211ENST00000541427 GPR98Q8WXG9 6306 aa0.54□□□□□ -2.32
KNTC1-211ENST00000541427 MUC5BQ9HC84 5762 aaPredicted RBP0.54□□□□□ -2.32
KNTC1-211ENST00000541427 AHNAKQ09666 5890 aaKnown RBP0.48□□□□□ -2.33
KNTC1-211ENST00000541427 PHGR1C9JFL3 82 aa0.48□□□□□ -2.33
KNTC1-211ENST00000541427 KRTAP21-1Q3LI58 79 aa0.44□□□□□ -2.34
Retrieved 78 of 20,778 RNA–protein pairs in 13.1 ms